{"id":"https://openalex.org/W4412939723","doi":"https://doi.org/10.1109/jbhi.2025.3589381","title":"Cross-Interaction of Chinese Characters Structures and Boundary Features for Improving Clinical Named Entity Recognition","display_name":"Cross-Interaction of Chinese Characters Structures and Boundary Features for Improving Clinical Named Entity Recognition","publication_year":2025,"publication_date":"2025-08-04","ids":{"openalex":"https://openalex.org/W4412939723","doi":"https://doi.org/10.1109/jbhi.2025.3589381","pmid":"https://pubmed.ncbi.nlm.nih.gov/40758492"},"language":"en","primary_location":{"id":"doi:10.1109/jbhi.2025.3589381","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2025.3589381","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Ye Wang","orcid":"https://orcid.org/0000-0002-1748-6890"},"institutions":[{"id":"https://openalex.org/I10535382","display_name":"Chongqing University of Posts and Telecommunications","ror":"https://ror.org/03dgaqz26","country_code":"CN","type":"education","lineage":["https://openalex.org/I10535382"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ye Wang","raw_affiliation_strings":["Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongqing, China","Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongwen Road 2, Nanan District, Chongqing, China"],"raw_orcid":"https://orcid.org/0000-0002-1748-6890","affiliations":[{"raw_affiliation_string":"Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongqing, China","institution_ids":["https://openalex.org/I10535382"]},{"raw_affiliation_string":"Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongwen Road 2, Nanan District, Chongqing, China","institution_ids":["https://openalex.org/I10535382"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067569555","display_name":"Wei Qi","orcid":"https://orcid.org/0000-0003-1553-7508"},"institutions":[{"id":"https://openalex.org/I10535382","display_name":"Chongqing University of Posts and Telecommunications","ror":"https://ror.org/03dgaqz26","country_code":"CN","type":"education","lineage":["https://openalex.org/I10535382"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qi Wei","raw_affiliation_strings":["Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongqing, China","Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongwen Road 2, Nanan District, Chongqing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongqing, China","institution_ids":["https://openalex.org/I10535382"]},{"raw_affiliation_string":"Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongwen Road 2, Nanan District, Chongqing, China","institution_ids":["https://openalex.org/I10535382"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Hong Yu","orcid":"https://orcid.org/0000-0003-0667-8413"},"institutions":[{"id":"https://openalex.org/I10535382","display_name":"Chongqing University of Posts and Telecommunications","ror":"https://ror.org/03dgaqz26","country_code":"CN","type":"education","lineage":["https://openalex.org/I10535382"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hong Yu","raw_affiliation_strings":["Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongqing, China","Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongwen Road 2, Nanan District, Chongqing, China"],"raw_orcid":"https://orcid.org/0000-0003-0667-8413","affiliations":[{"raw_affiliation_string":"Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongqing, China","institution_ids":["https://openalex.org/I10535382"]},{"raw_affiliation_string":"Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongwen Road 2, Nanan District, Chongqing, China","institution_ids":["https://openalex.org/I10535382"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031220156","display_name":"Guoyin Wang","orcid":"https://orcid.org/0000-0002-8521-5232"},"institutions":[{"id":"https://openalex.org/I10535382","display_name":"Chongqing University of Posts and Telecommunications","ror":"https://ror.org/03dgaqz26","country_code":"CN","type":"education","lineage":["https://openalex.org/I10535382"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Guoyin Wang","raw_affiliation_strings":["Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongqing, China","Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongwen Road 2, Nanan District, Chongqing, China"],"raw_orcid":"https://orcid.org/0000-0002-8521-5232","affiliations":[{"raw_affiliation_string":"Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongqing, China","institution_ids":["https://openalex.org/I10535382"]},{"raw_affiliation_string":"Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongwen Road 2, Nanan District, Chongqing, China","institution_ids":["https://openalex.org/I10535382"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100362212","display_name":"Chunmeng Shi","orcid":"https://orcid.org/0000-0002-8264-738X"},"institutions":[{"id":"https://openalex.org/I10535382","display_name":"Chongqing University of Posts and Telecommunications","ror":"https://ror.org/03dgaqz26","country_code":"CN","type":"education","lineage":["https://openalex.org/I10535382"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chunmeng Shi","raw_affiliation_strings":["Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongqing, China","Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongwen Road 2, Nanan District, Chongqing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongqing, China","institution_ids":["https://openalex.org/I10535382"]},{"raw_affiliation_string":"Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongwen Road 2, Nanan District, Chongqing, China","institution_ids":["https://openalex.org/I10535382"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5017048122","display_name":"Dajiang Lei","orcid":"https://orcid.org/0000-0002-7482-6417"},"institutions":[{"id":"https://openalex.org/I10535382","display_name":"Chongqing University of Posts and Telecommunications","ror":"https://ror.org/03dgaqz26","country_code":"CN","type":"education","lineage":["https://openalex.org/I10535382"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Dajiang Lei","raw_affiliation_strings":["Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongqing, China","Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongwen Road 2, Nanan District, Chongqing, China"],"raw_orcid":"https://orcid.org/0000-0002-7482-6417","affiliations":[{"raw_affiliation_string":"Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongqing, China","institution_ids":["https://openalex.org/I10535382"]},{"raw_affiliation_string":"Chongqing Key Laboratory of Computational Intelligence, Chongqing University of Posts and Telecommunications, Chongwen Road 2, Nanan District, Chongqing, China","institution_ids":["https://openalex.org/I10535382"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I10535382"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.09447515,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"29","issue":"11","first_page":"8508","last_page":"8521"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9872999787330627,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9872999787330627,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9010999798774719,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7012383937835693},{"id":"https://openalex.org/keywords/boundary","display_name":"Boundary (topology)","score":0.5290022492408752},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.47470489144325256},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.463126003742218},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.37220340967178345},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3574818968772888},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.10538271069526672}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7012383937835693},{"id":"https://openalex.org/C62354387","wikidata":"https://www.wikidata.org/wiki/Q875399","display_name":"Boundary (topology)","level":2,"score":0.5290022492408752},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.47470489144325256},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.463126003742218},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.37220340967178345},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3574818968772888},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.10538271069526672},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002681","descriptor_name":"China","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002681","descriptor_name":"China","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002681","descriptor_name":"China","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1109/jbhi.2025.3589381","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2025.3589381","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},{"id":"pmid:40758492","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40758492","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE journal of biomedical and health informatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1009164294","display_name":null,"funder_award_id":"cstc2019jcyj-cxttX0002","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G25452052","display_name":null,"funder_award_id":"62306056","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3453920714","display_name":null,"funder_award_id":"62221005","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6572751108","display_name":null,"funder_award_id":"cstc2022ycjh-bgzxm0004","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7324361910","display_name":null,"funder_award_id":"62136002","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":41,"referenced_works":["https://openalex.org/W2559281960","https://openalex.org/W2949176808","https://openalex.org/W2953356739","https://openalex.org/W2957763665","https://openalex.org/W2962904552","https://openalex.org/W2963558486","https://openalex.org/W2963571188","https://openalex.org/W2970323499","https://openalex.org/W2971019153","https://openalex.org/W2973965787","https://openalex.org/W3007060302","https://openalex.org/W3023618320","https://openalex.org/W3027012100","https://openalex.org/W3034379414","https://openalex.org/W3138408498","https://openalex.org/W3146463158","https://openalex.org/W3174142642","https://openalex.org/W3176023514","https://openalex.org/W3184554934","https://openalex.org/W4205347349","https://openalex.org/W4205484788","https://openalex.org/W4206594926","https://openalex.org/W4214833673","https://openalex.org/W4283689910","https://openalex.org/W4286639925","https://openalex.org/W4292622571","https://openalex.org/W4294170691","https://openalex.org/W4297253404","https://openalex.org/W4297802393","https://openalex.org/W4311772362","https://openalex.org/W4312431055","https://openalex.org/W4312445551","https://openalex.org/W4313413394","https://openalex.org/W4319998010","https://openalex.org/W4320518830","https://openalex.org/W4321497222","https://openalex.org/W4385245566","https://openalex.org/W4388505307","https://openalex.org/W4392044798","https://openalex.org/W4401043314","https://openalex.org/W4403921082"],"related_works":["https://openalex.org/W3188962172","https://openalex.org/W2772917594","https://openalex.org/W4312825515","https://openalex.org/W4306742369","https://openalex.org/W4303457083","https://openalex.org/W2131146434","https://openalex.org/W2951359407","https://openalex.org/W2033914206","https://openalex.org/W2042327336","https://openalex.org/W3204019825"],"abstract_inverted_index":{"In":[0],"the":[1,14,45,144,183],"natural":[2],"language":[3],"processing":[4],"task":[5],"of":[6,18,32,47,100,141,148],"clinical":[7,33,55],"named":[8],"entity":[9,86],"recognition":[10],"(CNER),":[11],"accurately":[12,122],"identifying":[13],"boundaries":[15],"and":[16,35,75,104,116,121,139,151,187],"categories":[17],"medical":[19,177],"entities":[20,56,138],"is":[21],"crucial.":[22],"However,":[23],"traditional":[24],"methods":[25],"struggle":[26],"to":[27,63,85,119,132,159],"recognize":[28,160],"a":[29,72,79,94,129],"large":[30],"number":[31],"terms":[34,150],"symbols":[36],"that":[37,57,166],"have":[38],"never":[39],"been":[40],"encountered":[41],"before,":[42],"ultimately":[43],"limiting":[44],"performance":[46],"CNER.":[48],"Besides,":[49],"there":[50],"exist":[51],"some":[52],"easy-to-confuse":[53],"Chinese":[54,101,112],"are":[58],"semantically":[59],"similar":[60],"but":[61],"belong":[62],"quite":[64],"different":[65,137],"categories,":[66],"such":[67],"as":[68,153,155],"\"\"":[69,76],"(pulmonary":[70,77],"nodules,":[71],"symptom":[73],"entity)":[74],"tuberculosis,":[78],"disease":[80],"entity),":[81],"which":[82],"can":[83],"lead":[84],"misidentification.":[87],"To":[88],"address":[89],"these":[90],"problems,":[91],"we":[92],"propose":[93],"novel":[95],"NER":[96],"model":[97,110,169],"called":[98],"Cross-Interaction":[99],"characters":[102],"structures":[103],"Boundary":[105],"Features":[106],"(CCS).":[107],"The":[108],"proposed":[109,168],"leverages":[111],"character":[113],"structural":[114],"features":[115],"boundary":[117],"information":[118],"comprehensively":[120],"identify":[123],"confusing":[124],"entities.":[125],"We":[126],"further":[127],"design":[128],"Cross-Attention":[130],"mechanism":[131],"capture":[133],"dependency":[134],"relationships":[135],"between":[136],"radicals":[140],"characters,":[142],"enhancing":[143],"model's":[145],"semantic":[146],"understanding":[147],"specialized":[149],"symbols,":[152],"well":[154],"improving":[156],"its":[157],"ability":[158],"boundaries.":[161],"Our":[162],"experimental":[163],"results":[164],"show":[165],"our":[167],"outperforms":[170],"other":[171],"state-of-the-art":[172],"models":[173],"on":[174,182],"various":[175],"public":[176],"datasets,":[178,189],"achieving":[179],"significant":[180],"improvements":[181],"CCKS2020,":[184],"CMeEE,":[185],"CMI,":[186],"IMCS":[188],"respectively.":[190]},"counts_by_year":[],"updated_date":"2025-11-08T23:21:52.890332","created_date":"2025-10-10T00:00:00"}
