{"id":"https://openalex.org/W4388740148","doi":"https://doi.org/10.1109/lra.2023.3333690","title":"A Robotic Surgery Platform for Automated Tissue Micromanipulation in Zebrafish Embryos","display_name":"A Robotic Surgery Platform for Automated Tissue Micromanipulation in Zebrafish Embryos","publication_year":2023,"publication_date":"2023-11-16","ids":{"openalex":"https://openalex.org/W4388740148","doi":"https://doi.org/10.1109/lra.2023.3333690"},"language":"en","primary_location":{"id":"doi:10.1109/lra.2023.3333690","is_oa":true,"landing_page_url":"https://doi.org/10.1109/lra.2023.3333690","pdf_url":"https://ieeexplore.ieee.org/ielx7/7083369/7339444/10319722.pdf","source":{"id":"https://openalex.org/S4210169774","display_name":"IEEE Robotics and Automation Letters","issn_l":"2377-3766","issn":["2377-3766"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Robotics and Automation Letters","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://ieeexplore.ieee.org/ielx7/7083369/7339444/10319722.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5070405357","display_name":"Ece \u00d6zel\u00e7i","orcid":"https://orcid.org/0000-0001-7722-0130"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Ece \u00d6zel\u00e7i","raw_affiliation_strings":["Institute of Mechanical Engineering, Ecole Polytechnique F&#x00E9;d&#x00E9;rale de Lausanne (EPFL), Lausanne, Switzerland"],"raw_orcid":"https://orcid.org/0000-0001-7722-0130","affiliations":[{"raw_affiliation_string":"Institute of Mechanical Engineering, Ecole Polytechnique F&#x00E9;d&#x00E9;rale de Lausanne (EPFL), Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044256600","display_name":"Erfan Etesami","orcid":"https://orcid.org/0009-0003-2921-482X"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Erfan Etesami","raw_affiliation_strings":["Institute of Mechanical Engineering, Ecole Polytechnique F&#x00E9;d&#x00E9;rale de Lausanne (EPFL), Lausanne, Switzerland"],"raw_orcid":"https://orcid.org/0009-0003-2921-482X","affiliations":[{"raw_affiliation_string":"Institute of Mechanical Engineering, Ecole Polytechnique F&#x00E9;d&#x00E9;rale de Lausanne (EPFL), Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076250328","display_name":"Laurel A. Rohde","orcid":"https://orcid.org/0000-0002-4329-9116"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Laurel A. Rohde","raw_affiliation_strings":["Institute of Bioengineering, EPFL, Lausanne, Switzerland","Institute of Bioengineering, EPFL, CH-1015 Lausanne, Switzerland"],"raw_orcid":"https://orcid.org/0000-0002-4329-9116","affiliations":[{"raw_affiliation_string":"Institute of Bioengineering, EPFL, Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]},{"raw_affiliation_string":"Institute of Bioengineering, EPFL, CH-1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080618763","display_name":"Andrew C. Oates","orcid":"https://orcid.org/0000-0002-3015-3978"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Andrew C. Oates","raw_affiliation_strings":["Institute of Bioengineering, EPFL, Lausanne, Switzerland","Institute of Bioengineering, EPFL, CH-1015 Lausanne, Switzerland"],"raw_orcid":"https://orcid.org/0000-0002-3015-3978","affiliations":[{"raw_affiliation_string":"Institute of Bioengineering, EPFL, Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]},{"raw_affiliation_string":"Institute of Bioengineering, EPFL, CH-1015 Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5008447841","display_name":"Mahmut Selman Sakar","orcid":"https://orcid.org/0000-0002-7226-3382"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Mahmut Selman Sakar","raw_affiliation_strings":["Institute of Mechanical Engineering, Ecole Polytechnique F&#x00E9;d&#x00E9;rale de Lausanne (EPFL), Lausanne, Switzerland"],"raw_orcid":"https://orcid.org/0000-0002-7226-3382","affiliations":[{"raw_affiliation_string":"Institute of Mechanical Engineering, Ecole Polytechnique F&#x00E9;d&#x00E9;rale de Lausanne (EPFL), Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I5124864"],"apc_list":null,"apc_paid":null,"fwci":0.5382,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.69001322,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":97},"biblio":{"volume":"9","issue":"1","first_page":"327","last_page":"334"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11677","display_name":"Congenital heart defects research","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11677","display_name":"Congenital heart defects research","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11685","display_name":"Zebrafish Biomedical Research Applications","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10868","display_name":"Soft Robotics and Applications","score":0.9667999744415283,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/microsurgery","display_name":"Microsurgery","score":0.7761884927749634},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6296558380126953},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.49371251463890076},{"id":"https://openalex.org/keywords/teleoperation","display_name":"Teleoperation","score":0.4706033170223236},{"id":"https://openalex.org/keywords/robotics","display_name":"Robotics","score":0.4265063405036926},{"id":"https://openalex.org/keywords/robot","display_name":"Robot","score":0.4190402626991272},{"id":"https://openalex.org/keywords/zebrafish","display_name":"Zebrafish","score":0.41351115703582764},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.3638031482696533},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.3222464323043823},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.20703914761543274},{"id":"https://openalex.org/keywords/surgery","display_name":"Surgery","score":0.10730895400047302},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.08444046974182129}],"concepts":[{"id":"https://openalex.org/C2781437307","wikidata":"https://www.wikidata.org/wiki/Q977628","display_name":"Microsurgery","level":2,"score":0.7761884927749634},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6296558380126953},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.49371251463890076},{"id":"https://openalex.org/C161759796","wikidata":"https://www.wikidata.org/wiki/Q3982902","display_name":"Teleoperation","level":3,"score":0.4706033170223236},{"id":"https://openalex.org/C34413123","wikidata":"https://www.wikidata.org/wiki/Q170978","display_name":"Robotics","level":3,"score":0.4265063405036926},{"id":"https://openalex.org/C90509273","wikidata":"https://www.wikidata.org/wiki/Q11012","display_name":"Robot","level":2,"score":0.4190402626991272},{"id":"https://openalex.org/C2776878037","wikidata":"https://www.wikidata.org/wiki/Q169444","display_name":"Zebrafish","level":3,"score":0.41351115703582764},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.3638031482696533},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.3222464323043823},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.20703914761543274},{"id":"https://openalex.org/C141071460","wikidata":"https://www.wikidata.org/wiki/Q40821","display_name":"Surgery","level":1,"score":0.10730895400047302},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.08444046974182129},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/lra.2023.3333690","is_oa":true,"landing_page_url":"https://doi.org/10.1109/lra.2023.3333690","pdf_url":"https://ieeexplore.ieee.org/ielx7/7083369/7339444/10319722.pdf","source":{"id":"https://openalex.org/S4210169774","display_name":"IEEE Robotics and Automation Letters","issn_l":"2377-3766","issn":["2377-3766"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Robotics and Automation Letters","raw_type":"journal-article"},{"id":"pmh:oai:infoscience.epfl.ch:306492","is_oa":true,"landing_page_url":"https://infoscience.epfl.ch/handle/20.500.14299/202194","pdf_url":"https://infoscience.epfl.ch/bitstreams/c63928fd-a8ed-4c9e-b83c-d2664f64dc4a/download","source":{"id":"https://openalex.org/S4306400487","display_name":"Infoscience (Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"research article"}],"best_oa_location":{"id":"doi:10.1109/lra.2023.3333690","is_oa":true,"landing_page_url":"https://doi.org/10.1109/lra.2023.3333690","pdf_url":"https://ieeexplore.ieee.org/ielx7/7083369/7339444/10319722.pdf","source":{"id":"https://openalex.org/S4210169774","display_name":"IEEE Robotics and Automation Letters","issn_l":"2377-3766","issn":["2377-3766"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Robotics and Automation Letters","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Responsible consumption and production","id":"https://metadata.un.org/sdg/12","score":0.5199999809265137}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320915","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4388740148.pdf","grobid_xml":"https://content.openalex.org/works/W4388740148.grobid-xml"},"referenced_works_count":31,"referenced_works":["https://openalex.org/W1549559463","https://openalex.org/W1901129140","https://openalex.org/W2009908021","https://openalex.org/W2033059921","https://openalex.org/W2046770273","https://openalex.org/W2092009101","https://openalex.org/W2094627020","https://openalex.org/W2102084748","https://openalex.org/W2107180104","https://openalex.org/W2291100649","https://openalex.org/W2421945334","https://openalex.org/W2811417286","https://openalex.org/W2891109293","https://openalex.org/W2904061522","https://openalex.org/W2905338897","https://openalex.org/W2911358444","https://openalex.org/W2946771864","https://openalex.org/W2979352248","https://openalex.org/W2995271379","https://openalex.org/W2999726172","https://openalex.org/W3086517093","https://openalex.org/W3101157441","https://openalex.org/W3135237636","https://openalex.org/W3165739687","https://openalex.org/W3202158607","https://openalex.org/W3207015906","https://openalex.org/W4246681734","https://openalex.org/W4285165310","https://openalex.org/W4285740584","https://openalex.org/W4313340138","https://openalex.org/W4375858815"],"related_works":["https://openalex.org/W4256528904","https://openalex.org/W1597543017","https://openalex.org/W1923069992","https://openalex.org/W4245153001","https://openalex.org/W4243165149","https://openalex.org/W2160982102","https://openalex.org/W2048862765","https://openalex.org/W3147492987","https://openalex.org/W2770942502","https://openalex.org/W2938575486"],"abstract_inverted_index":{"Microsurgical":[0],"manipulations":[1],"are":[2,15],"key":[3],"experimental":[4,78,131],"techniques":[5,14,67,129],"in":[6,11,123,130],"life":[7],"science":[8],"research,":[9],"particularly":[10],"embryology.":[12],"These":[13],"most":[16],"often":[17],"performed":[18],"manually":[19],"by":[20,102],"highly":[21],"skilled":[22],"scientists,":[23],"posing":[24],"limitations":[25],"on":[26,72],"speed,":[27],"precision,":[28],"and":[29,63,94,98],"reproducibility.":[30],"Here":[31],"we":[32,84,106],"introduce":[33],"a":[34,51],"fully":[35],"automated":[36,88],"robotic":[37,70,121],"microsurgery":[38,100,122],"platform":[39,89,112],"that":[40,86],"generates":[41],"explants":[42],"of":[43,82,110,127],"specific":[44],"tail":[45],"tissue":[46],"from":[47],"growing":[48],"zebrafish":[49],"embryos,":[50],"popular":[52],"model":[53],"organism":[54],"for":[55,113,120],"vertebrate":[56],"development.":[57],"Our":[58],"work":[59],"leverages":[60],"both":[61],"classical":[62],"deep":[64],"learning-based":[65],"image-processing":[66],"to":[68],"perform":[69],"micromanipulation":[71],"biological":[73],"specimens.":[74],"Using":[75],"two":[76],"example":[77],"cases":[79],"as":[80],"proof":[81],"concept,":[83],"show":[85],"our":[87,111],"is":[90],"more":[91],"precise,":[92],"accurate,":[93],"efficient":[95],"than":[96],"teleoperated":[97],"manual":[99],"conducted":[101],"experienced":[103],"scientists.":[104],"Moreover,":[105],"demonstrate":[107],"the":[108,125],"usefulness":[109],"inexperienced":[114],"experimentalists,":[115],"supporting":[116],"an":[117],"important":[118],"role":[119],"broadening":[124],"use":[126],"such":[128],"research.":[132]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
