{"id":"https://openalex.org/W4401387057","doi":"https://doi.org/10.1109/jbhi.2024.3439713","title":"GREMI: An Explainable Multi-Omics Integration Framework for Enhanced Disease Prediction and Module Identification","display_name":"GREMI: An Explainable Multi-Omics Integration Framework for Enhanced Disease Prediction and Module Identification","publication_year":2024,"publication_date":"2024-08-07","ids":{"openalex":"https://openalex.org/W4401387057","doi":"https://doi.org/10.1109/jbhi.2024.3439713","pmid":"https://pubmed.ncbi.nlm.nih.gov/39110558"},"language":"en","primary_location":{"id":"doi:10.1109/jbhi.2024.3439713","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2024.3439713","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5070734136","display_name":"Hong Liang","orcid":"https://orcid.org/0000-0002-2590-7210"},"institutions":[{"id":"https://openalex.org/I151727225","display_name":"Harbin Engineering University","ror":"https://ror.org/03x80pn82","country_code":"CN","type":"education","lineage":["https://openalex.org/I151727225"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hong Liang","raw_affiliation_strings":["College of Intelligent Systems Science and Engineering, Harbin Engineering University, Harbin, China"],"raw_orcid":"https://orcid.org/0000-0002-2590-7210","affiliations":[{"raw_affiliation_string":"College of Intelligent Systems Science and Engineering, Harbin Engineering University, Harbin, China","institution_ids":["https://openalex.org/I151727225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114929890","display_name":"Haoran Luo","orcid":"https://orcid.org/0000-0003-0070-4190"},"institutions":[{"id":"https://openalex.org/I151727225","display_name":"Harbin Engineering University","ror":"https://ror.org/03x80pn82","country_code":"CN","type":"education","lineage":["https://openalex.org/I151727225"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Haoran Luo","raw_affiliation_strings":["College of Intelligent Systems Science and Engineering, Harbin Engineering University, Harbin, China"],"raw_orcid":"https://orcid.org/0000-0003-0070-4190","affiliations":[{"raw_affiliation_string":"College of Intelligent Systems Science and Engineering, Harbin Engineering University, Harbin, China","institution_ids":["https://openalex.org/I151727225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110271782","display_name":"Zhiling Sang","orcid":"https://orcid.org/0009-0000-5593-0166"},"institutions":[{"id":"https://openalex.org/I151727225","display_name":"Harbin Engineering University","ror":"https://ror.org/03x80pn82","country_code":"CN","type":"education","lineage":["https://openalex.org/I151727225"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhiling Sang","raw_affiliation_strings":["Qingdao Innovation and Development Center, Harbin Engineering University, Qingdao, China"],"raw_orcid":"https://orcid.org/0009-0000-5593-0166","affiliations":[{"raw_affiliation_string":"Qingdao Innovation and Development Center, Harbin Engineering University, Qingdao, China","institution_ids":["https://openalex.org/I151727225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114928849","display_name":"Miao Jia","orcid":"https://orcid.org/0009-0008-5108-9988"},"institutions":[{"id":"https://openalex.org/I151727225","display_name":"Harbin Engineering University","ror":"https://ror.org/03x80pn82","country_code":"CN","type":"education","lineage":["https://openalex.org/I151727225"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Miao Jia","raw_affiliation_strings":["Qingdao Innovation and Development Center, Harbin Engineering University, Qingdao, China"],"raw_orcid":"https://orcid.org/0009-0008-5108-9988","affiliations":[{"raw_affiliation_string":"Qingdao Innovation and Development Center, Harbin Engineering University, Qingdao, China","institution_ids":["https://openalex.org/I151727225"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Xiaohan Jiang","orcid":"https://orcid.org/0009-0001-1150-0698"},"institutions":[{"id":"https://openalex.org/I151727225","display_name":"Harbin Engineering University","ror":"https://ror.org/03x80pn82","country_code":"CN","type":"education","lineage":["https://openalex.org/I151727225"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaohan Jiang","raw_affiliation_strings":["Qingdao Innovation and Development Center, Harbin Engineering University, Qingdao, China"],"raw_orcid":"https://orcid.org/0009-0001-1150-0698","affiliations":[{"raw_affiliation_string":"Qingdao Innovation and Development Center, Harbin Engineering University, Qingdao, China","institution_ids":["https://openalex.org/I151727225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100401056","display_name":"Zheng Wang","orcid":"https://orcid.org/0000-0001-7138-8581"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]},{"id":"https://openalex.org/I4210115644","display_name":"Chinese Institute for Brain Research","ror":"https://ror.org/029819q61","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210115644"]},{"id":"https://openalex.org/I4210160507","display_name":"Center for Life Sciences","ror":"https://ror.org/05kje8j93","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570","https://openalex.org/I4210160507","https://openalex.org/I99065089"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zheng Wang","raw_affiliation_strings":["School of Psychological and Cognitive Sciences, Beijing Key Laboratory of Behavior and Mental Health, IDG/McGovern Institute for Brain Research, Peking-Tsinghua Center for Life Sciences, Peking University, Beijing, China"],"raw_orcid":"https://orcid.org/0000-0001-7138-8581","affiliations":[{"raw_affiliation_string":"School of Psychological and Cognitive Sciences, Beijing Key Laboratory of Behavior and Mental Health, IDG/McGovern Institute for Brain Research, Peking-Tsinghua Center for Life Sciences, Peking University, Beijing, China","institution_ids":["https://openalex.org/I4210115644","https://openalex.org/I20231570","https://openalex.org/I4210160507"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101491467","display_name":"Shan Cong","orcid":"https://orcid.org/0000-0002-5981-7678"},"institutions":[{"id":"https://openalex.org/I151727225","display_name":"Harbin Engineering University","ror":"https://ror.org/03x80pn82","country_code":"CN","type":"education","lineage":["https://openalex.org/I151727225"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shan Cong","raw_affiliation_strings":["Qingdao Innovation and Development Center, Harbin Engineering University, Qingdao, China"],"raw_orcid":"https://orcid.org/0000-0002-5981-7678","affiliations":[{"raw_affiliation_string":"Qingdao Innovation and Development Center, Harbin Engineering University, Qingdao, China","institution_ids":["https://openalex.org/I151727225"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5072900720","display_name":"Xiaohui Yao","orcid":"https://orcid.org/0000-0002-8530-7989"},"institutions":[{"id":"https://openalex.org/I151727225","display_name":"Harbin Engineering University","ror":"https://ror.org/03x80pn82","country_code":"CN","type":"education","lineage":["https://openalex.org/I151727225"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaohui Yao","raw_affiliation_strings":["Qingdao Innovation and Development Center, Harbin Engineering University, Qingdao, China"],"raw_orcid":"https://orcid.org/0000-0002-8530-7989","affiliations":[{"raw_affiliation_string":"Qingdao Innovation and Development Center, Harbin Engineering University, Qingdao, China","institution_ids":["https://openalex.org/I151727225"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":3.0617,"has_fulltext":false,"cited_by_count":15,"citation_normalized_percentile":{"value":0.92073008,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"28","issue":"11","first_page":"6983","last_page":"6996"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9901000261306763,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7663391828536987},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5616198778152466},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5129522681236267},{"id":"https://openalex.org/keywords/biomedicine","display_name":"Biomedicine","score":0.4914807081222534},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.48547986149787903},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.4603573679924011},{"id":"https://openalex.org/keywords/relevance","display_name":"Relevance (law)","score":0.4304051995277405},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.42228758335113525},{"id":"https://openalex.org/keywords/perspective","display_name":"Perspective (graphical)","score":0.410248339176178},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2066301703453064}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7663391828536987},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5616198778152466},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5129522681236267},{"id":"https://openalex.org/C66782513","wikidata":"https://www.wikidata.org/wiki/Q864601","display_name":"Biomedicine","level":2,"score":0.4914807081222534},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.48547986149787903},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.4603573679924011},{"id":"https://openalex.org/C158154518","wikidata":"https://www.wikidata.org/wiki/Q7310970","display_name":"Relevance (law)","level":2,"score":0.4304051995277405},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.42228758335113525},{"id":"https://openalex.org/C12713177","wikidata":"https://www.wikidata.org/wiki/Q1900281","display_name":"Perspective (graphical)","level":2,"score":0.410248339176178},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2066301703453064},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009010","descriptor_name":"Monte Carlo Method","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009010","descriptor_name":"Monte Carlo Method","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009010","descriptor_name":"Monte Carlo Method","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009010","descriptor_name":"Monte Carlo Method","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009010","descriptor_name":"Monte Carlo Method","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1109/jbhi.2024.3439713","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2024.3439713","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},{"id":"pmid:39110558","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39110558","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE journal of biomedical and health informatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1157987874","display_name":null,"funder_award_id":"2022HWYQ-093","funder_id":"https://openalex.org/F4320324174","funder_display_name":"Natural Science Foundation of Shandong Province"},{"id":"https://openalex.org/G3866445282","display_name":null,"funder_award_id":"LH2022F016","funder_id":"https://openalex.org/F4320323085","funder_display_name":"Natural Science Foundation of Heilongjiang Province"},{"id":"https://openalex.org/G5858314106","display_name":null,"funder_award_id":"82151303","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6067849187","display_name":null,"funder_award_id":"3072024GH2604","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G6090053005","display_name":null,"funder_award_id":"62103116","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G987348596","display_name":null,"funder_award_id":"62102115","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320323085","display_name":"Natural Science Foundation of Heilongjiang Province","ror":null},{"id":"https://openalex.org/F4320324174","display_name":"Natural Science Foundation of Shandong Province","ror":null},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":91,"referenced_works":["https://openalex.org/W1557152547","https://openalex.org/W1880466029","https://openalex.org/W1881929920","https://openalex.org/W1930624869","https://openalex.org/W1964974194","https://openalex.org/W1966327575","https://openalex.org/W1967320885","https://openalex.org/W2015374851","https://openalex.org/W2044074081","https://openalex.org/W2047159195","https://openalex.org/W2078919477","https://openalex.org/W2087689873","https://openalex.org/W2096173332","https://openalex.org/W2137425461","https://openalex.org/W2142755954","https://openalex.org/W2166101849","https://openalex.org/W2190404250","https://openalex.org/W2295598076","https://openalex.org/W2303309927","https://openalex.org/W2463218221","https://openalex.org/W2555686718","https://openalex.org/W2574456047","https://openalex.org/W2596198811","https://openalex.org/W2614627885","https://openalex.org/W2787225914","https://openalex.org/W2801453221","https://openalex.org/W2892812660","https://openalex.org/W2908494896","https://openalex.org/W2909472027","https://openalex.org/W2916749909","https://openalex.org/W2925616201","https://openalex.org/W2944540884","https://openalex.org/W2950434449","https://openalex.org/W2950985821","https://openalex.org/W2954515343","https://openalex.org/W2964236544","https://openalex.org/W2964304355","https://openalex.org/W2966446212","https://openalex.org/W2970565181","https://openalex.org/W2970771711","https://openalex.org/W2975619549","https://openalex.org/W2983869592","https://openalex.org/W2986788348","https://openalex.org/W2990565882","https://openalex.org/W2999872367","https://openalex.org/W3027007076","https://openalex.org/W3036962145","https://openalex.org/W3037216933","https://openalex.org/W3048417086","https://openalex.org/W3048631361","https://openalex.org/W3094386380","https://openalex.org/W3102692100","https://openalex.org/W3105555637","https://openalex.org/W3105917880","https://openalex.org/W3110253137","https://openalex.org/W3112212292","https://openalex.org/W3115495889","https://openalex.org/W3117394058","https://openalex.org/W3129840527","https://openalex.org/W3135035839","https://openalex.org/W3139601120","https://openalex.org/W3153691873","https://openalex.org/W3158340440","https://openalex.org/W3165350110","https://openalex.org/W3170986249","https://openalex.org/W3173599183","https://openalex.org/W3173875945","https://openalex.org/W3176966473","https://openalex.org/W3193996240","https://openalex.org/W3198168376","https://openalex.org/W3208451731","https://openalex.org/W3213224786","https://openalex.org/W4200513698","https://openalex.org/W4206348828","https://openalex.org/W4210870577","https://openalex.org/W4223591189","https://openalex.org/W4239510810","https://openalex.org/W4249477935","https://openalex.org/W4252208101","https://openalex.org/W4291286390","https://openalex.org/W4296478810","https://openalex.org/W4296800293","https://openalex.org/W4300862723","https://openalex.org/W4307091806","https://openalex.org/W4312946813","https://openalex.org/W4313472909","https://openalex.org/W4318561805","https://openalex.org/W4323294508","https://openalex.org/W4386438505","https://openalex.org/W6766978945","https://openalex.org/W6790580958"],"related_works":["https://openalex.org/W2899084033","https://openalex.org/W2017899917","https://openalex.org/W2080571363","https://openalex.org/W2481322495","https://openalex.org/W2898682754","https://openalex.org/W2889841093","https://openalex.org/W2151082141","https://openalex.org/W2365236913","https://openalex.org/W3194374240","https://openalex.org/W2993861175"],"abstract_inverted_index":{"Multi-omics":[0],"integration":[1,96],"has":[2],"demonstrated":[3],"promising":[4],"performance":[5,73,213],"in":[6,34,176],"complex":[7],"disease":[8,46,128,161],"prediction.":[9],"However,":[10],"existing":[11],"research":[12],"typically":[13],"focuses":[14],"on":[15,80],"maximizing":[16],"prediction":[17,66,72],"accuracy,":[18],"while":[19],"often":[20,38],"neglecting":[21],"the":[22,65,95,103,118,131,164,170,190,199,204,211],"essential":[23],"task":[24],"of":[25,97,192,203,214],"discovering":[26],"meaningful":[27],"biomarkers.":[28],"This":[29],"issue":[30],"is":[31],"particularly":[32],"important":[33],"biomedicine,":[35],"as":[36,207,209],"molecules":[37],"interact":[39],"rather":[40],"than":[41],"function":[42],"individually":[43],"to":[44,58,70,84,106,126,150,160],"influence":[45],"outcomes.":[47],"To":[48],"this":[49],"end,":[50],"we":[51,68,121],"propose":[52,69,122],"a":[53,76,98,123,136],"two-phase":[54],"framework":[55,172],"named":[56],"GREMI":[57],"assist":[59],"multi-omics":[60],"classification":[61,109,179,212],"and":[62,102,114,140,154,181,201],"explanation.":[63],"In":[64,117],"phase,":[67,120],"improve":[71],"by":[74,94],"employing":[75],"graph":[77],"attention":[78],"architecture":[79],"sample-wise":[81],"co-functional":[82],"networks":[83],"incorporate":[85,144],"biomolecular":[86],"interaction":[87,132],"information":[88],"for":[89],"enhanced":[90],"feature":[91,113],"representation,":[92],"followed":[93],"joint-late":[99],"mixed":[100],"strategy":[101],"true-class-probability":[104],"block":[105],"adaptively":[107],"evaluate":[108],"confidence":[110],"at":[111],"both":[112],"omics":[115,193],"levels.":[116],"interpretation":[119],"multi-view":[124],"approach":[125],"explain":[127],"outcomes":[129],"from":[130,163],"module":[133],"perspective,":[134],"providing":[135],"more":[137],"intuitive":[138],"understanding":[139],"biomedical":[141],"rationale.":[142],"We":[143,196],"Monte":[145],"Carlo":[146],"tree":[147],"search":[148],"(MCTS)":[149],"explore":[151],"local-view":[152],"subgraphs":[153],"pinpoint":[155],"modules":[156,216],"that":[157,169],"highly":[158],"contribute":[159],"characterization":[162],"global-view.":[165],"Extensive":[166],"experiments":[167],"demonstrate":[168],"proposed":[171],"outperforms":[173],"state-of-the-art":[174],"methods":[175],"seven":[177],"different":[178],"tasks,":[180],"our":[182],"model":[183],"effectively":[184],"addresses":[185],"data":[186],"mutual":[187],"interference":[188],"when":[189],"number":[191],"types":[194],"increases.":[195],"further":[197],"illustrate":[198],"functional-":[200],"disease-relevance":[202],"identified":[205],"modules,":[206],"well":[208],"validate":[210],"discovered":[215],"using":[217],"an":[218],"independent":[219],"cohort.":[220]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":11},{"year":2024,"cited_by_count":2}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
