{"id":"https://openalex.org/W2166520171","doi":"https://doi.org/10.1109/itcc.2004.1286595","title":"Integrating ontology and workflow in PROTEUS, a grid-based problem solving environment for bioinformatics","display_name":"Integrating ontology and workflow in PROTEUS, a grid-based problem solving environment for bioinformatics","publication_year":2004,"publication_date":"2004-01-01","ids":{"openalex":"https://openalex.org/W2166520171","doi":"https://doi.org/10.1109/itcc.2004.1286595","mag":"2166520171"},"language":"en","primary_location":{"id":"doi:10.1109/itcc.2004.1286595","is_oa":false,"landing_page_url":"https://doi.org/10.1109/itcc.2004.1286595","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Conference on Information Technology: Coding and Computing, 2004. Proceedings. ITCC 2004.","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5004845138","display_name":"Mario Cannataro","orcid":"https://orcid.org/0000-0003-1502-2387"},"institutions":[{"id":"https://openalex.org/I36443711","display_name":"Magna Graecia University","ror":"https://ror.org/0530bdk91","country_code":"IT","type":"education","lineage":["https://openalex.org/I36443711"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"M. Cannataro","raw_affiliation_strings":["University of Catanzaro, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Catanzaro, Italy","institution_ids":["https://openalex.org/I36443711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077504436","display_name":"Carmela Comito","orcid":"https://orcid.org/0000-0001-9116-4323"},"institutions":[{"id":"https://openalex.org/I45204951","display_name":"University of Calabria","ror":"https://ror.org/02rc97e94","country_code":"IT","type":"education","lineage":["https://openalex.org/I45204951"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"C. Comito","raw_affiliation_strings":["University of Calabria, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Calabria, Italy","institution_ids":["https://openalex.org/I45204951"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011937230","display_name":"Antonella Guzzo","orcid":"https://orcid.org/0000-0003-3159-0536"},"institutions":[{"id":"https://openalex.org/I45204951","display_name":"University of Calabria","ror":"https://ror.org/02rc97e94","country_code":"IT","type":"education","lineage":["https://openalex.org/I45204951"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"A. Guzzo","raw_affiliation_strings":["University of Calabria, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Calabria, Italy","institution_ids":["https://openalex.org/I45204951"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5027369094","display_name":"Pierangelo Veltri","orcid":"https://orcid.org/0000-0003-2494-0294"},"institutions":[{"id":"https://openalex.org/I36443711","display_name":"Magna Graecia University","ror":"https://ror.org/0530bdk91","country_code":"IT","type":"education","lineage":["https://openalex.org/I36443711"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"P. Veltri","raw_affiliation_strings":["University of Catanzaro, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Catanzaro, Italy","institution_ids":["https://openalex.org/I36443711"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":22,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":"2003","issue":null,"first_page":"90","last_page":"94 Vol.2"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9668999910354614,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.8391083478927612},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7879390120506287},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.6683912873268127},{"id":"https://openalex.org/keywords/workflow-management-system","display_name":"Workflow management system","score":0.5062434077262878},{"id":"https://openalex.org/keywords/grid","display_name":"Grid","score":0.4860706627368927},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.47591882944107056},{"id":"https://openalex.org/keywords/grid-computing","display_name":"Grid computing","score":0.46018606424331665},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.3899441659450531},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.33601993322372437},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.327564537525177}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.8391083478927612},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7879390120506287},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.6683912873268127},{"id":"https://openalex.org/C140824633","wikidata":"https://www.wikidata.org/wiki/Q2808660","display_name":"Workflow management system","level":3,"score":0.5062434077262878},{"id":"https://openalex.org/C187691185","wikidata":"https://www.wikidata.org/wiki/Q2020720","display_name":"Grid","level":2,"score":0.4860706627368927},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.47591882944107056},{"id":"https://openalex.org/C70429105","wikidata":"https://www.wikidata.org/wiki/Q249999","display_name":"Grid computing","level":3,"score":0.46018606424331665},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.3899441659450531},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.33601993322372437},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.327564537525177},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/itcc.2004.1286595","is_oa":false,"landing_page_url":"https://doi.org/10.1109/itcc.2004.1286595","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Conference on Information Technology: Coding and Computing, 2004. Proceedings. ITCC 2004.","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Responsible consumption and production","score":0.550000011920929,"id":"https://metadata.un.org/sdg/12"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320321873","display_name":"Ministero dell\u2019Istruzione, dell\u2019Universit\u00e0 e della Ricerca","ror":"https://ror.org/0166hxq48"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W12633767","https://openalex.org/W85417765","https://openalex.org/W144429095","https://openalex.org/W173647602","https://openalex.org/W1481408955","https://openalex.org/W1498183065","https://openalex.org/W2004407704","https://openalex.org/W2011560024","https://openalex.org/W2026480276","https://openalex.org/W2033801104","https://openalex.org/W2082991897","https://openalex.org/W2083209848","https://openalex.org/W2086590865","https://openalex.org/W2091122332","https://openalex.org/W2129383727","https://openalex.org/W2131146415","https://openalex.org/W2137079713","https://openalex.org/W2154010459","https://openalex.org/W4241707893","https://openalex.org/W4285719527","https://openalex.org/W6600500905","https://openalex.org/W6603405598","https://openalex.org/W6605930311"],"related_works":["https://openalex.org/W2375304607","https://openalex.org/W2391168633","https://openalex.org/W2035995658","https://openalex.org/W2353477037","https://openalex.org/W1574425962","https://openalex.org/W2385499106","https://openalex.org/W2354357087","https://openalex.org/W2352774566","https://openalex.org/W4243836028","https://openalex.org/W2376671203"],"abstract_inverted_index":{"Bioinformatics":[0,21],"is":[1],"as":[2],"a":[3,51],"bridge":[4],"between":[5],"life":[6],"science":[7],"and":[8,30,34,45,59,65],"computer":[9,11],"science:":[10],"algorithms":[12],"are":[13],"needed":[14],"to":[15,62],"face":[16],"complexity":[17],"of":[18,42,49,67],"biological":[19,25],"processes.":[20],"applications":[22,44,69],"manage":[23],"complex":[24],"data":[26],"stored":[27],"into":[28],"distributed":[29],"often":[31],"heterogeneous":[32],"databases":[33],"require":[35],"large":[36],"computing":[37],"power.":[38],"We":[39],"discuss":[40],"requirements":[41],"such":[43],"present":[46],"the":[47,71],"architecture":[48],"PROTEUS,":[50],"grid-based":[52],"problem":[53],"solving":[54],"environment":[55],"that":[56],"integrates":[57],"ontology":[58],"workflow":[60],"approaches":[61],"enhance":[63],"composition":[64],"execution":[66],"bioinformatics":[68],"on":[70],"grid.":[72]},"counts_by_year":[{"year":2016,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
