{"id":"https://openalex.org/W4382365161","doi":"https://doi.org/10.1109/itw55543.2023.10161631","title":"Index-Based Concatenated Codes for the Multi-Draw DNA Storage Channel","display_name":"Index-Based Concatenated Codes for the Multi-Draw DNA Storage Channel","publication_year":2023,"publication_date":"2023-04-23","ids":{"openalex":"https://openalex.org/W4382365161","doi":"https://doi.org/10.1109/itw55543.2023.10161631"},"language":"en","primary_location":{"id":"doi:10.1109/itw55543.2023.10161631","is_oa":false,"landing_page_url":"https://doi.org/10.1109/itw55543.2023.10161631","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 IEEE Information Theory Workshop (ITW)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5034799688","display_name":"Lorenz Welter","orcid":"https://orcid.org/0000-0002-5135-6731"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Lorenz Welter","raw_affiliation_strings":["Technical University of Munich,School of Computation, Information and Technology,Munich,Germany,DE-80333"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Technical University of Munich,School of Computation, Information and Technology,Munich,Germany,DE-80333","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068655947","display_name":"Issam Maarouf","orcid":"https://orcid.org/0000-0003-4791-4515"},"institutions":[{"id":"https://openalex.org/I2799829267","display_name":"Simula Research Laboratory","ror":"https://ror.org/00vn06n10","country_code":"NO","type":"facility","lineage":["https://openalex.org/I2799829267"]},{"id":"https://openalex.org/I4387153661","display_name":"Simula UiB","ror":"https://ror.org/05kmggt55","country_code":null,"type":"nonprofit","lineage":["https://openalex.org/I2799829267","https://openalex.org/I4387153661","https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Issam Maarouf","raw_affiliation_strings":["Simula UiB,Bergen,Norway,N-5006"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Simula UiB,Bergen,Norway,N-5006","institution_ids":["https://openalex.org/I2799829267","https://openalex.org/I4387153661"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049949510","display_name":"Andreas Lenz","orcid":"https://orcid.org/0000-0002-0310-7706"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Andreas Lenz","raw_affiliation_strings":["Technical University of Munich,School of Computation, Information and Technology,Munich,Germany,DE-80333"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Technical University of Munich,School of Computation, Information and Technology,Munich,Germany,DE-80333","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041962883","display_name":"Antonia Wachter-Zeh","orcid":"https://orcid.org/0000-0002-5174-1947"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Antonia Wachter-Zeh","raw_affiliation_strings":["Technical University of Munich,School of Computation, Information and Technology,Munich,Germany,DE-80333"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Technical University of Munich,School of Computation, Information and Technology,Munich,Germany,DE-80333","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090738616","display_name":"Eirik Rosnes","orcid":"https://orcid.org/0000-0001-8236-6601"},"institutions":[{"id":"https://openalex.org/I2799829267","display_name":"Simula Research Laboratory","ror":"https://ror.org/00vn06n10","country_code":"NO","type":"facility","lineage":["https://openalex.org/I2799829267"]},{"id":"https://openalex.org/I4387153661","display_name":"Simula UiB","ror":"https://ror.org/05kmggt55","country_code":null,"type":"nonprofit","lineage":["https://openalex.org/I2799829267","https://openalex.org/I4387153661","https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Eirik Rosnes","raw_affiliation_strings":["Simula UiB,Bergen,Norway,N-5006"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Simula UiB,Bergen,Norway,N-5006","institution_ids":["https://openalex.org/I2799829267","https://openalex.org/I4387153661"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5014522913","display_name":"Alexandre Graell i Amat","orcid":"https://orcid.org/0000-0002-5725-869X"},"institutions":[{"id":"https://openalex.org/I66862912","display_name":"Chalmers University of Technology","ror":"https://ror.org/040wg7k59","country_code":"SE","type":"education","lineage":["https://openalex.org/I66862912"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Alexandre Graell I Amat","raw_affiliation_strings":["Chalmers University of Technology,Department of Electrical Engineering,Gothenburg,Sweden,SE-41296"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chalmers University of Technology,Department of Electrical Engineering,Gothenburg,Sweden,SE-41296","institution_ids":["https://openalex.org/I66862912"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.1412,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.78304827,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"383","last_page":"388"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12162","display_name":"Cellular Automata and Applications","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6918337345123291},{"id":"https://openalex.org/keywords/concatenated-error-correction-code","display_name":"Concatenated error correction code","score":0.6544128656387329},{"id":"https://openalex.org/keywords/concatenation","display_name":"Concatenation (mathematics)","score":0.6281071305274963},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.6122965216636658},{"id":"https://openalex.org/keywords/decoding-methods","display_name":"Decoding methods","score":0.47349199652671814},{"id":"https://openalex.org/keywords/error-detection-and-correction","display_name":"Error detection and correction","score":0.46234574913978577},{"id":"https://openalex.org/keywords/channel","display_name":"Channel (broadcasting)","score":0.4603085517883301},{"id":"https://openalex.org/keywords/coding","display_name":"Coding (social sciences)","score":0.4293849766254425},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.4275173842906952},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.21600764989852905},{"id":"https://openalex.org/keywords/block-code","display_name":"Block code","score":0.14189282059669495},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.14149069786071777},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.09939432144165039},{"id":"https://openalex.org/keywords/arithmetic","display_name":"Arithmetic","score":0.06820645928382874}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6918337345123291},{"id":"https://openalex.org/C78944582","wikidata":"https://www.wikidata.org/wiki/Q5158264","display_name":"Concatenated error correction code","level":4,"score":0.6544128656387329},{"id":"https://openalex.org/C87619178","wikidata":"https://www.wikidata.org/wiki/Q126002","display_name":"Concatenation (mathematics)","level":2,"score":0.6281071305274963},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.6122965216636658},{"id":"https://openalex.org/C57273362","wikidata":"https://www.wikidata.org/wiki/Q576722","display_name":"Decoding methods","level":2,"score":0.47349199652671814},{"id":"https://openalex.org/C103088060","wikidata":"https://www.wikidata.org/wiki/Q1062839","display_name":"Error detection and correction","level":2,"score":0.46234574913978577},{"id":"https://openalex.org/C127162648","wikidata":"https://www.wikidata.org/wiki/Q16858953","display_name":"Channel (broadcasting)","level":2,"score":0.4603085517883301},{"id":"https://openalex.org/C179518139","wikidata":"https://www.wikidata.org/wiki/Q5140297","display_name":"Coding (social sciences)","level":2,"score":0.4293849766254425},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.4275173842906952},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.21600764989852905},{"id":"https://openalex.org/C157125643","wikidata":"https://www.wikidata.org/wiki/Q884707","display_name":"Block code","level":3,"score":0.14189282059669495},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.14149069786071777},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.09939432144165039},{"id":"https://openalex.org/C94375191","wikidata":"https://www.wikidata.org/wiki/Q11205","display_name":"Arithmetic","level":1,"score":0.06820645928382874},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/itw55543.2023.10161631","is_oa":false,"landing_page_url":"https://doi.org/10.1109/itw55543.2023.10161631","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 IEEE Information Theory Workshop (ITW)","raw_type":"proceedings-article"},{"id":"pmh:oai:mediatum.ub.tum.de:node/1720255","is_oa":false,"landing_page_url":"https://mediatum.ub.tum.de/1720255","pdf_url":null,"source":{"id":"https://openalex.org/S4377196330","display_name":"mediaTUM  (Technical University of Munich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I62916508","host_organization_name":"Technical University of Munich","host_organization_lineage":["https://openalex.org/I62916508"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"ConferencePaper"},{"id":"pmh:oai:research.chalmers.se:536759","is_oa":false,"landing_page_url":"https://research.chalmers.se/en/publication/536759","pdf_url":null,"source":{"id":"https://openalex.org/S4306402469","display_name":"Chalmers Research (Chalmers University of Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I66862912","host_organization_name":"Chalmers University of Technology","host_organization_lineage":["https://openalex.org/I66862912"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":33,"referenced_works":["https://openalex.org/W1946587648","https://openalex.org/W1968626661","https://openalex.org/W1981526911","https://openalex.org/W1991528082","https://openalex.org/W2010838795","https://openalex.org/W2025383314","https://openalex.org/W2055620998","https://openalex.org/W2061475625","https://openalex.org/W2114487425","https://openalex.org/W2123119950","https://openalex.org/W2139490030","https://openalex.org/W2145570573","https://openalex.org/W2151961505","https://openalex.org/W2162980030","https://openalex.org/W2167082268","https://openalex.org/W2615068531","https://openalex.org/W2753923014","https://openalex.org/W2788257106","https://openalex.org/W2936307398","https://openalex.org/W2962809499","https://openalex.org/W3006411219","https://openalex.org/W3015739952","https://openalex.org/W3093968171","https://openalex.org/W3128859846","https://openalex.org/W3190296759","https://openalex.org/W3216171223","https://openalex.org/W4213456065","https://openalex.org/W4285146809","https://openalex.org/W4285181352","https://openalex.org/W4287802997","https://openalex.org/W6640626097","https://openalex.org/W6744141380","https://openalex.org/W6776682468"],"related_works":["https://openalex.org/W2900120528","https://openalex.org/W2783895911","https://openalex.org/W2795193539","https://openalex.org/W2034401304","https://openalex.org/W4245458608","https://openalex.org/W2273978823","https://openalex.org/W2315999626","https://openalex.org/W2806663979","https://openalex.org/W2157771100","https://openalex.org/W2153501912"],"abstract_inverted_index":{"We":[0,7,62,92,118],"consider":[1],"error-correcting":[2],"coding":[3,67],"for":[4,114,123,131],"DNA-based":[5],"storage.":[6],"model":[8],"the":[9,19,38,71,86,115,124],"DNA":[10,27,47,51],"storage":[11],"channel":[12,17,39],"as":[13],"a":[14,32,41,95,101,111],"multi-draw":[15],"IDS":[16,90],"where":[18,85],"input":[20],"data":[21],"is":[22],"chunked":[23],"into":[24],"M":[25],"short":[26],"strands,":[28],"which":[29],"are":[30,53],"copied":[31],"random":[33,42],"number":[34],"of":[35,44,70,73],"times,":[36],"and":[37,58,80,127,134,140],"outputs":[40],"selection":[43],"N":[45],"noisy":[46],"strands.":[48],"The":[49],"retrieved":[50],"strands":[52],"prone":[54],"to":[55,108],"insertion,":[56],"deletion,":[57],"substitution":[59],"(IDS)":[60],"errors.":[61,91],"propose":[63,94],"an":[64,74,77,81],"index-based":[65],"concatenated":[66],"scheme":[68],"consisting":[69],"concatenation":[72],"outer":[75,116,125],"code,":[76,79,84],"index":[78],"inner":[82],"synchronization":[83],"latter":[87],"two":[88],"tackle":[89],"further":[93],"mismatched":[96],"joint":[97],"index-synchronization":[98],"code":[99,126],"maximum":[100],"posteriori":[102,112],"probability":[103],"decoder":[104],"with":[105],"optional":[106],"clustering":[107],"infer":[109],"symbolwise":[110],"probabilities":[113,133],"decoder.":[117],"compute":[119],"achievable":[120],"information":[121],"rates":[122,137],"present":[128],"Monte-Carlo":[129],"simulations":[130],"information-outage":[132],"frame":[135],"error":[136],"on":[138],"synthetic":[139],"experimental":[141],"data,":[142],"respectively.":[143]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
