{"id":"https://openalex.org/W2775980091","doi":"https://doi.org/10.1109/jbhi.2017.2784898","title":"Simultaneous Clustering and Feature Weighting Using Multiobjective Optimization for Identifying Functionally Similar miRNAs","display_name":"Simultaneous Clustering and Feature Weighting Using Multiobjective Optimization for Identifying Functionally Similar miRNAs","publication_year":2017,"publication_date":"2017-12-19","ids":{"openalex":"https://openalex.org/W2775980091","doi":"https://doi.org/10.1109/jbhi.2017.2784898","mag":"2775980091","pmid":"https://pubmed.ncbi.nlm.nih.gov/29990050"},"language":"en","primary_location":{"id":"doi:10.1109/jbhi.2017.2784898","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2017.2784898","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5060797340","display_name":"Sriparna Saha","orcid":"https://orcid.org/0000-0001-5458-9381"},"institutions":[{"id":"https://openalex.org/I132153292","display_name":"Indian Institute of Technology Patna","ror":"https://ror.org/01ft5vz71","country_code":"IN","type":"education","lineage":["https://openalex.org/I132153292"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Sriparna Saha","raw_affiliation_strings":["Department of Computer Science and Engineering, Indian Institute of Technology Patna, Patna, India"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Indian Institute of Technology Patna, Patna, India","institution_ids":["https://openalex.org/I132153292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025504496","display_name":"Sudipta Acharya","orcid":"https://orcid.org/0000-0002-3014-0907"},"institutions":[{"id":"https://openalex.org/I132153292","display_name":"Indian Institute of Technology Patna","ror":"https://ror.org/01ft5vz71","country_code":"IN","type":"education","lineage":["https://openalex.org/I132153292"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Sudipta Acharya","raw_affiliation_strings":["Department of Computer Science and Engineering, Indian Institute of Technology Patna, Patna, India"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Indian Institute of Technology Patna, Patna, India","institution_ids":["https://openalex.org/I132153292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103152658","display_name":"K. Ch. Sri Kavya","orcid":null},"institutions":[{"id":"https://openalex.org/I132153292","display_name":"Indian Institute of Technology Patna","ror":"https://ror.org/01ft5vz71","country_code":"IN","type":"education","lineage":["https://openalex.org/I132153292"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Kavya K","raw_affiliation_strings":["Department of Computer Science and Engineering, Indian Institute of Technology Patna, Patna, India"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Indian Institute of Technology Patna, Patna, India","institution_ids":["https://openalex.org/I132153292"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5115598826","display_name":"Saisree Miriyala","orcid":"https://orcid.org/0000-0001-8009-4796"},"institutions":[{"id":"https://openalex.org/I132153292","display_name":"Indian Institute of Technology Patna","ror":"https://ror.org/01ft5vz71","country_code":"IN","type":"education","lineage":["https://openalex.org/I132153292"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Saisree Miriyala","raw_affiliation_strings":["Department of Computer Science and Engineering, Indian Institute of Technology Patna, Patna, India"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Indian Institute of Technology Patna, Patna, India","institution_ids":["https://openalex.org/I132153292"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5060797340"],"corresponding_institution_ids":["https://openalex.org/I132153292"],"apc_list":null,"apc_paid":null,"fwci":0.4256,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.59060219,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"22","issue":"5","first_page":"1684","last_page":"1690"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9574999809265137,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.7658846378326416},{"id":"https://openalex.org/keywords/weighting","display_name":"Weighting","score":0.7584213018417358},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.6325754523277283},{"id":"https://openalex.org/keywords/silhouette","display_name":"Silhouette","score":0.6319210529327393},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5744609832763672},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5338168144226074},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4874892234802246},{"id":"https://openalex.org/keywords/rand-index","display_name":"Rand index","score":0.45999324321746826},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.396803617477417},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.36507970094680786}],"concepts":[{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.7658846378326416},{"id":"https://openalex.org/C183115368","wikidata":"https://www.wikidata.org/wiki/Q856577","display_name":"Weighting","level":2,"score":0.7584213018417358},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.6325754523277283},{"id":"https://openalex.org/C58103923","wikidata":"https://www.wikidata.org/wiki/Q2286025","display_name":"Silhouette","level":2,"score":0.6319210529327393},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5744609832763672},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5338168144226074},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4874892234802246},{"id":"https://openalex.org/C111442797","wikidata":"https://www.wikidata.org/wiki/Q7291446","display_name":"Rand index","level":3,"score":0.45999324321746826},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.396803617477417},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.36507970094680786},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1109/jbhi.2017.2784898","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2017.2784898","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},{"id":"pmid:29990050","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29990050","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE journal of biomedical and health informatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":35,"referenced_works":["https://openalex.org/W1500772990","https://openalex.org/W1502792772","https://openalex.org/W1699954493","https://openalex.org/W1769049279","https://openalex.org/W1792069146","https://openalex.org/W1976208596","https://openalex.org/W1987971958","https://openalex.org/W1988866597","https://openalex.org/W1992339951","https://openalex.org/W2022326327","https://openalex.org/W2023971898","https://openalex.org/W2045901802","https://openalex.org/W2047555270","https://openalex.org/W2051224630","https://openalex.org/W2054232099","https://openalex.org/W2060259161","https://openalex.org/W2061784128","https://openalex.org/W2069046167","https://openalex.org/W2076358430","https://openalex.org/W2080390103","https://openalex.org/W2084237514","https://openalex.org/W2104492856","https://openalex.org/W2108031918","https://openalex.org/W2108323654","https://openalex.org/W2115831762","https://openalex.org/W2120529703","https://openalex.org/W2126105956","https://openalex.org/W2130979840","https://openalex.org/W2131435419","https://openalex.org/W2135187880","https://openalex.org/W2153598678","https://openalex.org/W2513485182","https://openalex.org/W2610904283","https://openalex.org/W4405648227","https://openalex.org/W6637940469"],"related_works":["https://openalex.org/W2874540278","https://openalex.org/W2411800789","https://openalex.org/W1998797251","https://openalex.org/W2762277149","https://openalex.org/W3193885920","https://openalex.org/W3217508798","https://openalex.org/W3001448194","https://openalex.org/W4285805267","https://openalex.org/W4366975024","https://openalex.org/W4309269856"],"abstract_inverted_index":{"MicroRNAs":[0],"(miRNAs)":[1],"are":[2,8,33,43,87,97,173,224],"a":[3,30,91,100,182],"type":[4],"of":[5,38,61,73,94,129,132,159,193,212],"RNAs,":[6],"which":[7,84],"responsible":[9],"for":[10,77,99,135],"monitoring":[11],"the":[12,118,124,127,142,146,152,156,176,194],"gene":[13],"expression":[14,85,95],"values.":[15],"Recent":[16],"research":[17],"asserts":[18],"that":[19,54,180],"miRNAs":[20,27,62],"form":[21],"some":[22,68,207,213],"clustering":[23,60],"on":[24,67,199],"chromosomes.":[25],"The":[26,48,191,222],"belonging":[28],"to":[29,83,112,116,206],"particular":[31],"cluster":[32,170],"highly":[34],"similar":[35],"in":[36,204,210],"terms":[37,211],"their":[39],"activity":[40],"and":[41,139,220,229],"they":[42],"termed":[44],"as":[45,164,175],"\"coregulated\"":[46],"miRNAs.":[47,122],"current":[49,125],"paper":[50],"presents":[51],"an":[52,165],"approach":[53],"simultaneously":[55],"performs":[56],"two":[57,121],"tasks:":[58],"i)":[59],"into":[63],"different":[64,78,136],"categories":[65],"based":[66,186],"similarity":[69,119,153],"measures":[70,216],"ii)":[71],"identification":[72],"proper":[74,130,143],"weight":[75,133,160],"values":[76,86,96,107,134,161],"time":[79,137],"points":[80,138],"with":[81],"respect":[82],"available.":[88],"In":[89,123],"general,":[90],"large":[92],"number":[93],"available":[98,236],"given":[101,147],"miRNA":[102,148,201],"data":[103,149,202],"set.":[104],"All":[105],"these":[106],"may":[108],"not":[109],"be":[110,113],"suitable":[111],"used":[114],"equally":[115],"measure":[117],"between":[120],"study,":[126],"problem":[128,167],"selection":[131],"then":[140],"determining":[141],"partitioning":[144],"from":[145],"set":[150,158],"utilizing":[151],"computed":[154],"using":[155],"new":[157],"is":[162,189,197,235],"formulated":[163],"optimization":[166,187],"where":[168],"several":[169],"validity":[171],"indices":[172],"optimized":[174],"goodness":[177],"measures.":[178],"To":[179],"end,":[181],"multiobjective":[183],"differential":[184],"evolution":[185],"technique":[188,196],"utilized.":[190],"supremacy":[192],"proposed":[195],"tested":[198],"three":[200],"sets":[203],"comparison":[205],"recent":[208],"approaches":[209],"popular":[214],"performance":[215],"like":[217],"Silhouette":[218],"index":[219],"DB-index.":[221],"observations":[223],"further":[225],"supported":[226],"by":[227],"statistical":[228],"biological":[230],"significance":[231],"tests.":[232],"Supplementary":[233],"information":[234],"at":[237],"https://www.iitp.ac.in/~sriparna/journals.html.":[238]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
