{"id":"https://openalex.org/W4399768250","doi":"https://doi.org/10.1109/jbhi.2024.3415641","title":"MOSGAT: Uniting Specificity-Aware GATs and Cross Modal-Attention to Integrate Multi-Omics Data for Disease Diagnosis","display_name":"MOSGAT: Uniting Specificity-Aware GATs and Cross Modal-Attention to Integrate Multi-Omics Data for Disease Diagnosis","publication_year":2024,"publication_date":"2024-06-18","ids":{"openalex":"https://openalex.org/W4399768250","doi":"https://doi.org/10.1109/jbhi.2024.3415641","pmid":"https://pubmed.ncbi.nlm.nih.gov/38889029"},"language":"en","primary_location":{"id":"doi:10.1109/jbhi.2024.3415641","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2024.3415641","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055241786","display_name":"Wenhao Wu","orcid":"https://orcid.org/0000-0002-2244-6543"},"institutions":[{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Wenhao Wu","raw_affiliation_strings":["School of Computer Science and Technology, China University of Petroleum, Qingdao, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, China University of Petroleum, Qingdao, China","institution_ids":["https://openalex.org/I4210162190"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100389987","display_name":"Shudong Wang","orcid":"https://orcid.org/0000-0003-4360-6718"},"institutions":[{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shudong Wang","raw_affiliation_strings":["School of Computer Science and Technology, China University of Petroleum, Qingdao, China"],"raw_orcid":"https://orcid.org/0000-0003-4360-6718","affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, China University of Petroleum, Qingdao, China","institution_ids":["https://openalex.org/I4210162190"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100746477","display_name":"Yuanyuan Zhang","orcid":"https://orcid.org/0000-0003-3935-3201"},"institutions":[{"id":"https://openalex.org/I44468530","display_name":"Qingdao University of Technology","ror":"https://ror.org/01qzc0f54","country_code":"CN","type":"education","lineage":["https://openalex.org/I44468530"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuanyuan Zhang","raw_affiliation_strings":["School of Information and Control Engineering, Qingdao University of Technology, Qingdao, China"],"raw_orcid":"https://orcid.org/0000-0003-3935-3201","affiliations":[{"raw_affiliation_string":"School of Information and Control Engineering, Qingdao University of Technology, Qingdao, China","institution_ids":["https://openalex.org/I44468530"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101337977","display_name":"Wenjing Yin","orcid":"https://orcid.org/0000-0002-8837-9195"},"institutions":[{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wenjing Yin","raw_affiliation_strings":["School of Computer Science and Technology, China University of Petroleum, Qingdao, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, China University of Petroleum, Qingdao, China","institution_ids":["https://openalex.org/I4210162190"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020070155","display_name":"Yawu Zhao","orcid":"https://orcid.org/0000-0002-7278-3097"},"institutions":[{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yawu Zhao","raw_affiliation_strings":["School of Computer Science and Technology, China University of Petroleum, Qingdao, China"],"raw_orcid":"https://orcid.org/0000-0002-7278-3097","affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, China University of Petroleum, Qingdao, China","institution_ids":["https://openalex.org/I4210162190"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5054060458","display_name":"Shanchen Pang","orcid":null},"institutions":[{"id":"https://openalex.org/I4210162190","display_name":"China University of Petroleum, East China","ror":"https://ror.org/05gbn2817","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210162190"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shanchen Pang","raw_affiliation_strings":["School of Computer Science and Technology, China University of Petroleum, Qingdao, China"],"raw_orcid":"https://orcid.org/0000-0002-5705-1218","affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, China University of Petroleum, Qingdao, China","institution_ids":["https://openalex.org/I4210162190"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5055241786"],"corresponding_institution_ids":["https://openalex.org/I4210162190"],"apc_list":null,"apc_paid":null,"fwci":1.9264,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.85809401,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":98,"max":99},"biblio":{"volume":"28","issue":"9","first_page":"5624","last_page":"5637"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9937000274658203,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6944848299026489},{"id":"https://openalex.org/keywords/omics","display_name":"Omics","score":0.6651344299316406},{"id":"https://openalex.org/keywords/modalities","display_name":"Modalities","score":0.5365740060806274},{"id":"https://openalex.org/keywords/weighting","display_name":"Weighting","score":0.4383885860443115},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.4338788688182831},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.42161136865615845},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3918144702911377},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.36816853284835815},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3543778657913208},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.25922852754592896},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.12561491131782532},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.0966179370880127}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6944848299026489},{"id":"https://openalex.org/C157585117","wikidata":"https://www.wikidata.org/wiki/Q158666","display_name":"Omics","level":2,"score":0.6651344299316406},{"id":"https://openalex.org/C2779903281","wikidata":"https://www.wikidata.org/wiki/Q6888026","display_name":"Modalities","level":2,"score":0.5365740060806274},{"id":"https://openalex.org/C183115368","wikidata":"https://www.wikidata.org/wiki/Q856577","display_name":"Weighting","level":2,"score":0.4383885860443115},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.4338788688182831},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.42161136865615845},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3918144702911377},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.36816853284835815},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3543778657913208},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.25922852754592896},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.12561491131782532},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0966179370880127},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.0},{"id":"https://openalex.org/C36289849","wikidata":"https://www.wikidata.org/wiki/Q34749","display_name":"Social science","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1109/jbhi.2024.3415641","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2024.3415641","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},{"id":"pmid:38889029","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38889029","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE journal of biomedical and health informatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G8912315176","display_name":null,"funder_award_id":"6187328","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":44,"referenced_works":["https://openalex.org/W1881929920","https://openalex.org/W1930624869","https://openalex.org/W2044074081","https://openalex.org/W2130338776","https://openalex.org/W2187089797","https://openalex.org/W2295598076","https://openalex.org/W2339186630","https://openalex.org/W2807463161","https://openalex.org/W2909472027","https://openalex.org/W2921485464","https://openalex.org/W2970565181","https://openalex.org/W2993280565","https://openalex.org/W3003893414","https://openalex.org/W3037355691","https://openalex.org/W3048417086","https://openalex.org/W3048631361","https://openalex.org/W3102692100","https://openalex.org/W3115495889","https://openalex.org/W3120409033","https://openalex.org/W3134931716","https://openalex.org/W3146366485","https://openalex.org/W3156270925","https://openalex.org/W3157999218","https://openalex.org/W3170986249","https://openalex.org/W3173599183","https://openalex.org/W3173875945","https://openalex.org/W3205594709","https://openalex.org/W4224884326","https://openalex.org/W4224926219","https://openalex.org/W4229335505","https://openalex.org/W4239510810","https://openalex.org/W4252208101","https://openalex.org/W4281492015","https://openalex.org/W4296780664","https://openalex.org/W4297121106","https://openalex.org/W4311959699","https://openalex.org/W4312946813","https://openalex.org/W4380742632","https://openalex.org/W4382318546","https://openalex.org/W4385194941","https://openalex.org/W6733328719","https://openalex.org/W6745537798","https://openalex.org/W6780663757","https://openalex.org/W6796149595"],"related_works":["https://openalex.org/W2180954594","https://openalex.org/W2052835778","https://openalex.org/W2049003611","https://openalex.org/W2127804977","https://openalex.org/W2108418243","https://openalex.org/W164103134","https://openalex.org/W2787352659","https://openalex.org/W1970611213","https://openalex.org/W4206560911","https://openalex.org/W4372260270"],"abstract_inverted_index":{"With":[0],"the":[1,6,20,70,124,127,160,163,173],"advancement":[2],"of":[3,8,11,72,162,175],"sequencing":[4],"methodologies,":[5,170],"acquisition":[7],"vast":[9],"amounts":[10],"multi-omics":[12,65],"data":[13,39,66,90,106],"presents":[14],"a":[15,61,77,131],"significant":[16],"opportunity":[17],"for":[18,32,102],"comprehending":[19],"intricate":[21],"biological":[22],"mechanisms":[23],"underlying":[24],"diseases":[25],"and":[26,30,49,83,187],"achieving":[27],"precise":[28],"diagnosis":[29],"treatment":[31],"complex":[33],"disorders.":[34],"However,":[35],"as":[36],"diverse":[37],"omics":[38,47,89,104,147],"are":[40],"integrated,":[41],"extracting":[42,185],"sample-specific":[43],"features":[44,186],"within":[45],"each":[46,103],"modality":[48,105],"exploring":[50,188],"potential":[51,143,189],"correlations":[52,144],"among":[53],"different":[54,88,146],"modalities":[55],"while":[56],"avoiding":[57],"mutual":[58],"interference":[59],"becomes":[60],"critical":[62],"challenge":[63],"in":[64,126,172,184],"integration":[67],"research.":[68],"In":[69],"context":[71],"this":[73],"study,":[74],"we":[75,95],"proposed":[76,164],"framework":[78,165],"that":[79],"unites":[80],"specificity-aware":[81],"GATs":[82],"cross-modal":[84,132],"attention":[85,117,133],"to":[86,107,122,168],"integrate":[87],"(MOSGAT).":[91],"To":[92],"be":[93],"specific,":[94],"devise":[96],"Graph":[97],"Attention":[98],"Networks":[99],"(GATs)":[100],"tailored":[101],"perform":[108],"feature":[109],"extraction":[110],"on":[111,138,153],"samples.":[112],"Additionally,":[113],"an":[114],"adaptive":[115],"confidence":[116,125],"weighting":[118],"technique":[119],"is":[120],"incorporated":[121],"enhance":[123],"extracted":[128],"features.":[129],"Finally,":[130],"mechanism":[134],"was":[135],"devised":[136],"based":[137],"multi-head":[139],"self-attention,":[140],"thoroughly":[141],"uncovering":[142],"between":[145],"data.":[148],"Extensive":[149],"experiments":[150],"were":[151],"conducted":[152],"four":[154],"publicly":[155],"available":[156],"medical":[157],"datasets,":[158],"highlighting":[159],"superiority":[161],"when":[166],"compared":[167],"state-of-the-art":[169],"particularly":[171],"realm":[174],"classification":[176],"tasks.":[177],"The":[178],"experimental":[179],"results":[180],"underscore":[181],"MOSGAT's":[182],"effectiveness":[183],"inter-omics":[190],"associations.":[191]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":7}],"updated_date":"2026-05-16T08:24:45.110214","created_date":"2025-10-10T00:00:00"}
