{"id":"https://openalex.org/W2071463325","doi":"https://doi.org/10.1109/mmbia.2012.6164740","title":"Building spatiotemporal anatomical models using joint 4-D segmentation, registration, and subject-specific atlas estimation","display_name":"Building spatiotemporal anatomical models using joint 4-D segmentation, registration, and subject-specific atlas estimation","publication_year":2012,"publication_date":"2012-01-01","ids":{"openalex":"https://openalex.org/W2071463325","doi":"https://doi.org/10.1109/mmbia.2012.6164740","mag":"2071463325","pmid":"https://pubmed.ncbi.nlm.nih.gov/23568185"},"language":"en","primary_location":{"id":"doi:10.1109/mmbia.2012.6164740","is_oa":false,"landing_page_url":"https://doi.org/10.1109/mmbia.2012.6164740","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 IEEE Workshop on Mathematical Methods in Biomedical Image Analysis","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3615562","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5071251239","display_name":"Marcel Prastawa","orcid":"https://orcid.org/0000-0002-0278-9637"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Marcel Prastawa","raw_affiliation_strings":["Scientific Computing and Imaging (SCI) Institute, University of Utah, USA","[Scientific Computing and Imaging SCI Institute, University of Utah, USA]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Scientific Computing and Imaging (SCI) Institute, University of Utah, USA","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"[Scientific Computing and Imaging SCI Institute, University of Utah, USA]","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017642893","display_name":"Suyash P. Awate","orcid":"https://orcid.org/0000-0002-4945-9539"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Suyash P. Awate","raw_affiliation_strings":["Scientific Computing and Imaging (SCI) Institute, University of Utah, USA","[Scientific Computing and Imaging SCI Institute, University of Utah, USA]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Scientific Computing and Imaging (SCI) Institute, University of Utah, USA","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"[Scientific Computing and Imaging SCI Institute, University of Utah, USA]","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5010769610","display_name":"Guido Gerig","orcid":"https://orcid.org/0000-0002-9547-6233"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Guido Gerig","raw_affiliation_strings":["Scientific Computing and Imaging (SCI) Institute, University of Utah, USA","[Scientific Computing and Imaging SCI Institute, University of Utah, USA]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Scientific Computing and Imaging (SCI) Institute, University of Utah, USA","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"[Scientific Computing and Imaging SCI Institute, University of Utah, USA]","institution_ids":["https://openalex.org/I223532165"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I223532165"],"apc_list":null,"apc_paid":null,"fwci":4.5188,"has_fulltext":false,"cited_by_count":11,"citation_normalized_percentile":{"value":0.94868106,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"49","last_page":"56"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T14510","display_name":"Medical Imaging and Analysis","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T14510","display_name":"Medical Imaging and Analysis","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.7917514443397522},{"id":"https://openalex.org/keywords/atlas","display_name":"Atlas (anatomy)","score":0.7240549325942993},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7124801874160767},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6678518652915955},{"id":"https://openalex.org/keywords/image-registration","display_name":"Image registration","score":0.6088475584983826},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.5893263220787048},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.5871409177780151},{"id":"https://openalex.org/keywords/magnetic-resonance-imaging","display_name":"Magnetic resonance imaging","score":0.471910297870636},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4247155785560608},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.26357606053352356}],"concepts":[{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.7917514443397522},{"id":"https://openalex.org/C2776673561","wikidata":"https://www.wikidata.org/wiki/Q655357","display_name":"Atlas (anatomy)","level":2,"score":0.7240549325942993},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7124801874160767},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6678518652915955},{"id":"https://openalex.org/C166704113","wikidata":"https://www.wikidata.org/wiki/Q861092","display_name":"Image registration","level":3,"score":0.6088475584983826},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.5893263220787048},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.5871409177780151},{"id":"https://openalex.org/C143409427","wikidata":"https://www.wikidata.org/wiki/Q161238","display_name":"Magnetic resonance imaging","level":2,"score":0.471910297870636},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4247155785560608},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.26357606053352356},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1109/mmbia.2012.6164740","is_oa":false,"landing_page_url":"https://doi.org/10.1109/mmbia.2012.6164740","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 IEEE Workshop on Mathematical Methods in Biomedical Image Analysis","raw_type":"proceedings-article"},{"id":"pmid:23568185","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23568185","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings. Workshop on Mathematical Methods in Biomedical Image Analysis","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.221.5677","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.221.5677","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.sci.utah.edu/%7Eprastawa/papers/MMBIA2012_Prastawa_4DAnatomicalModel.pdf","raw_type":"text"},{"id":"pmh:oai:europepmc.org:2618724","is_oa":false,"landing_page_url":"http://europepmc.org/articles/PMC3615562","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3615562","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3615562","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc Workshop Math Methods Biomed Image Analysis","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:3615562","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3615562","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc Workshop Math Methods Biomed Image Analysis","raw_type":"Text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1131972899","display_name":null,"funder_award_id":"U01 AG024904","funder_id":"https://openalex.org/F4320337337","funder_display_name":"National Institute on Aging"},{"id":"https://openalex.org/G2426551852","display_name":null,"funder_award_id":"P41 GM103545","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G4139504844","display_name":null,"funder_award_id":"R01 HD055741","funder_id":"https://openalex.org/F4320337611","funder_display_name":"Eunice Kennedy Shriver National Institute of Child Health and Human Development"},{"id":"https://openalex.org/G7628412913","display_name":null,"funder_award_id":"P41 RR012553","funder_id":"https://openalex.org/F4320337375","funder_display_name":"National Center for Research Resources"},{"id":"https://openalex.org/G7639340818","display_name":null,"funder_award_id":"U54 EB005149","funder_id":"https://openalex.org/F4320337363","funder_display_name":"National Institute of Biomedical Imaging and Bioengineering"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337337","display_name":"National Institute on Aging","ror":"https://ror.org/049v75w11"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320337363","display_name":"National Institute of Biomedical Imaging and Bioengineering","ror":"https://ror.org/00372qc85"},{"id":"https://openalex.org/F4320337375","display_name":"National Center for Research Resources","ror":"https://ror.org/04pw6fb54"},{"id":"https://openalex.org/F4320337611","display_name":"Eunice Kennedy Shriver National Institute of Child Health and Human Development","ror":"https://ror.org/04byxyr05"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":19,"referenced_works":["https://openalex.org/W1698856871","https://openalex.org/W1853548787","https://openalex.org/W2013930726","https://openalex.org/W2014173354","https://openalex.org/W2024524081","https://openalex.org/W2034372240","https://openalex.org/W2048700485","https://openalex.org/W2050687114","https://openalex.org/W2067817931","https://openalex.org/W2096014415","https://openalex.org/W2123402141","https://openalex.org/W2132029469","https://openalex.org/W2134589316","https://openalex.org/W2153119123","https://openalex.org/W2170167891","https://openalex.org/W2737236097","https://openalex.org/W4230920194","https://openalex.org/W6637483349","https://openalex.org/W6741767146"],"related_works":["https://openalex.org/W2314146950","https://openalex.org/W2011187995","https://openalex.org/W2373521488","https://openalex.org/W2324878645","https://openalex.org/W2803101231","https://openalex.org/W4284509","https://openalex.org/W4393084406","https://openalex.org/W606911313","https://openalex.org/W1990901612","https://openalex.org/W1522196789"],"abstract_inverted_index":{"Longitudinal":[0],"analysis":[1,163],"of":[2,41,86,164],"anatomical":[3,27,77,165],"changes":[4,28,166],"is":[5,38],"a":[6,69,83,110],"vital":[7],"component":[8],"in":[9,29,44],"many":[10],"personalized-medicine":[11],"applications":[12],"for":[13,73,120],"predicting":[14],"disease":[15,21],"onset,":[16],"determining":[17],"growth/atrophy":[18],"patterns,":[19],"evaluating":[20],"progression,":[22],"and":[23,49,56,90,125,136],"monitoring":[24],"recovery.":[25],"Estimating":[26],"longitudinal":[30,76,103,134,139],"studies,":[31],"especially":[32],"through":[33],"magnetic":[34],"resonance":[35],"(MR)":[36],"images,":[37,99],"challenging":[39],"because":[40],"temporal":[42],"variability":[43],"shape":[45],"(e.g.":[46,51],"from":[47,63,153],"growth/atrophy)":[48],"appearance":[50],"due":[52],"to":[53,157],"imaging":[54],"parameters":[55],"tissue":[57],"properties":[58],"affecting":[59],"intensity":[60],"contrast,":[61],"or":[62],"scanner":[64],"calibration).":[65],"This":[66,128],"paper":[67,129],"proposes":[68],"novel":[70,111],"mathematical":[71],"framework":[72,108,149],"constructing":[74],"subject-specific":[75,91],"models.":[78],"The":[79,106,143],"proposed":[80,107,148],"method":[81],"solves":[82],"generalized":[84],"problem":[85],"joint":[87],"segmentation,":[88,122],"registration,":[89,124],"atlas":[92,126],"building,":[93],"which":[94],"involves":[95],"not":[96],"just":[97],"two":[98],"but":[100],"an":[101],"entire":[102],"image":[104,121,123],"sequence.":[105],"describes":[109],"approach":[112],"that":[113,117,146,161],"integrates":[114,151],"fundamental":[115],"principles":[116],"underpin":[118],"methods":[119],"construction.":[127],"presents":[130],"evaluation":[131],"on":[132,137],"simulated":[133],"data":[135,156],"clinical":[138],"brain":[140],"MRI":[141],"data.":[142],"results":[144],"demonstrate":[145],"the":[147],"effectively":[150],"information":[152],"4-D":[154],"spatiotemporal":[155,159],"generate":[158],"models":[160],"allow":[162],"over":[167],"time.":[168]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}