{"id":"https://openalex.org/W4413557428","doi":"https://doi.org/10.1109/jbhi.2025.3602670","title":"A Dynamic Multi-Scale Hypergraph Learning Framework Driven by Features and Structures for ceRNA-Disease Association Prediction","display_name":"A Dynamic Multi-Scale Hypergraph Learning Framework Driven by Features and Structures for ceRNA-Disease Association Prediction","publication_year":2025,"publication_date":"2025-08-25","ids":{"openalex":"https://openalex.org/W4413557428","doi":"https://doi.org/10.1109/jbhi.2025.3602670","pmid":"https://pubmed.ncbi.nlm.nih.gov/40853813"},"language":"en","primary_location":{"id":"doi:10.1109/jbhi.2025.3602670","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2025.3602670","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5069085710","display_name":"Xinfei Wang","orcid":null},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210134929","display_name":"Jilin Province Science and Technology Department","ror":"https://ror.org/049x38272","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210134929"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xin-Fei Wang","raw_affiliation_strings":["College of Computer Science and Technology, Jilin University, Changchun, China"],"raw_orcid":"https://orcid.org/0000-0003-0554-2936","affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, China","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210134929"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101463922","display_name":"Lan Huang","orcid":"https://orcid.org/0000-0003-3233-3777"},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210134929","display_name":"Jilin Province Science and Technology Department","ror":"https://ror.org/049x38272","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210134929"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lan Huang","raw_affiliation_strings":["College of Computer Science and Technology, Jilin University, Changchun, China"],"raw_orcid":"https://orcid.org/0000-0003-3233-3777","affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, China","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210134929"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100322699","display_name":"Yan Wang","orcid":"https://orcid.org/0000-0002-4751-0708"},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210134929","display_name":"Jilin Province Science and Technology Department","ror":"https://ror.org/049x38272","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210134929"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yan Wang","raw_affiliation_strings":["College of Computer Science and Technology, Jilin University, Changchun, China"],"raw_orcid":"https://orcid.org/0000-0002-4751-0708","affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, China","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210134929"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007914848","display_name":"Renchu Guan","orcid":"https://orcid.org/0000-0002-7162-7826"},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210134929","display_name":"Jilin Province Science and Technology Department","ror":"https://ror.org/049x38272","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210134929"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ren-Chu Guan","raw_affiliation_strings":["College of Computer Science and Technology, Jilin University, Changchun, China"],"raw_orcid":"https://orcid.org/0000-0002-7162-7826","affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, China","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210134929"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019805735","display_name":"Zhu\u2010Hong You","orcid":"https://orcid.org/0000-0003-1266-2696"},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhu-Hong You","raw_affiliation_strings":["School of Computer Science, Northwestern Polytechnical University, Xi&#x2019;an, China","School of Computer Science, Northwestern Polytechnical University, Xi&#x0027;an, China"],"raw_orcid":"https://orcid.org/0000-0003-1266-2696","affiliations":[{"raw_affiliation_string":"School of Computer Science, Northwestern Polytechnical University, Xi&#x2019;an, China","institution_ids":["https://openalex.org/I17145004"]},{"raw_affiliation_string":"School of Computer Science, Northwestern Polytechnical University, Xi&#x0027;an, China","institution_ids":["https://openalex.org/I17145004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058786170","display_name":"Fengfeng Zhou","orcid":"https://orcid.org/0000-0002-8108-6007"},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210134929","display_name":"Jilin Province Science and Technology Department","ror":"https://ror.org/049x38272","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210134929"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Feng-Feng Zhou","raw_affiliation_strings":["College of Computer Science and Technology, Jilin University, Changchun, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, China","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210134929"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100379935","display_name":"Yuqing Li","orcid":"https://orcid.org/0000-0002-5110-4323"},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Yu-Qing Li","raw_affiliation_strings":["Faculty of Arts and Science, University of Toronto, Toronto, ON, Canada","Faculty of Arts and Science, University of Toronto, Toronto, Ontario, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Arts and Science, University of Toronto, Toronto, ON, Canada","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"Faculty of Arts and Science, University of Toronto, Toronto, Ontario, Canada","institution_ids":["https://openalex.org/I185261750"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5109092858","display_name":"Yuan Fu","orcid":null},"institutions":[{"id":"https://openalex.org/I16038530","display_name":"Aberystwyth University","ror":"https://ror.org/015m2p889","country_code":"GB","type":"education","lineage":["https://openalex.org/I16038530"]},{"id":"https://openalex.org/I4210146599","display_name":"Institute of Biological, Environmental and Rural Sciences","ror":"https://ror.org/051wgfj58","country_code":"GB","type":"education","lineage":["https://openalex.org/I16038530","https://openalex.org/I2799693246","https://openalex.org/I4210087105","https://openalex.org/I4210146599"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Yuan Fu","raw_affiliation_strings":["Institute of Biological, Environmental and Rural Sciences, Aberystwyth University, Aberystwyth, U.K","Institute of Biological, Environmental and Rural Sciences, Aberystwyth University, Aberystwyth, Ceredigion, U.K"],"raw_orcid":"https://orcid.org/0009-0001-7772-3181","affiliations":[{"raw_affiliation_string":"Institute of Biological, Environmental and Rural Sciences, Aberystwyth University, Aberystwyth, U.K","institution_ids":["https://openalex.org/I16038530","https://openalex.org/I4210146599"]},{"raw_affiliation_string":"Institute of Biological, Environmental and Rural Sciences, Aberystwyth University, Aberystwyth, Ceredigion, U.K","institution_ids":["https://openalex.org/I16038530","https://openalex.org/I4210146599"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":4.2402,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.95209653,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"30","issue":"3","first_page":"2252","last_page":"2262"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9919000267982483,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9919000267982483,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9782999753952026,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9391000270843506,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6877733469009399},{"id":"https://openalex.org/keywords/hypergraph","display_name":"Hypergraph","score":0.6327793598175049},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.5401076674461365},{"id":"https://openalex.org/keywords/association","display_name":"Association (psychology)","score":0.5208662152290344},{"id":"https://openalex.org/keywords/association-rule-learning","display_name":"Association rule learning","score":0.49160465598106384},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4816495478153229},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.4653260409832001},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.43798619508743286},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4044826328754425},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.16181695461273193},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.12438103556632996},{"id":"https://openalex.org/keywords/cartography","display_name":"Cartography","score":0.07244861125946045},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.07215774059295654}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6877733469009399},{"id":"https://openalex.org/C2781221856","wikidata":"https://www.wikidata.org/wiki/Q840247","display_name":"Hypergraph","level":2,"score":0.6327793598175049},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.5401076674461365},{"id":"https://openalex.org/C142853389","wikidata":"https://www.wikidata.org/wiki/Q744778","display_name":"Association (psychology)","level":2,"score":0.5208662152290344},{"id":"https://openalex.org/C193524817","wikidata":"https://www.wikidata.org/wiki/Q386780","display_name":"Association rule learning","level":2,"score":0.49160465598106384},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4816495478153229},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.4653260409832001},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.43798619508743286},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4044826328754425},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.16181695461273193},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.12438103556632996},{"id":"https://openalex.org/C58640448","wikidata":"https://www.wikidata.org/wiki/Q42515","display_name":"Cartography","level":1,"score":0.07244861125946045},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.07215774059295654},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C118615104","wikidata":"https://www.wikidata.org/wiki/Q121416","display_name":"Discrete mathematics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000095482","descriptor_name":"RNA, Competitive Endogenous","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095482","descriptor_name":"RNA, Competitive Endogenous","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1109/jbhi.2025.3602670","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2025.3602670","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},{"id":"pmid:40853813","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40853813","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE journal of biomedical and health informatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3380686447","display_name":null,"funder_award_id":"20240101364JC","funder_id":"https://openalex.org/F4320335953","funder_display_name":"Jilin Scientific and Technological Development Program"},{"id":"https://openalex.org/G4473396350","display_name":null,"funder_award_id":"2025M771545","funder_id":"https://openalex.org/F4320321543","funder_display_name":"China Postdoctoral Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320321543","display_name":"China Postdoctoral Science Foundation","ror":"https://ror.org/0426zh255"},{"id":"https://openalex.org/F4320335953","display_name":"Jilin Scientific and Technological Development Program","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":39,"referenced_works":["https://openalex.org/W2014578307","https://openalex.org/W2046387002","https://openalex.org/W2130687298","https://openalex.org/W2158485828","https://openalex.org/W2765950793","https://openalex.org/W2891866117","https://openalex.org/W2990045899","https://openalex.org/W3011122062","https://openalex.org/W3098523662","https://openalex.org/W3116906693","https://openalex.org/W3139601120","https://openalex.org/W3197001103","https://openalex.org/W3198168376","https://openalex.org/W3199430355","https://openalex.org/W3205633532","https://openalex.org/W4200310000","https://openalex.org/W4282926996","https://openalex.org/W4291825018","https://openalex.org/W4294376371","https://openalex.org/W4295241431","https://openalex.org/W4297183296","https://openalex.org/W4313406530","https://openalex.org/W4361017398","https://openalex.org/W4385288569","https://openalex.org/W4385564848","https://openalex.org/W4387516871","https://openalex.org/W4391296859","https://openalex.org/W4393158757","https://openalex.org/W4395030761","https://openalex.org/W4400390698","https://openalex.org/W4403809881","https://openalex.org/W4403889214","https://openalex.org/W4404219622","https://openalex.org/W4404260628","https://openalex.org/W4404656064","https://openalex.org/W4407316259","https://openalex.org/W4409947437","https://openalex.org/W4411246317","https://openalex.org/W4411987748"],"related_works":["https://openalex.org/W4376608589","https://openalex.org/W1537073411","https://openalex.org/W1948107826","https://openalex.org/W3138003926","https://openalex.org/W1630514295","https://openalex.org/W4300037846","https://openalex.org/W4288275998","https://openalex.org/W2963081352","https://openalex.org/W4376608938","https://openalex.org/W2392697706"],"abstract_inverted_index":{"Competitive":[0],"endogenous":[1],"RNA":[2],"(ceRNA)":[3],"networks":[4,22],"are":[5],"pivotal":[6],"for":[7,18,85,103,196,228],"uncovering":[8],"disease":[9],"molecular":[10,47,75],"mechanisms.":[11],"Graph":[12],"representation":[13],"learning":[14,88],"is":[15],"a":[16,97,140,167,182,224],"cornerstone":[17],"modeling":[19],"biological":[20],"regulatory":[21,69,113,126,132,155],"and":[23,120,130,187],"predicting":[24,104],"disease-related":[25,220],"biomarkers.":[26,107],"However,":[27],"current":[28],"methods":[29],"face":[30],"challenges:":[31],"traditional":[32],"graph":[33,40,87],"neural":[34,170],"network":[35,171],"(GNN)":[36],"rely":[37],"on":[38,201],"low-order":[39],"structures,":[41,165],"which":[42],"struggle":[43],"to":[44,57,122,147,163,172,191],"capture":[45],"high-order":[46,154],"interactions,":[48,76],"resulting":[49],"in":[50,218],"topological":[51,176],"information":[52],"loss;":[53],"shallow":[54,179],"GNN":[55],"fail":[56],"model":[58],"long-range":[59],"dependencies,":[60],"while":[61],"deep":[62],"architectures":[63],"suffer":[64],"from":[65],"over-smoothing,":[66],"limiting":[67],"complex":[68],"expression;":[70],"static":[71],"embeddings":[72,195],"overlook":[73],"dynamic":[74],"reducing":[77],"biomarker":[78],"accuracy.":[79],"These":[80],"limitations":[81],"highlight":[82],"the":[83,174,215],"need":[84],"advanced":[86],"frameworks.":[89],"To":[90],"address":[91],"these":[92],"challenges,":[93],"we":[94,138,158],"propose":[95],"DMHLF,":[96],"Dynamic":[98,142],"Multi-scale":[99],"Hypergraph":[100],"Learning":[101],"Framework":[102],"disease-associated":[105],"ceRNA":[106,125,221],"The":[108],"framework":[109],"first":[110],"integrates":[111],"multiple":[112],"relationships":[114],"among":[115],"miRNAs,":[116],"lncRNAs,":[117],"circRNAs,":[118],"mRNAs,":[119],"diseases":[121],"construct":[123],"disease-specific":[124],"networks,":[127],"capturing":[128],"local":[129],"global":[131,175],"patterns":[133],"through":[134],"multi-Hop":[135],"hyperedges.":[136],"Subsequently,":[137],"devise":[139],"Hypergraph-Weighted":[141],"Random":[143],"Walk":[144],"(HEDRW)":[145],"method":[146],"dynamically":[148],"extract":[149],"node":[150,194],"meta-embeddings":[151],"that":[152,205],"encode":[153],"information.":[156],"Concurrently,":[157],"extend":[159],"Eigen-GNN":[160],"spectral":[161],"analysis":[162],"hypergraph":[164,169],"incorporating":[166],"residual-enhanced":[168],"preserve":[173],"properties":[177],"of":[178],"hypergraphs.":[180],"Finally,":[181],"cross-scale":[183],"attention":[184],"mechanism":[185],"aligns":[186],"fuses":[188],"multi-scale":[189],"features":[190],"generate":[192],"high-quality":[193],"disease-ceRNA":[197],"association":[198],"prediction.":[199],"Experiments":[200],"diverse":[202],"datasets":[203],"demonstrate":[204],"DMHLF":[206],"significantly":[207],"outperforms":[208],"existing":[209],"methods.":[210],"Case":[211],"study":[212],"further":[213],"validates":[214],"framework's":[216],"efficacy":[217],"identifying":[219],"biomarkers,":[222],"providing":[223],"reliable":[225],"predictive":[226],"tool":[227],"biomedical":[229],"research.":[230]},"counts_by_year":[{"year":2026,"cited_by_count":9}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
