{"id":"https://openalex.org/W7147649151","doi":"https://doi.org/10.1109/iwsda67899.2025.11457431","title":"Clustering-Free and Clustering-Based Outer Channel Modeling and Decoding for DNA Storage","display_name":"Clustering-Free and Clustering-Based Outer Channel Modeling and Decoding for DNA Storage","publication_year":2025,"publication_date":"2025-12-07","ids":{"openalex":"https://openalex.org/W7147649151","doi":"https://doi.org/10.1109/iwsda67899.2025.11457431"},"language":null,"primary_location":{"id":"doi:10.1109/iwsda67899.2025.11457431","is_oa":false,"landing_page_url":"https://doi.org/10.1109/iwsda67899.2025.11457431","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2025 11th International Workshop on Signal Design and Its Applications in Communications (IWSDA)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5132551512","display_name":"Zhijun Yuan","orcid":null},"institutions":[{"id":"https://openalex.org/I4800084","display_name":"Southwest Jiaotong University","ror":"https://ror.org/00hn7w693","country_code":"CN","type":"education","lineage":["https://openalex.org/I4800084"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhijun Yuan","raw_affiliation_strings":["School of Mathematics, Southwest Jiaotong University,China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Mathematics, Southwest Jiaotong University,China","institution_ids":["https://openalex.org/I4800084"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101953034","display_name":"Yi Ding","orcid":"https://orcid.org/0000-0001-5656-8410"},"institutions":[{"id":"https://openalex.org/I4800084","display_name":"Southwest Jiaotong University","ror":"https://ror.org/00hn7w693","country_code":"CN","type":"education","lineage":["https://openalex.org/I4800084"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yi Ding","raw_affiliation_strings":["Southwest Jiaotong University,Information Coding and Transmission Key Lab of Sichuan Province,China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Southwest Jiaotong University,Information Coding and Transmission Key Lab of Sichuan Province,China","institution_ids":["https://openalex.org/I4800084"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062225577","display_name":"Xuan He","orcid":"https://orcid.org/0000-0002-8934-1981"},"institutions":[{"id":"https://openalex.org/I4800084","display_name":"Southwest Jiaotong University","ror":"https://ror.org/00hn7w693","country_code":"CN","type":"education","lineage":["https://openalex.org/I4800084"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xuan He","raw_affiliation_strings":["Southwest Jiaotong University,Information Coding and Transmission Key Lab of Sichuan Province,China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Southwest Jiaotong University,Information Coding and Transmission Key Lab of Sichuan Province,China","institution_ids":["https://openalex.org/I4800084"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5086776927","display_name":"Xiaohu Tang","orcid":"https://orcid.org/0009-0008-9305-1945"},"institutions":[{"id":"https://openalex.org/I4800084","display_name":"Southwest Jiaotong University","ror":"https://ror.org/00hn7w693","country_code":"CN","type":"education","lineage":["https://openalex.org/I4800084"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaohu Tang","raw_affiliation_strings":["Southwest Jiaotong University,Information Coding and Transmission Key Lab of Sichuan Province,China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Southwest Jiaotong University,Information Coding and Transmission Key Lab of Sichuan Province,China","institution_ids":["https://openalex.org/I4800084"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I4800084"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"5"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9907000064849854,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9907000064849854,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.002300000051036477,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10432","display_name":"DNA and Nucleic Acid Chemistry","score":0.0017999999690800905,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/decoding-methods","display_name":"Decoding methods","score":0.8287000060081482},{"id":"https://openalex.org/keywords/erasure","display_name":"Erasure","score":0.6632999777793884},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.6316999793052673},{"id":"https://openalex.org/keywords/channel","display_name":"Channel (broadcasting)","score":0.5482000112533569},{"id":"https://openalex.org/keywords/encoding","display_name":"Encoding (memory)","score":0.49720001220703125},{"id":"https://openalex.org/keywords/sequential-decoding","display_name":"Sequential decoding","score":0.4253999888896942},{"id":"https://openalex.org/keywords/list-decoding","display_name":"List decoding","score":0.4221999943256378}],"concepts":[{"id":"https://openalex.org/C57273362","wikidata":"https://www.wikidata.org/wiki/Q576722","display_name":"Decoding methods","level":2,"score":0.8287000060081482},{"id":"https://openalex.org/C2778790127","wikidata":"https://www.wikidata.org/wiki/Q484885","display_name":"Erasure","level":2,"score":0.6632999777793884},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.6316999793052673},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6110000014305115},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5974000096321106},{"id":"https://openalex.org/C127162648","wikidata":"https://www.wikidata.org/wiki/Q16858953","display_name":"Channel (broadcasting)","level":2,"score":0.5482000112533569},{"id":"https://openalex.org/C125411270","wikidata":"https://www.wikidata.org/wiki/Q18653","display_name":"Encoding (memory)","level":2,"score":0.49720001220703125},{"id":"https://openalex.org/C193969084","wikidata":"https://www.wikidata.org/wiki/Q7452500","display_name":"Sequential decoding","level":4,"score":0.4253999888896942},{"id":"https://openalex.org/C204397858","wikidata":"https://www.wikidata.org/wiki/Q4437907","display_name":"List decoding","level":5,"score":0.4221999943256378},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.359499990940094},{"id":"https://openalex.org/C77618280","wikidata":"https://www.wikidata.org/wiki/Q1155772","display_name":"Scheme (mathematics)","level":2,"score":0.3578999936580658},{"id":"https://openalex.org/C2778220771","wikidata":"https://www.wikidata.org/wiki/Q1522579","display_name":"Substitution (logic)","level":2,"score":0.3301999866962433},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.32839998602867126},{"id":"https://openalex.org/C103088060","wikidata":"https://www.wikidata.org/wiki/Q1062839","display_name":"Error detection and correction","level":2,"score":0.30140000581741333},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.29910001158714294},{"id":"https://openalex.org/C78944582","wikidata":"https://www.wikidata.org/wiki/Q5158264","display_name":"Concatenated error correction code","level":4,"score":0.2906999886035919},{"id":"https://openalex.org/C194739806","wikidata":"https://www.wikidata.org/wiki/Q66221","display_name":"Computer data storage","level":2,"score":0.2782000005245209},{"id":"https://openalex.org/C149862233","wikidata":"https://www.wikidata.org/wiki/Q864142","display_name":"Binary erasure channel","level":4,"score":0.26600000262260437}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/iwsda67899.2025.11457431","is_oa":false,"landing_page_url":"https://doi.org/10.1109/iwsda67899.2025.11457431","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2025 11th International Workshop on Signal Design and Its Applications in Communications (IWSDA)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G8499607429","display_name":null,"funder_award_id":"62331002,62371401,62571455","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":9,"referenced_works":["https://openalex.org/W2083774980","https://openalex.org/W2162442687","https://openalex.org/W2170484108","https://openalex.org/W2592122940","https://openalex.org/W2788257106","https://openalex.org/W3210767789","https://openalex.org/W4312913082","https://openalex.org/W4319990601","https://openalex.org/W4386353029"],"related_works":[],"abstract_inverted_index":{"In":[0],"this":[1],"paper,":[2],"to":[3],"simplify":[4],"the":[5,42,60,83,87,103],"investigation":[6],"of":[7,97],"outer":[8,25,85],"codes":[9],"in":[10],"DNA":[11],"storage":[12],"systems,":[13],"we":[14],"propose":[15],"two":[16],"equivalent":[17],"channel":[18,26],"models,":[19,40],"respectively":[20],"called":[21],"clustering-free":[22,84],"and":[23,53],"clustering-based":[24],"models":[27],"as":[28],"they":[29],"mainly":[30],"differ":[31],"at":[32],"whether":[33],"considering":[34],"clustering":[35],"for":[36,41,71,77],"inner":[37],"decoding.":[38],"Both":[39],"first":[43],"time,":[44],"feature":[45],"four":[46],"characterizations:":[47],"disorder,":[48],"multi-copy,":[49],"strand-level":[50],"erasure":[51],"errors,":[52],"burst":[54],"bit":[55],"substitution":[56],"errors.":[57],"We":[58],"improve":[59],"decoding":[61,80,100],"performance":[62,101],"by":[63],"proposing":[64],"a":[65,78],"universal":[66],"hard":[67,89],"information":[68,90],"computation":[69,91],"scheme":[70,92],"both":[72],"models.":[73],"Simulations":[74],"show":[75],"that,":[76],"given":[79],"algorithm":[81],"under":[82],"channel,":[86],"proposed":[88],"can":[93],"have":[94],"4":[95],"orders":[96],"magnitude":[98],"better":[99],"than":[102],"state-of-the-art":[104],"scheme.":[105]},"counts_by_year":[],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2026-04-02T00:00:00"}