{"id":"https://openalex.org/W3214305858","doi":"https://doi.org/10.1109/jbhi.2021.3125573","title":"Data Integration Using Tensor Decomposition for the Prediction of miRNA-Disease Associations","display_name":"Data Integration Using Tensor Decomposition for the Prediction of miRNA-Disease Associations","publication_year":2021,"publication_date":"2021-11-08","ids":{"openalex":"https://openalex.org/W3214305858","doi":"https://doi.org/10.1109/jbhi.2021.3125573","mag":"3214305858","pmid":"https://pubmed.ncbi.nlm.nih.gov/34748505"},"language":"en","primary_location":{"id":"doi:10.1109/jbhi.2021.3125573","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2021.3125573","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5026469278","display_name":"Jiawei Luo","orcid":"https://orcid.org/0000-0003-2385-8272"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"JiaWei Luo","raw_affiliation_strings":["College of Computer Science and Electronic Engineering, Hunan University, Changsha, China"],"raw_orcid":"https://orcid.org/0000-0003-2385-8272","affiliations":[{"raw_affiliation_string":"College of Computer Science and Electronic Engineering, Hunan University, Changsha, China","institution_ids":["https://openalex.org/I16609230"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101572441","display_name":"Yi Liu","orcid":"https://orcid.org/0000-0003-4196-9865"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yi Liu","raw_affiliation_strings":["College of Computer Science and Electronic Engineering, Hunan University, Changsha, China"],"raw_orcid":"https://orcid.org/0000-0003-4196-9865","affiliations":[{"raw_affiliation_string":"College of Computer Science and Electronic Engineering, Hunan University, Changsha, China","institution_ids":["https://openalex.org/I16609230"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101442903","display_name":"Pei Liu","orcid":"https://orcid.org/0000-0002-2828-8179"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Pei Liu","raw_affiliation_strings":["College of Computer Science and Electronic Engineering, Hunan University, Changsha, China"],"raw_orcid":"https://orcid.org/0000-0002-2828-8179","affiliations":[{"raw_affiliation_string":"College of Computer Science and Electronic Engineering, Hunan University, Changsha, China","institution_ids":["https://openalex.org/I16609230"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055888636","display_name":"Zihan Lai","orcid":null},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zihan Lai","raw_affiliation_strings":["College of Computer Science and Electronic Engineering, Hunan University, Changsha, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Electronic Engineering, Hunan University, Changsha, China","institution_ids":["https://openalex.org/I16609230"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5047737556","display_name":"Hao Wu","orcid":"https://orcid.org/0000-0002-4138-1239"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hao Wu","raw_affiliation_strings":["College of Computer Science and Electronic Engineering, Hunan University, Changsha, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Electronic Engineering, Hunan University, Changsha, China","institution_ids":["https://openalex.org/I16609230"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5026469278"],"corresponding_institution_ids":["https://openalex.org/I16609230"],"apc_list":null,"apc_paid":null,"fwci":1.0494,"has_fulltext":false,"cited_by_count":14,"citation_normalized_percentile":{"value":0.73566482,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":98},"biblio":{"volume":"26","issue":"5","first_page":"2370","last_page":"2378"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9932000041007996,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.992900013923645,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.5952740907669067},{"id":"https://openalex.org/keywords/tensor","display_name":"Tensor (intrinsic definition)","score":0.5877730250358582},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5524675250053406},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.5076292753219604},{"id":"https://openalex.org/keywords/tensor-decomposition","display_name":"Tensor decomposition","score":0.49931812286376953},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.49737051129341125},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3781639337539673},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3504667580127716},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.33193472027778625},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.31817203760147095},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2945578992366791},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2531658411026001},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2252834141254425},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.20906898379325867},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.08865734934806824}],"concepts":[{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.5952740907669067},{"id":"https://openalex.org/C155281189","wikidata":"https://www.wikidata.org/wiki/Q3518150","display_name":"Tensor (intrinsic definition)","level":2,"score":0.5877730250358582},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5524675250053406},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.5076292753219604},{"id":"https://openalex.org/C2986737658","wikidata":"https://www.wikidata.org/wiki/Q30103009","display_name":"Tensor decomposition","level":3,"score":0.49931812286376953},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.49737051129341125},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3781639337539673},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3504667580127716},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.33193472027778625},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.31817203760147095},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2945578992366791},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2531658411026001},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2252834141254425},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.20906898379325867},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.08865734934806824},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1109/jbhi.2021.3125573","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2021.3125573","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},{"id":"pmid:34748505","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34748505","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE journal of biomedical and health informatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Partnerships for the goals","score":0.4300000071525574,"id":"https://metadata.un.org/sdg/17"}],"awards":[{"id":"https://openalex.org/G1342612824","display_name":null,"funder_award_id":"61873089","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6549098544","display_name":null,"funder_award_id":"62032007","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":47,"referenced_works":["https://openalex.org/W144423133","https://openalex.org/W1775749144","https://openalex.org/W2016763472","https://openalex.org/W2027025742","https://openalex.org/W2040851473","https://openalex.org/W2041073071","https://openalex.org/W2049588365","https://openalex.org/W2070777085","https://openalex.org/W2103151642","https://openalex.org/W2106689491","https://openalex.org/W2132694427","https://openalex.org/W2343107734","https://openalex.org/W2528907418","https://openalex.org/W2535406655","https://openalex.org/W2537679995","https://openalex.org/W2544822491","https://openalex.org/W2750900465","https://openalex.org/W2768632638","https://openalex.org/W2793425238","https://openalex.org/W2798045697","https://openalex.org/W2807490780","https://openalex.org/W2809363952","https://openalex.org/W2885000925","https://openalex.org/W2885427291","https://openalex.org/W2888000869","https://openalex.org/W2890728516","https://openalex.org/W2895031534","https://openalex.org/W2898440040","https://openalex.org/W2899728356","https://openalex.org/W2902246085","https://openalex.org/W2904881507","https://openalex.org/W2911419886","https://openalex.org/W2912896532","https://openalex.org/W2950834624","https://openalex.org/W3000082418","https://openalex.org/W3003416491","https://openalex.org/W3010217868","https://openalex.org/W3042539409","https://openalex.org/W3045644454","https://openalex.org/W3081731373","https://openalex.org/W3099047675","https://openalex.org/W3146565636","https://openalex.org/W4213060373","https://openalex.org/W4246271082","https://openalex.org/W4255156463","https://openalex.org/W6608344535","https://openalex.org/W6729203000"],"related_works":["https://openalex.org/W4379256054","https://openalex.org/W2093953080","https://openalex.org/W2911706637","https://openalex.org/W47805180","https://openalex.org/W3216281372","https://openalex.org/W2963838862","https://openalex.org/W2608089480","https://openalex.org/W3015641590","https://openalex.org/W2987657992","https://openalex.org/W4297666106"],"abstract_inverted_index":{"Dysfunction":[0],"of":[1,18,28,44,47,84,89,95,131],"miRNAs":[2,16,31],"has":[3],"an":[4],"important":[5],"relationship":[6],"with":[7,104,135],"diseases":[8,33],"by":[9],"impacting":[10],"their":[11],"target":[12],"genes.":[13],"Identifying":[14],"disease-related":[15],"is":[17,41,107,133,148],"great":[19],"significance":[20],"to":[21,65,80,109],"prevent":[22],"and":[23,92,118,126],"treat":[24],"diseases.":[25],"Integrating":[26],"information":[27,106,121,125],"genes":[29],"related":[30],"and/or":[32],"in":[34,51],"calculational":[35],"methods":[36,138],"for":[37,69,114],"miRNA-disease":[38,85,116],"association":[39,78,112],"studies":[40],"meaningful":[42],"because":[43],"the":[45,82,87,93,111,119,146],"complexity":[46],"biological":[48,123],"mechanisms.":[49],"Therefore,":[50],"this":[52],"study,":[53],"we":[54,74],"propose":[55],"a":[56,76,100,149],"novel":[57],"method":[58,103],"based":[59],"on":[60],"tensor":[61,79,101,113],"decomposition,":[62],"termed":[63],"TDMDA,":[64],"integrate":[66],"multi-type":[67],"data":[68],"identifying":[70],"pathogenic":[71],"miRNAs.":[72],"First,":[73],"construct":[75],"three-order":[77],"express":[81],"associations":[83,88,94],"pairs,":[86,91],"miRNA-gene":[90],"gene-disease":[96],"pairs":[97],"simultaneously.":[98],"Then,":[99],"decomposition-based":[102],"auxiliary":[105,120],"applied":[108],"reconstruct":[110],"predicting":[115],"associations,":[117],"includes":[122],"similarity":[124],"adjacency":[127],"information.":[128],"The":[129,142],"performance":[130],"TDMDA":[132,147],"compared":[134],"other":[136],"advanced":[137],"under":[139],"5-fold":[140],"cross-validations.":[141],"experimental":[143],"results":[144],"indicate":[145],"competitive":[150],"method.":[151]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":3}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
