{"id":"https://openalex.org/W4403598866","doi":"https://doi.org/10.1109/jbhi.2024.3483812","title":"MRGCDDI: Multi-Relation Graph Contrastive Learning Without Data Augmentation for Drug-Drug Interaction Events Prediction","display_name":"MRGCDDI: Multi-Relation Graph Contrastive Learning Without Data Augmentation for Drug-Drug Interaction Events Prediction","publication_year":2024,"publication_date":"2024-10-21","ids":{"openalex":"https://openalex.org/W4403598866","doi":"https://doi.org/10.1109/jbhi.2024.3483812","pmid":"https://pubmed.ncbi.nlm.nih.gov/39437275"},"language":"en","primary_location":{"id":"doi:10.1109/jbhi.2024.3483812","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2024.3483812","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5102790736","display_name":"Yu Li","orcid":"https://orcid.org/0009-0008-8675-1396"},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yu Li","raw_affiliation_strings":["School of Computer Science, Northwestern Polytechnical University, Xi&#x0027;an, China"],"raw_orcid":"https://orcid.org/0009-0008-8675-1396","affiliations":[{"raw_affiliation_string":"School of Computer Science, Northwestern Polytechnical University, Xi&#x0027;an, China","institution_ids":["https://openalex.org/I17145004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056699322","display_name":"Lin-Xuan Hou","orcid":"https://orcid.org/0009-0004-2541-3909"},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lin-Xuan Hou","raw_affiliation_strings":["School of Computer Science, Northwestern Polytechnical University, Xi&#x0027;an, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science, Northwestern Polytechnical University, Xi&#x0027;an, China","institution_ids":["https://openalex.org/I17145004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019805735","display_name":"Zhu\u2010Hong You","orcid":"https://orcid.org/0000-0003-1266-2696"},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhu-Hong You","raw_affiliation_strings":["School of Computer Science, Northwestern Polytechnical University, Xi&#x0027;an, China"],"raw_orcid":"https://orcid.org/0000-0003-1266-2696","affiliations":[{"raw_affiliation_string":"School of Computer Science, Northwestern Polytechnical University, Xi&#x0027;an, China","institution_ids":["https://openalex.org/I17145004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100713634","display_name":"Yuan Yang","orcid":"https://orcid.org/0000-0002-4417-5553"},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]},{"id":"https://openalex.org/I4210153482","display_name":"Changzhou University","ror":"https://ror.org/04ymgwq66","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210153482"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yang Yuan","raw_affiliation_strings":["School of Computer Science and Artificial Intelligence, Changzhou University, Changzhou, China","School of Computer Science, Northwestern Polytechnical University, Xi&#x0027;an, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Artificial Intelligence, Changzhou University, Changzhou, China","institution_ids":["https://openalex.org/I4210153482"]},{"raw_affiliation_string":"School of Computer Science, Northwestern Polytechnical University, Xi&#x0027;an, China","institution_ids":["https://openalex.org/I17145004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037446151","display_name":"Chenggang Mi","orcid":"https://orcid.org/0000-0002-6903-8774"},"institutions":[{"id":"https://openalex.org/I180632629","display_name":"Xi'an International Studies University","ror":"https://ror.org/05gcme754","country_code":"CN","type":"education","lineage":["https://openalex.org/I180632629"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Cheng-Gang Mi","raw_affiliation_strings":["Foreign Language and Literature Institute, Xi&#x0027;an International Studies University, Xi&#x0027;an, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Foreign Language and Literature Institute, Xi&#x0027;an International Studies University, Xi&#x0027;an, China","institution_ids":["https://openalex.org/I180632629"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017713277","display_name":"Yu\u2010An Huang","orcid":"https://orcid.org/0000-0002-5346-2394"},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yu-an Huang","raw_affiliation_strings":["School of Computer Science, Northwestern Polytechnical University, Xi&#x0027;an, China"],"raw_orcid":"https://orcid.org/0000-0002-5346-2394","affiliations":[{"raw_affiliation_string":"School of Computer Science, Northwestern Polytechnical University, Xi&#x0027;an, China","institution_ids":["https://openalex.org/I17145004"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5102010573","display_name":"Hai-Cheng Yi","orcid":"https://orcid.org/0000-0001-8339-396X"},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hai-Cheng Yi","raw_affiliation_strings":["School of Computer Science, Northwestern Polytechnical University, Xi&#x0027;an, China"],"raw_orcid":"https://orcid.org/0000-0001-8339-396X","affiliations":[{"raw_affiliation_string":"School of Computer Science, Northwestern Polytechnical University, Xi&#x0027;an, China","institution_ids":["https://openalex.org/I17145004"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":2.0175,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.88233923,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":97,"max":99},"biblio":{"volume":"30","issue":"2","first_page":"1735","last_page":"1745"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11273","display_name":"Advanced Graph Neural Networks","score":0.9592000246047974,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7120360732078552},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.572187066078186},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5224389433860779},{"id":"https://openalex.org/keywords/relation","display_name":"Relation (database)","score":0.4879254996776581},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4768011271953583},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.37359124422073364},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.33370381593704224},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.2712530493736267},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.21703237295150757},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.17575997114181519},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.09396851062774658}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7120360732078552},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.572187066078186},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5224389433860779},{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.4879254996776581},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4768011271953583},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.37359124422073364},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.33370381593704224},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2712530493736267},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.21703237295150757},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.17575997114181519},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.09396851062774658}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004347","descriptor_name":"Drug Interactions","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D004347","descriptor_name":"Drug Interactions","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1109/jbhi.2024.3483812","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2024.3483812","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},{"id":"pmid:39437275","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39437275","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE journal of biomedical and health informatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":51,"referenced_works":["https://openalex.org/W2013181441","https://openalex.org/W2014304044","https://openalex.org/W2061136308","https://openalex.org/W2091439417","https://openalex.org/W2106417713","https://openalex.org/W2154851992","https://openalex.org/W2194775991","https://openalex.org/W2469049024","https://openalex.org/W2570516417","https://openalex.org/W2604314403","https://openalex.org/W2608081584","https://openalex.org/W2786016794","https://openalex.org/W2798133167","https://openalex.org/W2799720196","https://openalex.org/W2802200505","https://openalex.org/W2900758217","https://openalex.org/W2940601839","https://openalex.org/W2972392269","https://openalex.org/W2997021962","https://openalex.org/W3012871709","https://openalex.org/W3013557219","https://openalex.org/W3024894285","https://openalex.org/W3025569729","https://openalex.org/W3035011799","https://openalex.org/W3089843526","https://openalex.org/W3094497296","https://openalex.org/W3095617312","https://openalex.org/W3115722135","https://openalex.org/W3139253280","https://openalex.org/W3157889929","https://openalex.org/W3203908308","https://openalex.org/W4200351086","https://openalex.org/W4205463297","https://openalex.org/W4214932602","https://openalex.org/W4221023051","https://openalex.org/W4224322651","https://openalex.org/W4285165731","https://openalex.org/W4285794944","https://openalex.org/W4286373989","https://openalex.org/W4294908374","https://openalex.org/W4306317062","https://openalex.org/W4307093167","https://openalex.org/W4310332460","https://openalex.org/W4318150241","https://openalex.org/W4321194906","https://openalex.org/W4382240023","https://openalex.org/W4388595306","https://openalex.org/W4388895091","https://openalex.org/W4393158757","https://openalex.org/W4399369411","https://openalex.org/W4401332220"],"related_works":["https://openalex.org/W4234874385","https://openalex.org/W2323648130","https://openalex.org/W2157140558","https://openalex.org/W2378782423","https://openalex.org/W2388988621","https://openalex.org/W2357797405","https://openalex.org/W2366623913","https://openalex.org/W2374905595","https://openalex.org/W2516693588","https://openalex.org/W2116112408"],"abstract_inverted_index":{"Predicting":[0],"drug-drug":[1,142],"interactions":[2],"(DDIs)":[3],"is":[4,50],"a":[5,63,99],"significant":[6],"concern":[7],"in":[8,34,126,169,172,175,179,195,198,201,205],"the":[9,89,92,107,185],"field":[10],"of":[11,91,167,193],"deep":[12],"learning.":[13],"It":[14],"can":[15],"effectively":[16,129],"reduce":[17],"potential":[18],"adverse":[19],"consequences":[20],"and":[21,46,112,138,177,203],"improve":[22],"therapeutic":[23],"safety.":[24],"Graph":[25],"neural":[26],"network":[27],"(GNN)-based":[28],"models":[29,41],"have":[30],"made":[31],"satisfactory":[32],"progress":[33],"DDI":[35,54],"event":[36,55],"prediction.":[37,56],"However,":[38],"most":[39],"existing":[40],"overlook":[42],"crucial":[43],"drug":[44,131,135],"structure":[45],"interaction":[47,143],"information,":[48],"which":[49],"necessary":[51],"for":[52,109],"accurate":[53],"To":[57],"tackle":[58],"this":[59,127],"issue,":[60],"we":[61],"introduce":[62],"new":[64],"method":[65],"called":[66],"MRGCDDI.":[67],"This":[68],"approach":[69,124],"employs":[70],"contrastive":[71,103],"learning,":[72],"but":[73],"unlike":[74],"conventional":[75],"methods,":[76],"it":[77],"does":[78],"not":[79],"require":[80],"data":[81,94],"augmentation,":[82],"thereby":[83],"avoiding":[84],"additional":[85],"noise.":[86],"MRGCDDI":[87,151,162],"maintains":[88],"semantics":[90],"graphical":[93],"during":[95],"encoder":[96],"perturbation":[97],"through":[98],"simple":[100],"yet":[101],"effective":[102],"learning":[104],"approach,":[105],"without":[106],"need":[108],"manual":[110],"trial":[111],"error,":[113],"tedious":[114],"searching,":[115],"or":[116],"expensive":[117],"domain":[118],"knowledge":[119],"to":[120],"select":[121],"enhancements.":[122],"The":[123],"presented":[125],"study":[128],"integrates":[130],"features":[132],"extracted":[133],"from":[134,140],"molecular":[136],"graphs":[137],"information":[139],"multi-relational":[141],"(DDI)":[144],"networks.":[145],"Extensive":[146],"experimental":[147],"results":[148],"demonstrate":[149],"that":[150],"outperforms":[152],"state-of-the-art":[153],"methods":[154],"on":[155,159,182],"both":[156],"datasets.":[157],"Specifically,":[158],"Deng's":[160],"dataset,":[161,184],"achieves":[163],"an":[164,190],"average":[165,191],"increase":[166,192],"4.33%":[168],"accuracy,":[170,196],"11.57%":[171],"Macro-F1,":[173,199],"10.97%":[174],"Macro-Recall,":[176,202],"10.64%":[178],"Macro-Precision.":[180,206],"Similarly,":[181],"Ryu's":[183],"model":[186],"shows":[187],"improvements":[188],"with":[189],"2.42%":[194],"3.86%":[197],"3.49%":[200],"2.75%":[204]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":4}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
