{"id":"https://openalex.org/W4406458571","doi":"https://doi.org/10.1109/jbhi.2025.3525647","title":"TGAP-Net: Twin Graph Attention Pseudo-Label Generation for Weakly Supervised Semantic Segmentation","display_name":"TGAP-Net: Twin Graph Attention Pseudo-Label Generation for Weakly Supervised Semantic Segmentation","publication_year":2025,"publication_date":"2025-01-16","ids":{"openalex":"https://openalex.org/W4406458571","doi":"https://doi.org/10.1109/jbhi.2025.3525647","pmid":"https://pubmed.ncbi.nlm.nih.gov/40030898"},"language":"en","primary_location":{"id":"doi:10.1109/jbhi.2025.3525647","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2025.3525647","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5012208676","display_name":"Haohua Chen","orcid":"https://orcid.org/0000-0003-4605-6379"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210146711","display_name":"Sun Yat-sen University Cancer Center","ror":"https://ror.org/0400g8r85","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210146711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Haohua Chen","raw_affiliation_strings":["Guangdong Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy, Collaborative Innovation Center for Cancer Medicine, State Key Laboratory of Oncology, Sun Yat-sen University Cancer Center, Guangzhou, China"],"raw_orcid":"https://orcid.org/0000-0003-4605-6379","affiliations":[{"raw_affiliation_string":"Guangdong Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy, Collaborative Innovation Center for Cancer Medicine, State Key Laboratory of Oncology, Sun Yat-sen University Cancer Center, Guangzhou, China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210146711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088498169","display_name":"Yishu Deng","orcid":"https://orcid.org/0000-0002-7904-2208"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210146711","display_name":"Sun Yat-sen University Cancer Center","ror":"https://ror.org/0400g8r85","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210146711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yishu Deng","raw_affiliation_strings":["Guangdong Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy, Collaborative Innovation Center for Cancer Medicine, State Key Laboratory of Oncology, Sun Yat-sen University Cancer Center, Guangzhou, China"],"raw_orcid":"https://orcid.org/0000-0002-7904-2208","affiliations":[{"raw_affiliation_string":"Guangdong Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy, Collaborative Innovation Center for Cancer Medicine, State Key Laboratory of Oncology, Sun Yat-sen University Cancer Center, Guangzhou, China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210146711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101153373","display_name":"Zhensheng Hu","orcid":null},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhensheng Hu","raw_affiliation_strings":["Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, China"],"raw_orcid":"https://orcid.org/0009-0009-7255-1518","affiliations":[{"raw_affiliation_string":"Zhongshan School of Medicine, Sun Yat-Sen University, Guangzhou, China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100365163","display_name":"Bin Li","orcid":"https://orcid.org/0000-0002-2613-5451"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210146711","display_name":"Sun Yat-sen University Cancer Center","ror":"https://ror.org/0400g8r85","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210146711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bin Li","raw_affiliation_strings":["Guangdong Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy, Collaborative Innovation Center for Cancer Medicine, State Key Laboratory of Oncology, Sun Yat-sen University Cancer Center, Guangzhou, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy, Collaborative Innovation Center for Cancer Medicine, State Key Laboratory of Oncology, Sun Yat-sen University Cancer Center, Guangzhou, China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210146711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031021374","display_name":"Bingzhong Jing","orcid":null},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210146711","display_name":"Sun Yat-sen University Cancer Center","ror":"https://ror.org/0400g8r85","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210146711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bingzhong Jing","raw_affiliation_strings":["Guangdong Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy, Collaborative Innovation Center for Cancer Medicine, State Key Laboratory of Oncology, Sun Yat-sen University Cancer Center, Guangzhou, China"],"raw_orcid":"https://orcid.org/0000-0001-6941-1308","affiliations":[{"raw_affiliation_string":"Guangdong Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy, Collaborative Innovation Center for Cancer Medicine, State Key Laboratory of Oncology, Sun Yat-sen University Cancer Center, Guangzhou, China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210146711"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077466846","display_name":"C. J. LI","orcid":"https://orcid.org/0000-0003-4556-2018"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210146711","display_name":"Sun Yat-sen University Cancer Center","ror":"https://ror.org/0400g8r85","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210146711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chaofeng Li","raw_affiliation_strings":["Guangdong Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy, Collaborative Innovation Center for Cancer Medicine, State Key Laboratory of Oncology, Sun Yat-sen University Cancer Center, Guangzhou, China"],"raw_orcid":"https://orcid.org/0000-0003-4556-2018","affiliations":[{"raw_affiliation_string":"Guangdong Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy, Collaborative Innovation Center for Cancer Medicine, State Key Laboratory of Oncology, Sun Yat-sen University Cancer Center, Guangzhou, China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210146711"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.0032192,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"29","issue":"6","first_page":"4335","last_page":"4348"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11550","display_name":"Text and Document Classification Technologies","score":0.9541000127792358,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11550","display_name":"Text and Document Classification Technologies","score":0.9541000127792358,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12016","display_name":"Web Data Mining and Analysis","score":0.9516000151634216,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10036","display_name":"Advanced Neural Network Applications","score":0.9513999819755554,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7582470774650574},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5830248594284058},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.5712306499481201},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.513211727142334},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4414510130882263},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.4089146554470062},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.24900633096694946}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7582470774650574},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5830248594284058},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.5712306499481201},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.513211727142334},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4414510130882263},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.4089146554470062},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.24900633096694946}],"mesh":[{"descriptor_ui":"D000069553","descriptor_name":"Supervised Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069553","descriptor_name":"Supervised Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069553","descriptor_name":"Supervised Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007090","descriptor_name":"Image Interpretation, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D007090","descriptor_name":"Image Interpretation, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D007090","descriptor_name":"Image Interpretation, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1109/jbhi.2025.3525647","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2025.3525647","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},{"id":"pmid:40030898","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40030898","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE journal of biomedical and health informatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2298542501","display_name":null,"funder_award_id":"82172862","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":40,"referenced_works":["https://openalex.org/W1965451568","https://openalex.org/W2103243046","https://openalex.org/W2117692326","https://openalex.org/W2133515615","https://openalex.org/W2306289963","https://openalex.org/W2787091153","https://openalex.org/W2794803511","https://openalex.org/W2817817898","https://openalex.org/W2952367870","https://openalex.org/W2963870605","https://openalex.org/W2972185346","https://openalex.org/W2979651795","https://openalex.org/W2982805640","https://openalex.org/W2986297814","https://openalex.org/W2992308087","https://openalex.org/W3026792888","https://openalex.org/W3034373787","https://openalex.org/W3034930876","https://openalex.org/W3035703639","https://openalex.org/W3037529526","https://openalex.org/W3123982987","https://openalex.org/W3125080173","https://openalex.org/W3160261825","https://openalex.org/W3164581645","https://openalex.org/W3176774696","https://openalex.org/W3191219235","https://openalex.org/W3207797062","https://openalex.org/W4220950530","https://openalex.org/W4221006922","https://openalex.org/W4226101486","https://openalex.org/W4282959113","https://openalex.org/W4312836939","https://openalex.org/W4313139852","https://openalex.org/W4313153210","https://openalex.org/W4382240846","https://openalex.org/W6638444622","https://openalex.org/W6682082992","https://openalex.org/W6739696289","https://openalex.org/W6810417291","https://openalex.org/W6810435918"],"related_works":["https://openalex.org/W4379231730","https://openalex.org/W4389858081","https://openalex.org/W2501551404","https://openalex.org/W4298131179","https://openalex.org/W2113201962","https://openalex.org/W4385583601","https://openalex.org/W4395685956","https://openalex.org/W2033914206","https://openalex.org/W2042327336","https://openalex.org/W3204019825"],"abstract_inverted_index":{"Multilabel":[0],"pathological":[1,19],"tissue":[2],"segmentation":[3],"is":[4,152,232],"a":[5,70,91,153,194,222,227],"vital":[6],"task":[7],"in":[8,30,54,138,156,177,186,197,235],"computational":[9,247],"pathology":[10],"that":[11,99,119],"aims":[12],"to":[13,75,145,225],"semantically":[14],"segment":[15],"different":[16],"tissues":[17],"within":[18,81],"images.":[20],"Fully":[21],"and":[22,48,83,87,109,128,135,168,173,213,242],"weakly":[23,34,106],"supervised":[24,35],"models":[25,36],"have":[26],"demonstrated":[27],"impressive":[28],"performances":[29],"this":[31],"regard.":[32],"However,":[33],"still":[37],"face":[38],"challenges,":[39],"such":[40],"as":[41],"the":[42,67,88,102,111,123,131,139,157,171,178,205,214,237,244],"poor":[43,208],"performance":[44,209,216,229],"of":[45,51,69,90,149,190,207,217,239,246],"nondominant":[46,132,211],"samples":[47,212],"limited":[49],"effectiveness":[50],"aggregation":[52,97,218],"functions":[53],"conveying":[55],"supervisory":[56],"signals.":[57],"To":[58],"address":[59],"these":[60],"issues,":[61],"we":[62],"propose":[63,221],"two":[64],"key":[65],"contributions:":[66],"introduction":[68],"graph":[71],"attention":[72],"network(GAT)":[73],"module":[74],"establish":[76],"contextual":[77],"relationships":[78],"between":[79],"pixels":[80],"patches":[82],"generate":[84],"high-quality":[85],"pseudo-labels,":[86],"development":[89,245],"novel":[92,223],"global":[93],"classified":[94],"max":[95],"pooling(GCMP)":[96],"function":[98],"effectively":[100],"transmits":[101],"supervision":[103],"signal":[104],"from":[105],"annotated":[107],"labels":[108],"improves":[110],"model's":[112],"classification":[113],"accuracy.":[114],"The":[115],"experimental":[116],"results":[117],"show":[118],"our":[120,161,202],"method":[121],"improved":[122,163],"MIoU":[124,148,164,189],"scores":[125,165],"by":[126,166],"3.3":[127],"3":[129],"for":[130],"samples,":[133,175],"necrosis(NEC)":[134],"lymphocytes(LYM),":[136],"respectively,":[137,176],"LUAD-HistoSeg":[140],"test":[141,183],"set.":[142],"This":[143,192,231],"led":[144],"an":[146,187],"overall":[147,188],"0.774,":[150],"which":[151],"1.8":[154],"increase":[155,196],"state-of-the-art(SOTA)":[158],"performance.":[159,199],"Similarly,":[160],"approach":[162,224],"5.7":[167],"2":[169],"on":[170,210],"NEC":[172],"LYM":[174],"Breast":[179],"Cancer":[180],"Semantic":[181],"Segmentation(BCSS)":[182],"set,":[184],"resulting":[185],"0.721.":[191],"represents":[193],"1.6":[195],"SOTA":[198],"In":[200],"summary,":[201],"work":[203],"addresses":[204],"issues":[206],"suboptimal":[215],"functions.":[219],"We":[220],"achieve":[226],"significant":[228,234],"improvement.":[230],"extremely":[233],"reducing":[236],"workload":[238],"manual":[240],"annotation":[241],"promoting":[243],"pathologies.":[248]},"counts_by_year":[],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
