{"id":"https://openalex.org/W4410294852","doi":"https://doi.org/10.1109/jbhi.2025.3569428","title":"Benchmarking Radiology Report Generation From Noisy Free-Texts","display_name":"Benchmarking Radiology Report Generation From Noisy Free-Texts","publication_year":2025,"publication_date":"2025-05-12","ids":{"openalex":"https://openalex.org/W4410294852","doi":"https://doi.org/10.1109/jbhi.2025.3569428","pmid":"https://pubmed.ncbi.nlm.nih.gov/40354200"},"language":"en","primary_location":{"id":"doi:10.1109/jbhi.2025.3569428","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2025.3569428","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5025439231","display_name":"Yujian Yuan","orcid":"https://orcid.org/0009-0000-0974-6851"},"institutions":[{"id":"https://openalex.org/I4210090176","display_name":"Institute of Computing Technology","ror":"https://ror.org/0090r4d87","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210090176"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yujian Yuan","raw_affiliation_strings":["Institute of Computing Technology, University of Chinese Academy of Sciences, Beijing, China","Institute of Computing Technology, Chinese Academy of Sciences and University of Chinese Academy of Sciences, Beijing, China"],"raw_orcid":"https://orcid.org/0009-0000-0974-6851","affiliations":[{"raw_affiliation_string":"Institute of Computing Technology, University of Chinese Academy of Sciences, Beijing, China","institution_ids":["https://openalex.org/I4210090176","https://openalex.org/I4210165038"]},{"raw_affiliation_string":"Institute of Computing Technology, Chinese Academy of Sciences and University of Chinese Academy of Sciences, Beijing, China","institution_ids":["https://openalex.org/I4210090176","https://openalex.org/I4210165038"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101048444","display_name":"Yanting Zheng","orcid":null},"institutions":[{"id":"https://openalex.org/I117532281","display_name":"Guangzhou University of Chinese Medicine","ror":"https://ror.org/03qb7bg95","country_code":"CN","type":"education","lineage":["https://openalex.org/I117532281"]},{"id":"https://openalex.org/I4210105832","display_name":"First Affiliated Hospital of Guangzhou University of Chinese Medicine","ror":"https://ror.org/01mxpdw03","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210105832"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yanting Zheng","raw_affiliation_strings":["The First Affiliated Hospital, Guangzhou University of Chinese Medicine, Guangzhou, China","Hospital of Guangzhou University of Chinese Medicine, Guangzhou, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The First Affiliated Hospital, Guangzhou University of Chinese Medicine, Guangzhou, China","institution_ids":["https://openalex.org/I4210105832"]},{"raw_affiliation_string":"Hospital of Guangzhou University of Chinese Medicine, Guangzhou, China","institution_ids":["https://openalex.org/I117532281"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5083630052","display_name":"Liangqiong Qu","orcid":"https://orcid.org/0000-0001-8235-7852"},"institutions":[{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Liangqiong Qu","raw_affiliation_strings":["The University of Hong Kong, Hong Kong, SAR, China","University of Hong Kong, Hong Kong SAR, China"],"raw_orcid":"https://orcid.org/0000-0001-8235-7852","affiliations":[{"raw_affiliation_string":"The University of Hong Kong, Hong Kong, SAR, China","institution_ids":["https://openalex.org/I889458895"]},{"raw_affiliation_string":"University of Hong Kong, Hong Kong SAR, China","institution_ids":["https://openalex.org/I889458895"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.04146462,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"29","issue":"10","first_page":"7549","last_page":"7558"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9815000295639038,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9732000231742859,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/benchmarking","display_name":"Benchmarking","score":0.7825857400894165},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.669781506061554},{"id":"https://openalex.org/keywords/radiology","display_name":"Radiology","score":0.4248691499233246},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3957853615283966},{"id":"https://openalex.org/keywords/medical-physics","display_name":"Medical physics","score":0.39271456003189087},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.35688498616218567},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3410465121269226},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.32991015911102295}],"concepts":[{"id":"https://openalex.org/C86251818","wikidata":"https://www.wikidata.org/wiki/Q816754","display_name":"Benchmarking","level":2,"score":0.7825857400894165},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.669781506061554},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.4248691499233246},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3957853615283966},{"id":"https://openalex.org/C19527891","wikidata":"https://www.wikidata.org/wiki/Q1120908","display_name":"Medical physics","level":1,"score":0.39271456003189087},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.35688498616218567},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3410465121269226},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.32991015911102295},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.0},{"id":"https://openalex.org/C162853370","wikidata":"https://www.wikidata.org/wiki/Q39809","display_name":"Marketing","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011873","descriptor_name":"Radiology Information Systems","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true},{"descriptor_ui":"D011873","descriptor_name":"Radiology Information Systems","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true},{"descriptor_ui":"D011873","descriptor_name":"Radiology Information Systems","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1109/jbhi.2025.3569428","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2025.3569428","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},{"id":"pmid:40354200","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40354200","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE journal of biomedical and health informatics","raw_type":null},{"id":"pmh:oai:hub.hku.hk:10722/357575","is_oa":false,"landing_page_url":"https://hub.hku.hk/handle/10722/357575","pdf_url":null,"source":{"id":"https://openalex.org/S4377196271","display_name":"The HKU Scholars Hub (University of Hong Kong)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I889458895","host_organization_name":"University of Hong Kong","host_organization_lineage":["https://openalex.org/I889458895"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.4099999964237213,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G1537518084","display_name":null,"funder_award_id":"2023A04J1860","funder_id":"https://openalex.org/F4320335480","funder_display_name":"Guangzhou Municipal Science and Technology Project"},{"id":"https://openalex.org/G4100402671","display_name":null,"funder_award_id":"62306253","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335480","display_name":"Guangzhou Municipal Science and Technology Project","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":26,"referenced_works":["https://openalex.org/W2101105183","https://openalex.org/W2946580620","https://openalex.org/W2963466845","https://openalex.org/W2995225687","https://openalex.org/W3022477662","https://openalex.org/W3103694015","https://openalex.org/W4221157571","https://openalex.org/W4360604432","https://openalex.org/W4362522726","https://openalex.org/W4377010595","https://openalex.org/W4385948838","https://openalex.org/W4386076127","https://openalex.org/W4386498861","https://openalex.org/W4388496436","https://openalex.org/W4388594599","https://openalex.org/W4391136507","https://openalex.org/W4391292768","https://openalex.org/W4392240262","https://openalex.org/W4393335435","https://openalex.org/W4401043863","https://openalex.org/W4402670042","https://openalex.org/W4402923149","https://openalex.org/W4404781831","https://openalex.org/W4405669265","https://openalex.org/W4409357579","https://openalex.org/W4411630045"],"related_works":["https://openalex.org/W4238897586","https://openalex.org/W435179959","https://openalex.org/W2619091065","https://openalex.org/W2059640416","https://openalex.org/W1490753184","https://openalex.org/W2284465472","https://openalex.org/W2291782699","https://openalex.org/W1993948687","https://openalex.org/W2000169967","https://openalex.org/W2112883198"],"abstract_inverted_index":{"Automatic":[0],"radiology":[1,55,89,137,191],"report":[2,66,80,90,147,163,192],"generation":[3,91,193],"can":[4],"enhance":[5],"diagnostic":[6],"efficiency":[7],"and":[8,20,79,98,124,139,149,162,185],"accuracy.":[9],"However,":[10],"clean":[11],"open-source":[12],"imaging":[13],"scan-report":[14],"pairs":[15],"are":[16],"limited":[17],"in":[18,93,106,195],"scale":[19],"variety.":[21],"Moreover,":[22],"the":[23,85,133,168],"vast":[24],"amount":[25],"of":[26,87,104,136,170,188],"radiological":[27,96],"texts":[28],"available":[29],"online":[30],"is":[31],"often":[32],"too":[33],"noisy":[34,58,183],"to":[35],"be":[36],"directly":[37],"employed.":[38],"To":[39,60,83],"address":[40,84],"this":[41],"challenge,":[42],"we":[43,63,109],"introduce":[44,110],"a":[45,65,111,150,178],"novel":[46],"task":[47],"called":[48],"Noisy":[49],"Report":[50],"Refinement":[51],"(NRR),":[52],"which":[53],"generates":[54],"reports":[56,105,189],"from":[57],"free-texts.":[59],"achieve":[61],"this,":[62],"propose":[64],"refinement":[67],"pipeline":[68],"that":[69,159],"leverages":[70],"large":[71],"language":[72],"models":[73],"(LLMs)":[74],"enhanced":[75],"with":[76,182],"guided":[77,160],"self-critique":[78,161],"selection":[81,164],"strategies.":[82],"inability":[86],"existing":[88],"metrics":[92,131,176,194],"measuring":[94],"cleanliness,":[95,148],"usefulness,":[97],"factual":[99],"correctness":[100],"across":[101],"various":[102],"modalities":[103],"NRR":[107,116,155],"task,":[108],"new":[112],"benchmark,":[113],"NRRBench,":[114],"for":[115],"evaluation.":[117],"This":[118],"benchmark":[119],"includes":[120],"two":[121,130],"online-sourced":[122],"datasets":[123],"four":[125],"clinically":[126],"explainable":[127],"LLM-based":[128],"metrics:":[129],"evaluate":[132],"matching":[134],"rate":[135,184],"entities":[138],"modality-specific":[140],"template":[141],"attributes":[142],"respectively,":[143],"one":[144],"metric":[145,152],"assesses":[146],"combined":[151],"evaluates":[153],"overall":[154],"performance.":[156],"Experiments":[157],"demonstrate":[158],"strategies":[165],"significantly":[166],"improve":[167],"quality":[169],"refined":[171],"reports.":[172],"Additionally,":[173],"our":[174],"proposed":[175],"show":[177],"much":[179],"higher":[180],"correlation":[181],"error":[186],"count":[187],"than":[190],"evaluating":[196],"NRR.":[197]},"counts_by_year":[],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
