{"id":"https://openalex.org/W4413785633","doi":"https://doi.org/10.1109/jbhi.2025.3592687","title":"Unleashing the Power of Pretrained Transformer for Dense Prediction in Physiological Signals","display_name":"Unleashing the Power of Pretrained Transformer for Dense Prediction in Physiological Signals","publication_year":2025,"publication_date":"2025-08-28","ids":{"openalex":"https://openalex.org/W4413785633","doi":"https://doi.org/10.1109/jbhi.2025.3592687","pmid":"https://pubmed.ncbi.nlm.nih.gov/40875430"},"language":"en","primary_location":{"id":"doi:10.1109/jbhi.2025.3592687","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2025.3592687","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008213343","display_name":"Qihan Hu","orcid":"https://orcid.org/0000-0002-8869-5235"},"institutions":[{"id":"https://openalex.org/I24943067","display_name":"Fudan University","ror":"https://ror.org/013q1eq08","country_code":"CN","type":"education","lineage":["https://openalex.org/I24943067"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qihan Hu","raw_affiliation_strings":["College of Biomedical Engineering, Department of Biomedical Engineering, Fudan University, Shanghai, China","College of Biomedical Engineering, Fudan University, Shanghai, China"],"raw_orcid":"https://orcid.org/0000-0002-8869-5235","affiliations":[{"raw_affiliation_string":"College of Biomedical Engineering, Department of Biomedical Engineering, Fudan University, Shanghai, China","institution_ids":["https://openalex.org/I24943067"]},{"raw_affiliation_string":"College of Biomedical Engineering, Fudan University, Shanghai, China","institution_ids":["https://openalex.org/I24943067"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022952764","display_name":"Daomiao Wang","orcid":"https://orcid.org/0000-0002-3478-6692"},"institutions":[{"id":"https://openalex.org/I24943067","display_name":"Fudan University","ror":"https://ror.org/013q1eq08","country_code":"CN","type":"education","lineage":["https://openalex.org/I24943067"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Daomiao Wang","raw_affiliation_strings":["College of Biomedical Engineering, Department of Biomedical Engineering, Fudan University, Shanghai, China","College of Biomedical Engineering, Fudan University, Shanghai, China"],"raw_orcid":"https://orcid.org/0000-0002-3478-6692","affiliations":[{"raw_affiliation_string":"College of Biomedical Engineering, Department of Biomedical Engineering, Fudan University, Shanghai, China","institution_ids":["https://openalex.org/I24943067"]},{"raw_affiliation_string":"College of Biomedical Engineering, Fudan University, Shanghai, China","institution_ids":["https://openalex.org/I24943067"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100371011","display_name":"Hong Wu","orcid":"https://orcid.org/0009-0005-0617-5295"},"institutions":[{"id":"https://openalex.org/I24943067","display_name":"Fudan University","ror":"https://ror.org/013q1eq08","country_code":"CN","type":"education","lineage":["https://openalex.org/I24943067"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hong Wu","raw_affiliation_strings":["College of Biomedical Engineering, Department of Biomedical Engineering, Fudan University, Shanghai, China","College of Biomedical Engineering, Fudan University, Shanghai, China"],"raw_orcid":"https://orcid.org/0009-0005-0617-5295","affiliations":[{"raw_affiliation_string":"College of Biomedical Engineering, Department of Biomedical Engineering, Fudan University, Shanghai, China","institution_ids":["https://openalex.org/I24943067"]},{"raw_affiliation_string":"College of Biomedical Engineering, Fudan University, Shanghai, China","institution_ids":["https://openalex.org/I24943067"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Jian Liu","orcid":"https://orcid.org/0000-0001-5791-7221"},"institutions":[{"id":"https://openalex.org/I24943067","display_name":"Fudan University","ror":"https://ror.org/013q1eq08","country_code":"CN","type":"education","lineage":["https://openalex.org/I24943067"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jian Liu","raw_affiliation_strings":["College of Biomedical Engineering, Department of Biomedical Engineering, Fudan University, Shanghai, China","College of Biomedical Engineering, Fudan University, Shanghai, China"],"raw_orcid":"https://orcid.org/0000-0001-5791-7221","affiliations":[{"raw_affiliation_string":"College of Biomedical Engineering, Department of Biomedical Engineering, Fudan University, Shanghai, China","institution_ids":["https://openalex.org/I24943067"]},{"raw_affiliation_string":"College of Biomedical Engineering, Fudan University, Shanghai, China","institution_ids":["https://openalex.org/I24943067"]}]},{"author_position":"last","author":{"id":null,"display_name":"Cuiwei Yang","orcid":"https://orcid.org/0000-0003-3338-5835"},"institutions":[{"id":"https://openalex.org/I24943067","display_name":"Fudan University","ror":"https://ror.org/013q1eq08","country_code":"CN","type":"education","lineage":["https://openalex.org/I24943067"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Cuiwei Yang","raw_affiliation_strings":["College of Biomedical Engineering, Department of Biomedical Engineering, Fudan University, Shanghai, China","College of Biomedical Engineering, Fudan University, Shanghai, China"],"raw_orcid":"https://orcid.org/0000-0003-3338-5835","affiliations":[{"raw_affiliation_string":"College of Biomedical Engineering, Department of Biomedical Engineering, Fudan University, Shanghai, China","institution_ids":["https://openalex.org/I24943067"]},{"raw_affiliation_string":"College of Biomedical Engineering, Fudan University, Shanghai, China","institution_ids":["https://openalex.org/I24943067"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I24943067"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.32244204,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"30","issue":"1","first_page":"196","last_page":"207"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11021","display_name":"ECG Monitoring and Analysis","score":0.9376999735832214,"subfield":{"id":"https://openalex.org/subfields/2705","display_name":"Cardiology and Cardiovascular Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11021","display_name":"ECG Monitoring and Analysis","score":0.9376999735832214,"subfield":{"id":"https://openalex.org/subfields/2705","display_name":"Cardiology and Cardiovascular Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10429","display_name":"EEG and Brain-Computer Interfaces","score":0.9046000242233276,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6102393865585327},{"id":"https://openalex.org/keywords/transformer","display_name":"Transformer","score":0.5046912431716919},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.40069761872291565},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3353750705718994},{"id":"https://openalex.org/keywords/electrical-engineering","display_name":"Electrical engineering","score":0.24488991498947144},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.17761185765266418},{"id":"https://openalex.org/keywords/voltage","display_name":"Voltage","score":0.17149963974952698}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6102393865585327},{"id":"https://openalex.org/C66322947","wikidata":"https://www.wikidata.org/wiki/Q11658","display_name":"Transformer","level":3,"score":0.5046912431716919},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.40069761872291565},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3353750705718994},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.24488991498947144},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.17761185765266418},{"id":"https://openalex.org/C165801399","wikidata":"https://www.wikidata.org/wiki/Q25428","display_name":"Voltage","level":2,"score":0.17149963974952698}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000328","descriptor_name":"Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000328","descriptor_name":"Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000328","descriptor_name":"Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001794","descriptor_name":"Blood Pressure","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D001794","descriptor_name":"Blood Pressure","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D001794","descriptor_name":"Blood Pressure","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D004562","descriptor_name":"Electrocardiography","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004562","descriptor_name":"Electrocardiography","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004562","descriptor_name":"Electrocardiography","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012815","descriptor_name":"Signal Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012815","descriptor_name":"Signal Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012815","descriptor_name":"Signal Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1109/jbhi.2025.3592687","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2025.3592687","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},{"id":"pmid:40875430","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40875430","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE journal of biomedical and health informatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G6679990840","display_name":null,"funder_award_id":"62371138","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":49,"referenced_works":["https://openalex.org/W1901129140","https://openalex.org/W2739879705","https://openalex.org/W2904680839","https://openalex.org/W2982157312","https://openalex.org/W2982162446","https://openalex.org/W2993420974","https://openalex.org/W3033575361","https://openalex.org/W3082102870","https://openalex.org/W3085046840","https://openalex.org/W3145881934","https://openalex.org/W4206909988","https://openalex.org/W4210830697","https://openalex.org/W4214520160","https://openalex.org/W4221045651","https://openalex.org/W4224607725","https://openalex.org/W4225672218","https://openalex.org/W4229018581","https://openalex.org/W4282562155","https://openalex.org/W4282965153","https://openalex.org/W4285113479","https://openalex.org/W4293534759","https://openalex.org/W4312273141","https://openalex.org/W4312318972","https://openalex.org/W4312570182","https://openalex.org/W4319300510","https://openalex.org/W4319915056","https://openalex.org/W4360764657","https://openalex.org/W4367309315","https://openalex.org/W4378078091","https://openalex.org/W4383104986","https://openalex.org/W4383200203","https://openalex.org/W4386075861","https://openalex.org/W4386076504","https://openalex.org/W4386866128","https://openalex.org/W4387421727","https://openalex.org/W4388579579","https://openalex.org/W4389833735","https://openalex.org/W4389897695","https://openalex.org/W4390026450","https://openalex.org/W4390628615","https://openalex.org/W4391875569","https://openalex.org/W4393346068","https://openalex.org/W4395481619","https://openalex.org/W4400036991","https://openalex.org/W4401330121","https://openalex.org/W4402648640","https://openalex.org/W4402823058","https://openalex.org/W4403420268","https://openalex.org/W4403510757"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2033914206","https://openalex.org/W2042327336"],"abstract_inverted_index":{"The":[0,52,171],"physiological":[1,32,132,189],"signals":[2],"obtained":[3],"from":[4],"advanced":[5],"sensors,":[6],"combined":[7,56],"with":[8,41,57],"deep":[9,76],"learning":[10,77],"techniques":[11],"for":[12,31,97,103,128],"classification":[13],"and":[14,83,122,141,167,192,207],"regression":[15],"tasks,":[16],"have":[17,73],"become":[18,62],"a":[19,63,110,118,123,198],"core":[20],"driving":[21],"force":[22],"in":[23,187,202],"enhancing":[24,188],"smart":[25],"healthcare.":[26],"Recently,":[27],"dense":[28,98,129,155,210],"prediction":[29,68,130,156,211],"tasks":[30],"signals-aimed":[33],"at":[34],"generating":[35],"predictions":[36],"that":[37,116,174],"are":[38],"closely":[39],"aligned":[40],"the":[42,92,101,136,182,205],"input":[43],"signal":[44,190],"to":[45,66,79,90],"enable":[46],"fine-grained":[47],"analysis-have":[48],"garnered":[49],"increasing":[50],"attention.":[51],"UNet":[53],"family,":[54],"often":[55],"sophisticated":[58],"task-specific":[59,105],"customizations,":[60],"has":[61],"popular":[64],"choice":[65],"improve":[67],"performance.":[69],"However,":[70],"pretrained":[71,95,119,185],"Transformers":[72,96,186],"recently":[74],"revolutionized":[75],"due":[78],"their":[80],"powerful":[81],"transferability":[82],"effectiveness.":[84],"In":[85],"this":[86],"work,":[87],"we":[88,144],"aim":[89],"harness":[91],"power":[93],"of":[94,184,209],"prediction,":[99],"eliminating":[100],"need":[102],"extensive":[104],"architecture":[106,115,177],"design.":[107],"We":[108],"propose":[109],"simple":[111],"yet":[112],"universal":[113],"encoder-decoder":[114],"utilizes":[117],"Transformer":[120],"encoder":[121],"lightweight":[124],"convolutional":[125],"Restormer":[126],"decoder":[127],"on":[131,152],"signals.":[133],"To":[134],"optimize":[135],"trade-off":[137],"between":[138],"model":[139],"performance":[140,206],"computational":[142],"efficiency,":[143],"incorporate":[145],"knowledge":[146],"distillation":[147],"(KD).":[148],"Our":[149],"experiments":[150],"focus":[151],"four":[153],"representative":[154],"tasks:":[157],"blood":[158],"pressure":[159],"waveform":[160],"(BPW)":[161],"estimation,":[162],"PPG-to-ECG":[163],"(P2E)":[164],"reconstruction,":[165],"denoising,":[166],"fiducial":[168],"point":[169],"localization.":[170],"results":[172],"show":[173],"our":[175],"proposed":[176],"outperforms":[178],"state-of-the-art":[179],"models,":[180],"validating":[181],"potential":[183],"processing":[191],"medical":[193],"diagnostics.":[194],"This":[195],"approach":[196],"marks":[197],"significant":[199],"step":[200],"forward":[201],"optimizing":[203],"both":[204],"efficiency":[208],"tasks.":[212]},"counts_by_year":[],"updated_date":"2026-01-10T23:39:48.068659","created_date":"2025-10-10T00:00:00"}
