{"id":"https://openalex.org/W4387951958","doi":"https://doi.org/10.1109/jbhi.2023.3327230","title":"Employing Feature Selection Algorithms to Determine the Immune State of a Mouse Model of Rheumatoid Arthritis","display_name":"Employing Feature Selection Algorithms to Determine the Immune State of a Mouse Model of Rheumatoid Arthritis","publication_year":2023,"publication_date":"2023-10-26","ids":{"openalex":"https://openalex.org/W4387951958","doi":"https://doi.org/10.1109/jbhi.2023.3327230","pmid":"https://pubmed.ncbi.nlm.nih.gov/37883254"},"language":"en","primary_location":{"id":"doi:10.1109/jbhi.2023.3327230","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2023.3327230","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11111100/pdf/nihms-1983582.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5015291499","display_name":"Aleksandr Talitckii","orcid":"https://orcid.org/0000-0002-4214-338X"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Aleksandr Talitckii","raw_affiliation_strings":["School for the Engineering of Matter, Transport and Energy, Arizona State University, Tempe, AZ, USA"],"raw_orcid":"https://orcid.org/0000-0002-4214-338X","affiliations":[{"raw_affiliation_string":"School for the Engineering of Matter, Transport and Energy, Arizona State University, Tempe, AZ, USA","institution_ids":["https://openalex.org/I55732556"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010671304","display_name":"Joslyn L. Mangal","orcid":"https://orcid.org/0000-0003-0774-1066"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joslyn L. Mangal","raw_affiliation_strings":["School for the Engineering of Matter, Transport and Energy, Arizona State University, Tempe, AZ, USA"],"raw_orcid":"https://orcid.org/0000-0003-0774-1066","affiliations":[{"raw_affiliation_string":"School for the Engineering of Matter, Transport and Energy, Arizona State University, Tempe, AZ, USA","institution_ids":["https://openalex.org/I55732556"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025576040","display_name":"Brendon K. Colbert","orcid":"https://orcid.org/0000-0003-1580-555X"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brendon K. Colbert","raw_affiliation_strings":["School for the Engineering of Matter, Transport and Energy, Arizona State University, Tempe, AZ, USA"],"raw_orcid":"https://orcid.org/0000-0003-1580-555X","affiliations":[{"raw_affiliation_string":"School for the Engineering of Matter, Transport and Energy, Arizona State University, Tempe, AZ, USA","institution_ids":["https://openalex.org/I55732556"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059638560","display_name":"Abhinav P. Acharya","orcid":"https://orcid.org/0000-0002-9361-2764"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Abhinav P. Acharya","raw_affiliation_strings":["School for the Engineering of Matter, Transport and Energy, Arizona State University, Tempe, AZ, USA"],"raw_orcid":"https://orcid.org/0000-0002-9361-2764","affiliations":[{"raw_affiliation_string":"School for the Engineering of Matter, Transport and Energy, Arizona State University, Tempe, AZ, USA","institution_ids":["https://openalex.org/I55732556"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077552862","display_name":"Matthew M. Peet","orcid":"https://orcid.org/0000-0001-9360-6738"},"institutions":[{"id":"https://openalex.org/I55732556","display_name":"Arizona State University","ror":"https://ror.org/03efmqc40","country_code":"US","type":"education","lineage":["https://openalex.org/I55732556"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew M. Peet","raw_affiliation_strings":["School for the Engineering of Matter, Transport and Energy, Arizona State University, Tempe, AZ, USA"],"raw_orcid":"https://orcid.org/0000-0001-9360-6738","affiliations":[{"raw_affiliation_string":"School for the Engineering of Matter, Transport and Energy, Arizona State University, Tempe, AZ, USA","institution_ids":["https://openalex.org/I55732556"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5015291499"],"corresponding_institution_ids":["https://openalex.org/I55732556"],"apc_list":null,"apc_paid":null,"fwci":0.8947,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.76070044,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"28","issue":"4","first_page":"1906","last_page":"1916"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":0.9950000047683716,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":0.9950000047683716,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12867","display_name":"Advanced Biosensing Techniques and Applications","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11503","display_name":"Cytokine Signaling Pathways and Interactions","score":0.992900013923645,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/rheumatoid-arthritis","display_name":"Rheumatoid arthritis","score":0.7197068929672241},{"id":"https://openalex.org/keywords/immunotherapy","display_name":"Immunotherapy","score":0.6935818195343018},{"id":"https://openalex.org/keywords/immune-system","display_name":"Immune system","score":0.523627519607544},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5021796226501465},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.4680706262588501},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.46797946095466614},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.45423999428749084},{"id":"https://openalex.org/keywords/arthritis","display_name":"Arthritis","score":0.45310917496681213},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.353230357170105},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.33812516927719116},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2124725878238678}],"concepts":[{"id":"https://openalex.org/C2777575956","wikidata":"https://www.wikidata.org/wiki/Q187255","display_name":"Rheumatoid arthritis","level":2,"score":0.7197068929672241},{"id":"https://openalex.org/C2777701055","wikidata":"https://www.wikidata.org/wiki/Q1427096","display_name":"Immunotherapy","level":3,"score":0.6935818195343018},{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.523627519607544},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5021796226501465},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.4680706262588501},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.46797946095466614},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.45423999428749084},{"id":"https://openalex.org/C2777077863","wikidata":"https://www.wikidata.org/wiki/Q170990","display_name":"Arthritis","level":2,"score":0.45310917496681213},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.353230357170105},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.33812516927719116},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2124725878238678},{"id":"https://openalex.org/C99454951","wikidata":"https://www.wikidata.org/wiki/Q932068","display_name":"Environmental health","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/jbhi.2023.3327230","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2023.3327230","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},{"id":"pmid:37883254","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37883254","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE journal of biomedical and health informatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11111100","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11111100","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11111100/pdf/nihms-1983582.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE J Biomed Health Inform","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:11111100","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11111100","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11111100/pdf/nihms-1983582.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE J Biomed Health Inform","raw_type":"Text"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/16","display_name":"Peace, Justice and strong institutions","score":0.7400000095367432}],"awards":[{"id":"https://openalex.org/G1056262801","display_name":null,"funder_award_id":"1931270","funder_id":"https://openalex.org/F4320335353","funder_display_name":"National Science Foundation of Sri Lanka"},{"id":"https://openalex.org/G2674963493","display_name":"A Convex Computational Framework for Understanding and Controlling Nonlinear Systems","funder_award_id":"1931270","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3971095939","display_name":null,"funder_award_id":"R01AI155907","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4073132239","display_name":null,"funder_award_id":"1935453","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6197508636","display_name":null,"funder_award_id":"1935453","funder_id":"https://openalex.org/F4320335353","funder_display_name":"National Science Foundation of Sri Lanka"},{"id":"https://openalex.org/G6938928801","display_name":null,"funder_award_id":"R01GM144966","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G727669506","display_name":null,"funder_award_id":"R01AR078343","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320335353","display_name":"National Science Foundation of Sri Lanka","ror":"https://ror.org/010xaa060"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4387951958.pdf"},"referenced_works_count":29,"referenced_works":["https://openalex.org/W1181109550","https://openalex.org/W1545453017","https://openalex.org/W1594031697","https://openalex.org/W1995234326","https://openalex.org/W2010043809","https://openalex.org/W2038399694","https://openalex.org/W2074986607","https://openalex.org/W2118142823","https://openalex.org/W2122347864","https://openalex.org/W2143426320","https://openalex.org/W2149772057","https://openalex.org/W2167101736","https://openalex.org/W2560758606","https://openalex.org/W2561520100","https://openalex.org/W2612761764","https://openalex.org/W2773023960","https://openalex.org/W3011710052","https://openalex.org/W3013114425","https://openalex.org/W3022444899","https://openalex.org/W3194780424","https://openalex.org/W3202344004","https://openalex.org/W4249247926","https://openalex.org/W4300690907","https://openalex.org/W4311711274","https://openalex.org/W4360599651","https://openalex.org/W4361002237","https://openalex.org/W4366342188","https://openalex.org/W4380739442","https://openalex.org/W6775533395"],"related_works":["https://openalex.org/W2185550546","https://openalex.org/W2416097977","https://openalex.org/W2028766184","https://openalex.org/W2993678931","https://openalex.org/W2384738060","https://openalex.org/W3045583548","https://openalex.org/W812086887","https://openalex.org/W2101475263","https://openalex.org/W4312109267","https://openalex.org/W4386016105"],"abstract_inverted_index":{"The":[0,19,44],"immune":[1,60],"response":[2],"is":[3,15,25,56,105,130],"a":[4,127,149,173,188],"dynamic":[5,23],"process":[6,24,104],"by":[7,27,109],"which":[8,38,129,195],"the":[9,28,59,65,75,85,88,97,110,113,116,119,122,141,202,213],"body":[10],"determines":[11],"whether":[12],"an":[13],"antigen":[14],"self":[16],"or":[17],"nonself.":[18],"state":[20,61,117,128],"of":[21,33,46,64,87,99,112,118,124,140,152,168,192,205,215],"this":[22,40,94,100,103,193],"defined":[26],"relative":[29],"balance":[30],"and":[31,35,166,179,209],"population":[32],"inflammatory":[34],"regulatory":[36,66],"actors":[37,67],"comprise":[39],"decision":[41],"making":[42],"process.":[43],"goal":[45],"immunotherapy":[47,176,216],"as":[48],"applied":[49],"to,":[50],"e.g.":[51],"Rheumatoid":[52],"Arthritis":[53,155],"(RA),":[54],"then,":[55],"to":[57,83,135,138,186,199],"bias":[58],"in":[62,74,184],"favor":[63],"-":[68,126],"thereby":[69],"shutting":[70],"down":[71],"autoimmune":[72],"pathways":[73],"response.":[76],"While":[77],"there":[78],"are":[79],"several":[80],"known":[81],"approaches":[82],"immunotherapy,":[84],"effectiveness":[86],"therapy":[89],"will":[90],"depend":[91],"on":[92,162],"how":[93],"intervention":[95,125],"alters":[96],"evolution":[98],"state.":[101],"Unfortunately,":[102],"determined":[106],"not":[107,133],"only":[108],"dynamics":[111],"process,":[114],"but":[115],"system":[120],"at":[121],"time":[123],"difficult":[131],"if":[132],"impossible":[134],"determine":[136],"prior":[137],"application":[139],"therapy.":[142],"To":[143],"identify":[144],"such":[145],"states":[146],"we":[147],"consider":[148],"mouse":[150],"model":[151],"RA":[153],"(Collagen-Induced":[154],"(CIA))":[156],"immunotherapy;":[157],"collect":[158],"high":[159],"dimensional":[160,190],"data":[161,194],"T":[163,206],"cell":[164,207],"markers":[165,208],"populations":[167],"mice":[169],"after":[170],"treatment":[171],"with":[172,212],"recently":[174],"developed":[175],"for":[177],"CIA;":[178],"use":[180],"feature":[181],"selection":[182],"algorithms":[183],"order":[185],"select":[187],"lower":[189],"subset":[191],"can":[196],"be":[197],"used":[198],"predict":[200],"both":[201],"full":[203],"set":[204],"populations,":[210],"along":[211],"efficacy":[214],"treatment.":[217]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":1}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2023-10-27T00:00:00"}
