{"id":"https://openalex.org/W2023435398","doi":"https://doi.org/10.1109/mcg.2012.64","title":"A Practical Workflow for Making Anatomical Atlases for Biological Research","display_name":"A Practical Workflow for Making Anatomical Atlases for Biological Research","publication_year":2012,"publication_date":"2012-05-24","ids":{"openalex":"https://openalex.org/W2023435398","doi":"https://doi.org/10.1109/mcg.2012.64","mag":"2023435398","pmid":"https://pubmed.ncbi.nlm.nih.gov/24347787"},"language":"en","primary_location":{"id":"doi:10.1109/mcg.2012.64","is_oa":false,"landing_page_url":"https://doi.org/10.1109/mcg.2012.64","pdf_url":null,"source":{"id":"https://openalex.org/S105380075","display_name":"IEEE Computer Graphics and Applications","issn_l":"0272-1716","issn":["0272-1716","1558-1756"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Computer Graphics and Applications","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3859313","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063468572","display_name":"Yong Wan","orcid":"https://orcid.org/0000-0002-2519-0758"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Yong Wan","raw_affiliation_strings":["University of Utah, USA","University of Utah, Salt Lake City, UT, USA#TAB#"],"affiliations":[{"raw_affiliation_string":"University of Utah, USA","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"University of Utah, Salt Lake City, UT, USA#TAB#","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026274276","display_name":"A. Kelsey Lewis","orcid":null},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"A. Kelsey Lewis","raw_affiliation_strings":["University of Utah, USA","University of Utah, Salt Lake City, UT, USA#TAB#"],"affiliations":[{"raw_affiliation_string":"University of Utah, USA","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"University of Utah, Salt Lake City, UT, USA#TAB#","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034851062","display_name":"Mary Colasanto","orcid":null},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mary Colasanto","raw_affiliation_strings":["University of Utah, USA","University of Utah, Salt Lake City, UT, USA#TAB#"],"affiliations":[{"raw_affiliation_string":"University of Utah, USA","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"University of Utah, Salt Lake City, UT, USA#TAB#","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030719766","display_name":"Mark van Langeveld","orcid":null},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mark van Langeveld","raw_affiliation_strings":["University of Utah, USA","University of Utah, Salt Lake City, UT, USA#TAB#"],"affiliations":[{"raw_affiliation_string":"University of Utah, USA","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"University of Utah, Salt Lake City, UT, USA#TAB#","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079202548","display_name":"Gabrielle Kardon","orcid":"https://orcid.org/0000-0003-2144-4463"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gabrielle Kardon","raw_affiliation_strings":["University of Utah, USA","University of Utah, Salt Lake City, UT, USA#TAB#"],"affiliations":[{"raw_affiliation_string":"University of Utah, USA","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"University of Utah, Salt Lake City, UT, USA#TAB#","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5065645994","display_name":"Charles Hansen","orcid":"https://orcid.org/0000-0002-8480-2152"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Charles Hansen","raw_affiliation_strings":["University of Utah, USA","University of Utah, Salt Lake City, UT, USA#TAB#"],"affiliations":[{"raw_affiliation_string":"University of Utah, USA","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"University of Utah, Salt Lake City, UT, USA#TAB#","institution_ids":["https://openalex.org/I223532165"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5063468572"],"corresponding_institution_ids":["https://openalex.org/I223532165"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.09453508,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"32","issue":"5","first_page":"70","last_page":"80"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11984","display_name":"Anatomy and Medical Technology","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11984","display_name":"Anatomy and Medical Technology","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10719","display_name":"3D Shape Modeling and Analysis","score":0.9843000173568726,"subfield":{"id":"https://openalex.org/subfields/2206","display_name":"Computational Mechanics"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9510999917984009,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.9455633163452148},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7497235536575317},{"id":"https://openalex.org/keywords/atlas","display_name":"Atlas (anatomy)","score":0.577375054359436},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5492534041404724},{"id":"https://openalex.org/keywords/quality","display_name":"Quality (philosophy)","score":0.43195927143096924},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.13509929180145264}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.9455633163452148},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7497235536575317},{"id":"https://openalex.org/C2776673561","wikidata":"https://www.wikidata.org/wiki/Q655357","display_name":"Atlas (anatomy)","level":2,"score":0.577375054359436},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5492534041404724},{"id":"https://openalex.org/C2779530757","wikidata":"https://www.wikidata.org/wiki/Q1207505","display_name":"Quality (philosophy)","level":2,"score":0.43195927143096924},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.13509929180145264},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001271","descriptor_name":"Atlases as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001271","descriptor_name":"Atlases as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001271","descriptor_name":"Atlases as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008953","descriptor_name":"Models, Anatomic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008953","descriptor_name":"Models, Anatomic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008953","descriptor_name":"Models, Anatomic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1109/mcg.2012.64","is_oa":false,"landing_page_url":"https://doi.org/10.1109/mcg.2012.64","pdf_url":null,"source":{"id":"https://openalex.org/S105380075","display_name":"IEEE Computer Graphics and Applications","issn_l":"0272-1716","issn":["0272-1716","1558-1756"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Computer Graphics and Applications","raw_type":"journal-article"},{"id":"pmid:24347787","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24347787","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE computer graphics and applications","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:3859313","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3859313","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Comput Graph Appl","raw_type":"Text"},{"id":"pmh:oai:repository.kaust.edu.sa:10754/669876","is_oa":false,"landing_page_url":"http://hdl.handle.net/10754/669876","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:3859313","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3859313","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Comput Graph Appl","raw_type":"Text"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9","score":0.6200000047683716}],"awards":[],"funders":[{"id":"https://openalex.org/F4320310050","display_name":"University of Utah","ror":"https://ror.org/03r0ha626"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":11,"referenced_works":["https://openalex.org/W1535631415","https://openalex.org/W1971920399","https://openalex.org/W2038763636","https://openalex.org/W2083760363","https://openalex.org/W2109558362","https://openalex.org/W2293828611","https://openalex.org/W2501733499","https://openalex.org/W4301721325","https://openalex.org/W6643290799","https://openalex.org/W6660272395","https://openalex.org/W7036501529"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2314146950","https://openalex.org/W2011187995","https://openalex.org/W2373521488","https://openalex.org/W2324878645","https://openalex.org/W2803101231","https://openalex.org/W4284509","https://openalex.org/W4393084406","https://openalex.org/W606911313"],"abstract_inverted_index":{"The":[0],"anatomical":[1,90,143],"atlas":[2,91,105],"has":[3,42],"been":[4,43],"at":[5],"the":[6,71,108,117],"intersection":[7],"of":[8,46,57,119],"science":[9],"and":[10,66,126,132],"art":[11],"for":[12,76,86,106,140],"centuries.":[13],"These":[14],"atlases":[15,23,36,54],"are":[16,24,74],"essential":[17],"to":[18,52,100,115],"biological":[19,58,79],"research,":[20],"but":[21],"high-quality":[22,34,78],"often":[25],"scarce.":[26],"Recent":[27],"advances":[28],"in":[29,70,123],"imaging":[30],"technology":[31],"have":[32,82],"made":[33],"3D":[35,89],"possible.":[37],"However,":[38],"until":[39],"now":[40],"there":[41],"a":[44,84,88,102,138],"lack":[45],"practical":[47,75],"workflows":[48],"using":[49,92,120],"standard":[50],"tools":[51,122],"generate":[53],"from":[55],"images":[56],"samples.":[59],"With":[60],"certain":[61],"adaptations,":[62],"CG":[63],"artists'":[64,94,121],"workflow":[65,85,99,139],"tools,":[67],"traditionally":[68],"used":[69,97],"film":[72],"industry,":[73],"building":[77],"atlases.":[80],"Researchers":[81],"developed":[83],"generating":[87],"accessible":[93],"tools.":[95],"They":[96],"this":[98],"build":[101],"mouse":[103],"limb":[104],"studying":[107],"musculoskeletal":[109],"system's":[110],"development.":[111],"This":[112,134],"research":[113,125],"aims":[114],"raise":[116],"awareness":[118],"scientific":[124],"promote":[127],"interdisciplinary":[128],"collaborations":[129],"between":[130],"artists":[131],"scientists.":[133],"video":[135],"(http://youtu.be/g61C-nia9ms)":[136],"demonstrates":[137],"creating":[141],"an":[142],"atlas.":[144]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
