{"id":"https://openalex.org/W2593866924","doi":"https://doi.org/10.1109/iwbis.2016.7872901","title":"Parallel rules based classifier using DNA strand displacement for multiple molecular markers detection","display_name":"Parallel rules based classifier using DNA strand displacement for multiple molecular markers detection","publication_year":2016,"publication_date":"2016-10-01","ids":{"openalex":"https://openalex.org/W2593866924","doi":"https://doi.org/10.1109/iwbis.2016.7872901","mag":"2593866924"},"language":"en","primary_location":{"id":"doi:10.1109/iwbis.2016.7872901","is_oa":false,"landing_page_url":"https://doi.org/10.1109/iwbis.2016.7872901","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2016 International Workshop on Big Data and Information Security (IWBIS)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017597192","display_name":"Adi Wibowo","orcid":"https://orcid.org/0000-0002-7966-1017"},"institutions":[{"id":"https://openalex.org/I11855966","display_name":"Diponegoro University","ror":"https://ror.org/056bjta22","country_code":"ID","type":"education","lineage":["https://openalex.org/I11855966"]}],"countries":["ID"],"is_corresponding":true,"raw_author_name":"Adi Wibowo","raw_affiliation_strings":["Department of Informatics, Diponegoro University, Tembalang, Semarang, Indonesia"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, Diponegoro University, Tembalang, Semarang, Indonesia","institution_ids":["https://openalex.org/I11855966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006941749","display_name":"Satriyo Adhy","orcid":"https://orcid.org/0000-0001-7520-9923"},"institutions":[{"id":"https://openalex.org/I11855966","display_name":"Diponegoro University","ror":"https://ror.org/056bjta22","country_code":"ID","type":"education","lineage":["https://openalex.org/I11855966"]}],"countries":["ID"],"is_corresponding":false,"raw_author_name":"Satriyo Adhy","raw_affiliation_strings":["Department of Informatics, Diponegoro University, Tembalang, Semarang, Indonesia"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, Diponegoro University, Tembalang, Semarang, Indonesia","institution_ids":["https://openalex.org/I11855966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052086604","display_name":"Retno Kusumaningrum","orcid":"https://orcid.org/0000-0002-3606-436X"},"institutions":[{"id":"https://openalex.org/I11855966","display_name":"Diponegoro University","ror":"https://ror.org/056bjta22","country_code":"ID","type":"education","lineage":["https://openalex.org/I11855966"]}],"countries":["ID"],"is_corresponding":false,"raw_author_name":"Retno Kusumaningrum","raw_affiliation_strings":["Department of Informatics, Diponegoro University, Tembalang, Semarang, Indonesia"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, Diponegoro University, Tembalang, Semarang, Indonesia","institution_ids":["https://openalex.org/I11855966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024858986","display_name":"Helmie Arif Wibawa","orcid":"https://orcid.org/0000-0003-1263-373X"},"institutions":[{"id":"https://openalex.org/I11855966","display_name":"Diponegoro University","ror":"https://ror.org/056bjta22","country_code":"ID","type":"education","lineage":["https://openalex.org/I11855966"]}],"countries":["ID"],"is_corresponding":false,"raw_author_name":"Helmie Arif Wibawa","raw_affiliation_strings":["Department of Informatics, Diponegoro University, Tembalang, Semarang, Indonesia"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, Diponegoro University, Tembalang, Semarang, Indonesia","institution_ids":["https://openalex.org/I11855966"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5111494045","display_name":"Kosuke Sekiyama","orcid":null},"institutions":[{"id":"https://openalex.org/I60134161","display_name":"Nagoya University","ror":"https://ror.org/04chrp450","country_code":"JP","type":"education","lineage":["https://openalex.org/I60134161"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kosuke Sekiyama","raw_affiliation_strings":["Dept. of Micro-Nano System Engineering, Nagoya University Furo-cho, Chikusa-ku, Nagoya-shi, Japan"],"affiliations":[{"raw_affiliation_string":"Dept. of Micro-Nano System Engineering, Nagoya University Furo-cho, Chikusa-ku, Nagoya-shi, Japan","institution_ids":["https://openalex.org/I60134161"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5017597192"],"corresponding_institution_ids":["https://openalex.org/I11855966"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.12022355,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"318","issue":null,"first_page":"127","last_page":"132"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10432","display_name":"DNA and Nucleic Acid Chemistry","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6002299785614014},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.5834764242172241},{"id":"https://openalex.org/keywords/nucleic-acid","display_name":"Nucleic acid","score":0.565462052822113},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.5150511264801025},{"id":"https://openalex.org/keywords/massively-parallel","display_name":"Massively parallel","score":0.4704902172088623},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3781850039958954},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.33670496940612793},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3346206545829773},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2403818666934967},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.19922643899917603},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.14363649487495422}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6002299785614014},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.5834764242172241},{"id":"https://openalex.org/C24107716","wikidata":"https://www.wikidata.org/wiki/Q123619","display_name":"Nucleic acid","level":2,"score":0.565462052822113},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.5150511264801025},{"id":"https://openalex.org/C190475519","wikidata":"https://www.wikidata.org/wiki/Q544384","display_name":"Massively parallel","level":2,"score":0.4704902172088623},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3781850039958954},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.33670496940612793},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3346206545829773},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2403818666934967},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.19922643899917603},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.14363649487495422}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/iwbis.2016.7872901","is_oa":false,"landing_page_url":"https://doi.org/10.1109/iwbis.2016.7872901","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2016 International Workshop on Big Data and Information Security (IWBIS)","raw_type":"proceedings-article"},{"id":"mag:2899477931","is_oa":false,"landing_page_url":"http://jglobal.jst.go.jp/en/public/20090422/201702219172029117","pdf_url":null,"source":{"id":"https://openalex.org/S4306512817","display_name":"IEEE Conference Proceedings","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":"IEEE Conference Proceedings","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.44999998807907104,"id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W1617520624","https://openalex.org/W1964928696","https://openalex.org/W1986292487","https://openalex.org/W2014946489","https://openalex.org/W2050630660","https://openalex.org/W2052276476","https://openalex.org/W2074815060","https://openalex.org/W2075031385","https://openalex.org/W2104039374","https://openalex.org/W2134229491","https://openalex.org/W2150210646","https://openalex.org/W2171697766","https://openalex.org/W2186876778","https://openalex.org/W2292799467","https://openalex.org/W2397101815","https://openalex.org/W2769858841"],"related_works":["https://openalex.org/W1971444612","https://openalex.org/W1543504406","https://openalex.org/W633173308","https://openalex.org/W2383750441","https://openalex.org/W1572021523","https://openalex.org/W2802691951","https://openalex.org/W2061946247","https://openalex.org/W2135990064","https://openalex.org/W17472890","https://openalex.org/W2049864679"],"abstract_inverted_index":{"The":[0],"detection":[1,40,45,144],"of":[2,20,29,78,86,92],"molecular":[3,30,39,81,142],"markers":[4,31,143],"such":[5],"as":[6,42,76,133],"micro":[7],"ribonucleic":[8],"acid":[9],"(miRNA)":[10],"expression":[11],"levels":[12],"in":[13,99],"the":[14,93,109,113,118,124,138],"cells":[15],"are":[16],"essential":[17],"for":[18,117,137],"diagnosis":[19],"a":[21,26],"disease,":[22],"especially":[23],"cancer.":[24],"Recently,":[25],"huge":[27],"amount":[28],"on":[32,123],"cell":[33],"is":[34,49,131],"being":[35],"extracted":[36],"by":[37],"single":[38],"method,":[41],"results,":[43],"excessively":[44],"process":[46],"and":[47,62,89,112,145],"time":[48],"required.":[50],"Meanwhile":[51],"DNA":[52,72,84],"computing":[53],"has":[54],"capabilities":[55],"to":[56],"interact":[57],"with":[58],"biological":[59],"nucleic":[60],"acids":[61],"massively":[63],"parallel":[64,68,87],"processing,":[65],"we":[66,106],"propose":[67],"rule-based":[69],"classifier":[70],"using":[71],"strand":[73],"displacement":[74],"reaction":[75,85],"method":[77,111,116,130],"detecting":[79],"multiple":[80],"markers.":[82],"Two":[83],"sensing":[88],"encoding":[90],"system":[91],"IF-THEN":[94],"rules":[95],"have":[96],"been":[97],"developed":[98],"our":[100,129],"proposed":[101,110],"model.":[102],"In":[103],"this":[104],"paper,":[105],"compared":[107],"between":[108],"AND":[114],"gate":[115],"classification":[119],"result.":[120],"Moreover,":[121],"based":[122],"simulation":[125],"results":[126],"show":[127],"that":[128],"possible":[132],"an":[134],"alternative":[135],"solution":[136],"programmable":[139],"fast":[140],"big":[141],"diagnosis.":[146]},"counts_by_year":[{"year":2022,"cited_by_count":1}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
