{"id":"https://openalex.org/W2067732019","doi":"https://doi.org/10.1109/jbhi.2013.2292591","title":"Using Common Table Expressions to Build a Scalable Boolean Query Generator for Clinical Data Warehouses","display_name":"Using Common Table Expressions to Build a Scalable Boolean Query Generator for Clinical Data Warehouses","publication_year":2014,"publication_date":"2014-01-31","ids":{"openalex":"https://openalex.org/W2067732019","doi":"https://doi.org/10.1109/jbhi.2013.2292591","mag":"2067732019"},"language":"en","primary_location":{"id":"doi:10.1109/jbhi.2013.2292591","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2013.2292591","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4386600","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5013578015","display_name":"Daniel R. Harris","orcid":"https://orcid.org/0000-0001-9139-3433"},"institutions":[{"id":"https://openalex.org/I143302722","display_name":"University of Kentucky","ror":"https://ror.org/02k3smh20","country_code":"US","type":"education","lineage":["https://openalex.org/I143302722"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Daniel R. Harris","raw_affiliation_strings":["Department of Computer Science, University of Kentucky, Lexington, KY, USA","Department of Computer Science and the Center for Clinical and Translation Science at the University of Kentucky, Lexington, KY, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Kentucky, Lexington, KY, USA","institution_ids":["https://openalex.org/I143302722"]},{"raw_affiliation_string":"Department of Computer Science and the Center for Clinical and Translation Science at the University of Kentucky, Lexington, KY, USA","institution_ids":["https://openalex.org/I143302722"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025475652","display_name":"Darren W. Henderson","orcid":"https://orcid.org/0000-0001-6198-1912"},"institutions":[{"id":"https://openalex.org/I143302722","display_name":"University of Kentucky","ror":"https://ror.org/02k3smh20","country_code":"US","type":"education","lineage":["https://openalex.org/I143302722"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Darren W. Henderson","raw_affiliation_strings":["Center for Clinical and Translation Science, University of Kentucky, Lexington, KY, USA","Center for Clinical and Translation Science at the University of Kentucky, Lexington, KY, USA"],"affiliations":[{"raw_affiliation_string":"Center for Clinical and Translation Science, University of Kentucky, Lexington, KY, USA","institution_ids":["https://openalex.org/I143302722"]},{"raw_affiliation_string":"Center for Clinical and Translation Science at the University of Kentucky, Lexington, KY, USA","institution_ids":["https://openalex.org/I143302722"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020481922","display_name":"Ramakanth Kavuluru","orcid":"https://orcid.org/0000-0003-1238-9378"},"institutions":[{"id":"https://openalex.org/I143302722","display_name":"University of Kentucky","ror":"https://ror.org/02k3smh20","country_code":"US","type":"education","lineage":["https://openalex.org/I143302722"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ramakanth Kavuluru","raw_affiliation_strings":["Division of Biomedical Informatics, University of Kentucky, Lexington, KY, USA","Division of Biomedical Informatics, Department of Biostatistics, College of Public Health, University of Kentucky, Lexington, KY, USA"],"affiliations":[{"raw_affiliation_string":"Division of Biomedical Informatics, University of Kentucky, Lexington, KY, USA","institution_ids":["https://openalex.org/I143302722"]},{"raw_affiliation_string":"Division of Biomedical Informatics, Department of Biostatistics, College of Public Health, University of Kentucky, Lexington, KY, USA","institution_ids":["https://openalex.org/I143302722"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067935460","display_name":"Arnold J. Stromberg","orcid":"https://orcid.org/0000-0003-0336-9789"},"institutions":[{"id":"https://openalex.org/I103163165","display_name":"Florida State University","ror":"https://ror.org/05g3dte14","country_code":"US","type":"education","lineage":["https://openalex.org/I103163165"]},{"id":"https://openalex.org/I143302722","display_name":"University of Kentucky","ror":"https://ror.org/02k3smh20","country_code":"US","type":"education","lineage":["https://openalex.org/I143302722"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Arnold J. Stromberg","raw_affiliation_strings":["Department of Statistics, University of Kentucky, Lexington, KY, USA","Department of Statistics; College of Arts and Sciences; University of Kentucky; Lexington KY USA"],"affiliations":[{"raw_affiliation_string":"Department of Statistics, University of Kentucky, Lexington, KY, USA","institution_ids":["https://openalex.org/I143302722"]},{"raw_affiliation_string":"Department of Statistics; College of Arts and Sciences; University of Kentucky; Lexington KY USA","institution_ids":["https://openalex.org/I103163165"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5018141140","display_name":"Todd R. Johnson","orcid":"https://orcid.org/0000-0002-6189-463X"},"institutions":[{"id":"https://openalex.org/I143302722","display_name":"University of Kentucky","ror":"https://ror.org/02k3smh20","country_code":"US","type":"education","lineage":["https://openalex.org/I143302722"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Todd R. Johnson","raw_affiliation_strings":["Division of Biomedical Informatics, University of Kentucky, Lexington, KY, USA","Division of Biomedical Informatics, Department of Biostatistics, College of Public Health, University of Kentucky, Lexington, KY, USA"],"affiliations":[{"raw_affiliation_string":"Division of Biomedical Informatics, University of Kentucky, Lexington, KY, USA","institution_ids":["https://openalex.org/I143302722"]},{"raw_affiliation_string":"Division of Biomedical Informatics, Department of Biostatistics, College of Public Health, University of Kentucky, Lexington, KY, USA","institution_ids":["https://openalex.org/I143302722"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5013578015"],"corresponding_institution_ids":["https://openalex.org/I143302722"],"apc_list":null,"apc_paid":null,"fwci":6.0963,"has_fulltext":false,"cited_by_count":11,"citation_normalized_percentile":{"value":0.96440324,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"18","issue":"5","first_page":"1607","last_page":"1613"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11719","display_name":"Data Quality and Management","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1803","display_name":"Management Science and Operations Research"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10317","display_name":"Advanced Database Systems and Queries","score":0.9909999966621399,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.801950991153717},{"id":"https://openalex.org/keywords/sql","display_name":"SQL","score":0.6910743713378906},{"id":"https://openalex.org/keywords/generator","display_name":"Generator (circuit theory)","score":0.5953942537307739},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.5736912488937378},{"id":"https://openalex.org/keywords/query-optimization","display_name":"Query optimization","score":0.50660240650177},{"id":"https://openalex.org/keywords/query-language","display_name":"Query language","score":0.5018742084503174},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.41556552052497864},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.40379735827445984},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.34451043605804443}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.801950991153717},{"id":"https://openalex.org/C510870499","wikidata":"https://www.wikidata.org/wiki/Q47607","display_name":"SQL","level":2,"score":0.6910743713378906},{"id":"https://openalex.org/C2780992000","wikidata":"https://www.wikidata.org/wiki/Q17016113","display_name":"Generator (circuit theory)","level":3,"score":0.5953942537307739},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.5736912488937378},{"id":"https://openalex.org/C157692150","wikidata":"https://www.wikidata.org/wiki/Q2919848","display_name":"Query optimization","level":2,"score":0.50660240650177},{"id":"https://openalex.org/C192028432","wikidata":"https://www.wikidata.org/wiki/Q845739","display_name":"Query language","level":2,"score":0.5018742084503174},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.41556552052497864},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.40379735827445984},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.34451043605804443},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C163258240","wikidata":"https://www.wikidata.org/wiki/Q25342","display_name":"Power (physics)","level":2,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/jbhi.2013.2292591","is_oa":false,"landing_page_url":"https://doi.org/10.1109/jbhi.2013.2292591","pdf_url":null,"source":{"id":"https://openalex.org/S2495854775","display_name":"IEEE Journal of Biomedical and Health Informatics","issn_l":"2168-2194","issn":["2168-2194","2168-2208"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Journal of Biomedical and Health Informatics","raw_type":"journal-article"},{"id":"pmh:oai:pubmedcentral.nih.gov:4386600","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4386600","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE J Biomed Health Inform","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:4386600","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4386600","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE J Biomed Health Inform","raw_type":"Text"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/10","display_name":"Reduced inequalities","score":0.6600000262260437}],"awards":[{"id":"https://openalex.org/G1334568959","display_name":null,"funder_award_id":"D1BRH20410","funder_id":"https://openalex.org/F4320332175","funder_display_name":"Health Resources and Services Administration"},{"id":"https://openalex.org/G6095080147","display_name":null,"funder_award_id":"UL1TR000117","funder_id":"https://openalex.org/F4320337472","funder_display_name":"National Center for Advancing Translational Sciences"},{"id":"https://openalex.org/G8675677006","display_name":null,"funder_award_id":"UL1RR033173","funder_id":"https://openalex.org/F4320337375","funder_display_name":"National Center for Research Resources"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332175","display_name":"Health Resources and Services Administration","ror":"https://ror.org/033jnv181"},{"id":"https://openalex.org/F4320337375","display_name":"National Center for Research Resources","ror":"https://ror.org/04pw6fb54"},{"id":"https://openalex.org/F4320337472","display_name":"National Center for Advancing Translational Sciences","ror":"https://ror.org/04pw6fb54"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W24177566","https://openalex.org/W54739280","https://openalex.org/W202860122","https://openalex.org/W206869721","https://openalex.org/W1512404644","https://openalex.org/W1594279064","https://openalex.org/W1993313961","https://openalex.org/W2082872584","https://openalex.org/W2091372246","https://openalex.org/W2104608657","https://openalex.org/W2123712309","https://openalex.org/W2125987009","https://openalex.org/W2160779395","https://openalex.org/W2238133742","https://openalex.org/W2262089314","https://openalex.org/W2337792615","https://openalex.org/W6602226808","https://openalex.org/W6630546887","https://openalex.org/W6678642432","https://openalex.org/W6692625439"],"related_works":["https://openalex.org/W2556786504","https://openalex.org/W2152149667","https://openalex.org/W4244527061","https://openalex.org/W2469357693","https://openalex.org/W3125756434","https://openalex.org/W1977383094","https://openalex.org/W2572349046","https://openalex.org/W1779612025","https://openalex.org/W2413368787","https://openalex.org/W1515213763"],"abstract_inverted_index":{"We":[0,38,116],"present":[1],"a":[2,151,181,203],"custom,":[3],"Boolean":[4,23,120],"query":[5,59,77,147,159],"generator":[6,20,44,71,78,148],"utilizing":[7],"common-table":[8],"expressions":[9],"(CTEs)":[10],"that":[11,63],"is":[12,65],"capable":[13,66],"of":[14,42,67,86,94,205],"scaling":[15],"with":[16,187],"big":[17],"datasets.":[18],"The":[19,140,196],"maps":[21],"user-defined":[22],"queries,":[24],"such":[25],"as":[26],"those":[27],"interactively":[28],"created":[29],"in":[30,112],"clinical-research":[31],"and":[32,55,61,73,107,149],"general-purpose":[33],"healthcare":[34],"tools,":[35],"into":[36,49],"SQL.":[37],"demonstrate":[39],"the":[40,50,56,75,81,113,127,145],"effectiveness":[41],"this":[43,201],"by":[45,99,132,137],"integrating":[46],"our":[47,89],"study":[48],"Informatics":[51],"for":[52,200],"Integrating":[53],"Biology":[54],"Bedside":[57],"(i2b2)":[58],"tool":[60],"show":[62],"it":[64],"scaling.":[68],"Our":[69],"custom":[70],"replaces":[72],"outperforms":[74],"default":[76,146],"found":[79],"within":[80],"Clinical":[82],"Research":[83],"Chart":[84],"cell":[85],"i2b2.":[87],"In":[88],"experiments,":[90],"16":[91,125],"different":[92],"types":[93,160],"i2b2":[95],"queries":[96,121,130],"were":[97,135],"identified":[98],"varying":[100],"four":[101],"constraints:":[102],"date,":[103],"frequency,":[104],"exclusion":[105],"criteria,":[106],"whether":[108],"selected":[109],"concepts":[110],"occurred":[111],"same":[114],"encounter.":[115],"generated":[117],"nontrivial,":[118],"random":[119],"based":[122,184],"on":[123,185,193],"these":[124],"types;":[126],"corresponding":[128],"SQL":[129],"produced":[131],"both":[133],"generators":[134],"compared":[136],"execution":[138],"times.":[139],"CTE-based":[141],"solution":[142,183],"significantly":[143],"outperformed":[144],"provided":[150],"much":[152],"more":[153],"consistent":[154],"response":[155],"time":[156],"across":[157],"all":[158],"(M":[161],"=":[162,165,169,172],"2.03,":[163],"SD":[164,171],"6.64":[166],"versus":[167],"M":[168],"75.82,":[170],"238.88":[173],"s).":[174],"Without":[175],"costly":[176],"hardware":[177],"upgrades,":[178],"we":[179],"provide":[180],"scalable":[182],"CTEs":[186],"very":[188],"promising":[189],"empirical":[190],"results":[191],"centered":[192],"performance":[194],"gains.":[195],"evaluation":[197],"methodology":[198],"used":[199],"provides":[202],"means":[204],"profiling":[206],"clinical":[207],"data":[208],"warehouse":[209],"performance.":[210]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":5}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2016-06-24T00:00:00"}
