{"id":"https://openalex.org/W2061095590","doi":"https://doi.org/10.1109/isspit.2013.6781922","title":"Parallel computing techniques for performance enhancement of a cDNA microarray gridding algorithm","display_name":"Parallel computing techniques for performance enhancement of a cDNA microarray gridding algorithm","publication_year":2013,"publication_date":"2013-12-01","ids":{"openalex":"https://openalex.org/W2061095590","doi":"https://doi.org/10.1109/isspit.2013.6781922","mag":"2061095590"},"language":"en","primary_location":{"id":"doi:10.1109/isspit.2013.6781922","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isspit.2013.6781922","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE International Symposium on Signal Processing and Information Technology","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://durham-repository.worktribe.com/output/1139960","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5005052027","display_name":"Stamos Katsigiannis","orcid":"https://orcid.org/0000-0001-9190-0941"},"institutions":[{"id":"https://openalex.org/I200777214","display_name":"National and Kapodistrian University of Athens","ror":"https://ror.org/04gnjpq42","country_code":"GR","type":"education","lineage":["https://openalex.org/I200777214"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Stamos Katsigiannis","raw_affiliation_strings":["Department of Informatics and Telecommunications, University of Athens, Athens, Greece","Dept. of Inf. & Telecommun., Nat. & Kapodistrian Univ. of Athens, Athens, Greece#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Informatics and Telecommunications, University of Athens, Athens, Greece","institution_ids":["https://openalex.org/I200777214"]},{"raw_affiliation_string":"Dept. of Inf. & Telecommun., Nat. & Kapodistrian Univ. of Athens, Athens, Greece#TAB#","institution_ids":["https://openalex.org/I200777214"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5044171013","display_name":"Dimitris Maroulis","orcid":"https://orcid.org/0000-0002-2721-9219"},"institutions":[{"id":"https://openalex.org/I200777214","display_name":"National and Kapodistrian University of Athens","ror":"https://ror.org/04gnjpq42","country_code":"GR","type":"education","lineage":["https://openalex.org/I200777214"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Dimitris Maroulis","raw_affiliation_strings":["Department of Informatics and Telecommunications, University of Athens, Athens, Greece","Dept. of Inf. & Telecommun., Nat. & Kapodistrian Univ. of Athens, Athens, Greece#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Informatics and Telecommunications, University of Athens, Athens, Greece","institution_ids":["https://openalex.org/I200777214"]},{"raw_affiliation_string":"Dept. of Inf. & Telecommun., Nat. & Kapodistrian Univ. of Athens, Athens, Greece#TAB#","institution_ids":["https://openalex.org/I200777214"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I200777214"],"apc_list":null,"apc_paid":null,"fwci":0.9967,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.79164768,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"27","issue":null,"first_page":"000446","last_page":"000451"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.9926000237464905,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9538000226020813,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8016049265861511},{"id":"https://openalex.org/keywords/cuda","display_name":"CUDA","score":0.7935208082199097},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.5692601799964905},{"id":"https://openalex.org/keywords/computational-complexity-theory","display_name":"Computational complexity theory","score":0.49985241889953613},{"id":"https://openalex.org/keywords/supercomputer","display_name":"Supercomputer","score":0.4860730469226837},{"id":"https://openalex.org/keywords/grid","display_name":"Grid","score":0.4598560929298401},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.44726720452308655},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.4392305016517639},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.42918241024017334},{"id":"https://openalex.org/keywords/computational-science","display_name":"Computational science","score":0.3890966773033142},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.07642990350723267}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8016049265861511},{"id":"https://openalex.org/C2778119891","wikidata":"https://www.wikidata.org/wiki/Q477690","display_name":"CUDA","level":2,"score":0.7935208082199097},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.5692601799964905},{"id":"https://openalex.org/C179799912","wikidata":"https://www.wikidata.org/wiki/Q205084","display_name":"Computational complexity theory","level":2,"score":0.49985241889953613},{"id":"https://openalex.org/C83283714","wikidata":"https://www.wikidata.org/wiki/Q121117","display_name":"Supercomputer","level":2,"score":0.4860730469226837},{"id":"https://openalex.org/C187691185","wikidata":"https://www.wikidata.org/wiki/Q2020720","display_name":"Grid","level":2,"score":0.4598560929298401},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.44726720452308655},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.4392305016517639},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.42918241024017334},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.3890966773033142},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.07642990350723267},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/isspit.2013.6781922","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isspit.2013.6781922","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE International Symposium on Signal Processing and Information Technology","raw_type":"proceedings-article"},{"id":"pmh:oai:durham-repository.worktribe.com:1139960","is_oa":true,"landing_page_url":"https://durham-repository.worktribe.com/output/1139960","pdf_url":null,"source":{"id":"https://openalex.org/S4306400188","display_name":"Durham Research Online (Durham University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I190082696","host_organization_name":"Durham University","host_organization_lineage":["https://openalex.org/I190082696"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Presentation / Conference Contribution"}],"best_oa_location":{"id":"pmh:oai:durham-repository.worktribe.com:1139960","is_oa":true,"landing_page_url":"https://durham-repository.worktribe.com/output/1139960","pdf_url":null,"source":{"id":"https://openalex.org/S4306400188","display_name":"Durham Research Online (Durham University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I190082696","host_organization_name":"Durham University","host_organization_lineage":["https://openalex.org/I190082696"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Presentation / Conference Contribution"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W1559956479","https://openalex.org/W1983786324","https://openalex.org/W1992242907","https://openalex.org/W2025391162","https://openalex.org/W2063339587","https://openalex.org/W2093025502","https://openalex.org/W2099388441","https://openalex.org/W2109832421","https://openalex.org/W2110984712","https://openalex.org/W2157528718","https://openalex.org/W2157924997","https://openalex.org/W2166195617","https://openalex.org/W2532233046","https://openalex.org/W2904250082","https://openalex.org/W4236025197","https://openalex.org/W6757219229"],"related_works":["https://openalex.org/W3189307731","https://openalex.org/W1582436825","https://openalex.org/W1428699136","https://openalex.org/W2949962288","https://openalex.org/W2364686214","https://openalex.org/W1998560227","https://openalex.org/W1996803181","https://openalex.org/W4309223525","https://openalex.org/W1501473830","https://openalex.org/W2979588510"],"abstract_inverted_index":{"cDNA":[0],"microarrays":[1],"are":[2,53],"a":[3,24,66],"powerful":[4],"tool":[5],"for":[6,106],"studying":[7],"gene":[8,46],"expression":[9,47],"levels.":[10],"A":[11],"challenging":[12],"and":[13,35,129],"complex":[14],"task":[15],"of":[16,23,44,73,86,103,120],"microarray":[17],"image":[18],"analysis":[19],"is":[20],"the":[21,28,31,45,63,87,95,101,114,121],"creation":[22],"grid":[25],"that":[26,99,113],"matches":[27],"spots":[29],"in":[30,91],"image.":[32],"Proposed":[33],"methods":[34,52],"tools":[36],"usually":[37],"require":[38],"human":[39],"intervention,":[40],"leading":[41,125],"to":[42,126],"variations":[43],"results.":[48],"Furthermore,":[49],"while":[50],"automatic":[51,75],"available,":[54],"they":[55],"present":[56,65],"high":[57],"computational":[58,123,132],"complexity.":[59],"In":[60],"this":[61],"work,":[62],"authors":[64],"performance":[67,128],"enhancement":[68],"via":[69],"GPU":[70],"computing":[71],"techniques":[72],"an":[74],"gridding":[76],"method,":[77],"previously":[78],"proposed":[79,115],"by":[80,93],"their":[81],"research":[82],"group.":[83],"Complex":[84],"steps":[85],"algorithm":[88],"were":[89],"computed":[90],"parallel":[92,109],"utilizing":[94],"NVIDIA":[96,104],"CUDA":[97],"architecture":[98],"allows":[100],"use":[102],"GPUs":[105],"general":[107],"purpose":[108],"computations.":[110],"Experiments":[111],"showed":[112],"approach":[116],"achieves":[117],"higher":[118],"utilization":[119],"available":[122],"resources,":[124],"enhanced":[127],"significantly":[130],"reduced":[131],"time.":[133]},"counts_by_year":[{"year":2016,"cited_by_count":1}],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}
