{"id":"https://openalex.org/W4412623535","doi":"https://doi.org/10.1109/jbhi.2025.3592643","title":"MRLF-DDI: A Multi-View Representation Learning Framework for Drug-Drug Interaction Event Prediction","display_name":"MRLF-DDI: A Multi-View Representation Learning Framework for Drug-Drug Interaction Event Prediction","publication_year":2025,"publication_date":"2025-07-24","ids":{"openalex":"https://openalex.org/W4412623535","doi":"https://doi.org/10.1109/jbhi.2025.3592643","pmid":"https://pubmed.ncbi.nlm.nih.gov/40705571"},"language":"en","primary_location":{"id":"doi:10.1109/jbhi.2025.3592643","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2025.3592643","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053729346","display_name":"Jian Zhong","orcid":"https://orcid.org/0009-0007-0010-3949"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jian Zhong","raw_affiliation_strings":["Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha, China"],"raw_orcid":"https://orcid.org/0009-0007-0010-3949","affiliations":[{"raw_affiliation_string":"Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061114972","display_name":"Haochen Zhao","orcid":"https://orcid.org/0000-0001-8794-3148"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Haochen Zhao","raw_affiliation_strings":["Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha, China"],"raw_orcid":"https://orcid.org/0000-0001-8794-3148","affiliations":[{"raw_affiliation_string":"Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Xiao Liang","orcid":"https://orcid.org/0009-0006-1140-4280"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiao Liang","raw_affiliation_strings":["Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha, China"],"raw_orcid":"https://orcid.org/0009-0006-1140-4280","affiliations":[{"raw_affiliation_string":"Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001452497","display_name":"Qichang Zhao","orcid":"https://orcid.org/0000-0002-8319-9793"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qichang Zhao","raw_affiliation_strings":["Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha, China"],"raw_orcid":"https://orcid.org/0000-0002-8319-9793","affiliations":[{"raw_affiliation_string":"Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100438360","display_name":"Jianxin Wang","orcid":"https://orcid.org/0000-0003-1516-0480"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianxin Wang","raw_affiliation_strings":["Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha, China"],"raw_orcid":"https://orcid.org/0000-0003-1516-0480","affiliations":[{"raw_affiliation_string":"Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha, China","institution_ids":["https://openalex.org/I139660479"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I139660479"],"apc_list":null,"apc_paid":null,"fwci":0.8854,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.78365011,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":"30","issue":"3","first_page":"2217","last_page":"2227"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9265999794006348,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7118473649024963},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.6876156330108643},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.6136831641197205},{"id":"https://openalex.org/keywords/drug-drug-interaction","display_name":"Drug-drug interaction","score":0.5772584676742554},{"id":"https://openalex.org/keywords/event","display_name":"Event (particle physics)","score":0.5066774487495422},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5050671696662903},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.39878159761428833},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.1975608468055725},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.16116341948509216}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7118473649024963},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.6876156330108643},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.6136831641197205},{"id":"https://openalex.org/C2910466267","wikidata":"https://www.wikidata.org/wiki/Q718753","display_name":"Drug-drug interaction","level":3,"score":0.5772584676742554},{"id":"https://openalex.org/C2779662365","wikidata":"https://www.wikidata.org/wiki/Q5416694","display_name":"Event (particle physics)","level":2,"score":0.5066774487495422},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5050671696662903},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.39878159761428833},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.1975608468055725},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.16116341948509216},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004347","descriptor_name":"Drug Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004347","descriptor_name":"Drug Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1109/jbhi.2025.3592643","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2025.3592643","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},{"id":"pmid:40705571","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40705571","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE journal of biomedical and health informatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1289362119","display_name":null,"funder_award_id":"62472202","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4785461891","display_name":null,"funder_award_id":"U22A2041","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":41,"referenced_works":["https://openalex.org/W1983913269","https://openalex.org/W1987971958","https://openalex.org/W2059901490","https://openalex.org/W2074460311","https://openalex.org/W2091439417","https://openalex.org/W2150881576","https://openalex.org/W2802200505","https://openalex.org/W3024894285","https://openalex.org/W3089843526","https://openalex.org/W3094497296","https://openalex.org/W3139253280","https://openalex.org/W3157889929","https://openalex.org/W3212512279","https://openalex.org/W4224322651","https://openalex.org/W4285165731","https://openalex.org/W4285794944","https://openalex.org/W4307432689","https://openalex.org/W4313405519","https://openalex.org/W4313485929","https://openalex.org/W4382239162","https://openalex.org/W4382240023","https://openalex.org/W4385622198","https://openalex.org/W4386136390","https://openalex.org/W4390005328","https://openalex.org/W4391168615","https://openalex.org/W4393158757","https://openalex.org/W4393260925","https://openalex.org/W4398781103","https://openalex.org/W4399034525","https://openalex.org/W4399995443","https://openalex.org/W4400972506","https://openalex.org/W4401918320","https://openalex.org/W4402741177","https://openalex.org/W4403277309","https://openalex.org/W4403578206","https://openalex.org/W4403598866","https://openalex.org/W4404636578","https://openalex.org/W4405184672","https://openalex.org/W4405907205","https://openalex.org/W4406817136","https://openalex.org/W4410761926"],"related_works":["https://openalex.org/W3082755771","https://openalex.org/W2395332729","https://openalex.org/W2407625558","https://openalex.org/W2485789143","https://openalex.org/W2040338448","https://openalex.org/W2415873281","https://openalex.org/W2463344692","https://openalex.org/W4403660838","https://openalex.org/W4248267070","https://openalex.org/W2341529717"],"abstract_inverted_index":{"Accurately":[0],"predicting":[1],"drug-drug":[2],"interaction":[3,58,62],"events":[4],"(DDIEs)":[5],"is":[6],"critical":[7],"for":[8],"improving":[9],"medication":[10],"safety":[11],"and":[12,30,60,93,103,120,125],"guiding":[13],"clinical":[14],"decision-making.":[15],"However,":[16],"existing":[17],"graph":[18],"neural":[19],"network":[20],"(GNN)-based":[21],"methods":[22],"often":[23],"struggle":[24],"to":[25,32,99],"effectively":[26],"integrate":[27],"multi-view":[28,45],"features":[29,71],"generalize":[31],"novel":[33],"or":[34],"understudied":[35],"drugs.":[36],"To":[37],"address":[38],"these":[39],"limitations,":[40],"we":[41],"propose":[42],"MRLF-DDI,":[43],"a":[44,90,94],"representation":[46],"learning":[47,102],"framework":[48],"that":[49,112],"jointly":[50],"models":[51],"information":[52],"from":[53],"individual":[54],"drug":[55],"features,":[56],"local":[57],"contexts,":[59],"global":[61],"patterns.":[63],"MRLF-DDI":[64,113],"introduces":[65],"the":[66,77],"use":[67],"of":[68,80],"atom-level":[69],"structural":[70],"enriched":[72],"with":[73],"bond":[74],"angle":[75],"information-marking":[76],"first":[78],"incorporation":[79],"this":[81],"geometry-aware":[82],"feature":[83,101],"in":[84,117,133],"DDIE":[85],"prediction.":[86],"It":[87],"further":[88,128],"employs":[89],"multi-granularity":[91],"GNN":[92],"gated":[95],"knowledge":[96],"transfer":[97],"strategy":[98],"enhance":[100],"cold-start":[104,121],"generalization.":[105],"Extensive":[106],"experiments":[107],"on":[108],"benchmark":[109],"datasets":[110],"demonstrate":[111],"achieves":[114],"superior":[115],"performance":[116],"both":[118],"warm-start":[119],"scenarios.":[122],"Case":[123],"studies":[124],"visualization":[126],"analyses":[127],"highlight":[129],"its":[130],"practical":[131],"utility":[132],"identifying":[134],"clinically":[135],"relevant":[136],"DDIEs.":[137]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-03-09T07:00:12.390032","created_date":"2025-10-10T00:00:00"}
