{"id":"https://openalex.org/W2078642355","doi":"https://doi.org/10.1109/istc.2014.6955104","title":"Investigation of genetic code optimality for overlapping protein coding sequences","display_name":"Investigation of genetic code optimality for overlapping protein coding sequences","publication_year":2014,"publication_date":"2014-08-01","ids":{"openalex":"https://openalex.org/W2078642355","doi":"https://doi.org/10.1109/istc.2014.6955104","mag":"2078642355"},"language":"en","primary_location":{"id":"doi:10.1109/istc.2014.6955104","is_oa":false,"landing_page_url":"https://doi.org/10.1109/istc.2014.6955104","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 8th International Symposium on Turbo Codes and Iterative Information Processing (ISTC)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5076628926","display_name":"Katharina Mir","orcid":null},"institutions":[{"id":"https://openalex.org/I196349391","display_name":"Universit\u00e4t Ulm","ror":"https://ror.org/032000t02","country_code":"DE","type":"education","lineage":["https://openalex.org/I196349391"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Katharina Mir","raw_affiliation_strings":["Institute of Communications Engineering, Ulm University, Ulm","Institute of Communications Engineering Ulm University Albert-Einstein-Allee 43 89081 Ulm"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Communications Engineering, Ulm University, Ulm","institution_ids":["https://openalex.org/I196349391"]},{"raw_affiliation_string":"Institute of Communications Engineering Ulm University Albert-Einstein-Allee 43 89081 Ulm","institution_ids":["https://openalex.org/I196349391"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5022350775","display_name":"Steffen Schober","orcid":null},"institutions":[{"id":"https://openalex.org/I196349391","display_name":"Universit\u00e4t Ulm","ror":"https://ror.org/032000t02","country_code":"DE","type":"education","lineage":["https://openalex.org/I196349391"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Steffen Schober","raw_affiliation_strings":["Institute of Communications Engineering, Ulm University, Ulm","Institute of Communications Engineering Ulm University Albert-Einstein-Allee 43 89081 Ulm"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Communications Engineering, Ulm University, Ulm","institution_ids":["https://openalex.org/I196349391"]},{"raw_affiliation_string":"Institute of Communications Engineering Ulm University Albert-Einstein-Allee 43 89081 Ulm","institution_ids":["https://openalex.org/I196349391"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.2847,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.60162753,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"152","last_page":"156"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10120","display_name":"Bacterial Genetics and Biotechnology","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9958999752998352,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/genetic-code","display_name":"Genetic code","score":0.7804358005523682},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.7139542698860168},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6744664907455444},{"id":"https://openalex.org/keywords/coding","display_name":"Coding (social sciences)","score":0.5945609211921692},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.5091854929924011},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.4646906852722168},{"id":"https://openalex.org/keywords/reading-frame","display_name":"Reading frame","score":0.447915643453598},{"id":"https://openalex.org/keywords/codon-usage-bias","display_name":"Codon usage bias","score":0.42488664388656616},{"id":"https://openalex.org/keywords/open-reading-frame","display_name":"Open reading frame","score":0.384715735912323},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.36632847785949707},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.33424049615859985},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3277113735675812},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3026522994041443},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.25765472650527954},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.18547677993774414},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1359574794769287},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.10547396540641785}],"concepts":[{"id":"https://openalex.org/C10853874","wikidata":"https://www.wikidata.org/wiki/Q180618","display_name":"Genetic code","level":3,"score":0.7804358005523682},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.7139542698860168},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6744664907455444},{"id":"https://openalex.org/C179518139","wikidata":"https://www.wikidata.org/wiki/Q5140297","display_name":"Coding (social sciences)","level":2,"score":0.5945609211921692},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.5091854929924011},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.4646906852722168},{"id":"https://openalex.org/C166253671","wikidata":"https://www.wikidata.org/wiki/Q923372","display_name":"Reading frame","level":5,"score":0.447915643453598},{"id":"https://openalex.org/C87253356","wikidata":"https://www.wikidata.org/wiki/Q1106472","display_name":"Codon usage bias","level":4,"score":0.42488664388656616},{"id":"https://openalex.org/C47289529","wikidata":"https://www.wikidata.org/wiki/Q908550","display_name":"Open reading frame","level":4,"score":0.384715735912323},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.36632847785949707},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.33424049615859985},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3277113735675812},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3026522994041443},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.25765472650527954},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.18547677993774414},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1359574794769287},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.10547396540641785},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.0},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/istc.2014.6955104","is_oa":false,"landing_page_url":"https://doi.org/10.1109/istc.2014.6955104","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 8th International Symposium on Turbo Codes and Iterative Information Processing (ISTC)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.8500000238418579,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W135467536","https://openalex.org/W1534252741","https://openalex.org/W1963573192","https://openalex.org/W1968545643","https://openalex.org/W2013460486","https://openalex.org/W2029252138","https://openalex.org/W2052825786","https://openalex.org/W2058057934","https://openalex.org/W2063814578","https://openalex.org/W2072391778","https://openalex.org/W2098792085","https://openalex.org/W2099111195","https://openalex.org/W2105943646","https://openalex.org/W2123942680","https://openalex.org/W2127170971","https://openalex.org/W2478708596","https://openalex.org/W2751862591","https://openalex.org/W2753933954","https://openalex.org/W4250288354","https://openalex.org/W6642499024","https://openalex.org/W6674851815"],"related_works":["https://openalex.org/W2220941019","https://openalex.org/W2092940849","https://openalex.org/W2096622955","https://openalex.org/W1998446997","https://openalex.org/W2145417073","https://openalex.org/W2091615508","https://openalex.org/W2606419610","https://openalex.org/W3194108781","https://openalex.org/W1983767600","https://openalex.org/W1996672697"],"abstract_inverted_index":{"An":[0],"analytical":[1],"model":[2,25],"to":[3,37,84],"determine":[4],"codon":[5,28],"transitions":[6],"in":[7,30],"alternative":[8,31,72],"reading":[9,32],"frames":[10,33],"based":[11],"on":[12],"the":[13,27,43,55,58,68,79],"statistical":[14],"properties":[15],"of":[16,57,63,67],"prokaryotic":[17],"genomes":[18],"within":[19],"annotated":[20],"genes":[21],"is":[22,35,75,82],"developed.":[23],"This":[24],"predicts":[26],"usage":[29],"and":[34],"applied":[36],"study":[38],"overlapping":[39,87],"genes.":[40,88],"We":[41],"investigate":[42],"standard":[44,69,80],"genetic":[45,73],"code":[46,59,70,81],"that":[47],"has":[48],"a":[49],"highly":[50],"nonrandom":[51],"structure":[52],"which":[53],"improves":[54],"robustness":[56],"against":[60],"several":[61],"types":[62],"errors.":[64],"A":[65],"comparison":[66],"with":[71],"codes":[74],"presented":[76],"investigating":[77],"if":[78],"optimized":[83],"allow":[85],"long":[86]},"counts_by_year":[{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":2}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
