{"id":"https://openalex.org/W2112822946","doi":"https://doi.org/10.1109/isit.2010.5513668","title":"On reconstructing a string from its substring compositions","display_name":"On reconstructing a string from its substring compositions","publication_year":2010,"publication_date":"2010-06-01","ids":{"openalex":"https://openalex.org/W2112822946","doi":"https://doi.org/10.1109/isit.2010.5513668","mag":"2112822946"},"language":"en","primary_location":{"id":"doi:10.1109/isit.2010.5513668","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isit.2010.5513668","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2010 IEEE International Symposium on Information Theory","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022867638","display_name":"Jayadev Acharya","orcid":"https://orcid.org/0000-0003-2170-3015"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jayadev Acharya","raw_affiliation_strings":["ECE, University of California, San Diego, USA","[ECE, UCSD, USA]"],"affiliations":[{"raw_affiliation_string":"ECE, University of California, San Diego, USA","institution_ids":["https://openalex.org/I36258959"]},{"raw_affiliation_string":"[ECE, UCSD, USA]","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068466458","display_name":"Hirakendu Das","orcid":null},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hirakendu Das","raw_affiliation_strings":["ECE, University of California, San Diego, USA","[ECE, UCSD, USA]"],"affiliations":[{"raw_affiliation_string":"ECE, University of California, San Diego, USA","institution_ids":["https://openalex.org/I36258959"]},{"raw_affiliation_string":"[ECE, UCSD, USA]","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084947882","display_name":"Olgica Milenkovi\u0107","orcid":"https://orcid.org/0000-0002-1871-4912"},"institutions":[{"id":"https://openalex.org/I60922557","display_name":"Upper Iowa University","ror":"https://ror.org/02jhx4860","country_code":"US","type":"education","lineage":["https://openalex.org/I60922557"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Olgica Milenkovic","raw_affiliation_strings":["EE, UIUC, USA"],"affiliations":[{"raw_affiliation_string":"EE, UIUC, USA","institution_ids":["https://openalex.org/I60922557"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012034611","display_name":"Alon Orlitsky","orcid":null},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alon Orlitsky","raw_affiliation_strings":["ECE & CSE, University of California, San Diego, USA","ECE & CSE, UCSD, USA"],"affiliations":[{"raw_affiliation_string":"ECE & CSE, University of California, San Diego, USA","institution_ids":["https://openalex.org/I36258959"]},{"raw_affiliation_string":"ECE & CSE, UCSD, USA","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5102134875","display_name":"Shengjun Pan","orcid":null},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shengjun Pan","raw_affiliation_strings":["CSE, University of California, San Diego, USA","CSE, UCSD, USA"],"affiliations":[{"raw_affiliation_string":"CSE, University of California, San Diego, USA","institution_ids":["https://openalex.org/I36258959"]},{"raw_affiliation_string":"CSE, UCSD, USA","institution_ids":["https://openalex.org/I36258959"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5022867638"],"corresponding_institution_ids":["https://openalex.org/I36258959"],"apc_list":null,"apc_paid":null,"fwci":0.931,"has_fulltext":false,"cited_by_count":20,"citation_normalized_percentile":{"value":0.81689894,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"1238","last_page":"1242"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9937999844551086,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9925000071525574,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/substring","display_name":"Substring","score":0.9936412572860718},{"id":"https://openalex.org/keywords/string","display_name":"String (physics)","score":0.7546529769897461},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.5434790253639221},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.5261285305023193},{"id":"https://openalex.org/keywords/relation","display_name":"Relation (database)","score":0.48814067244529724},{"id":"https://openalex.org/keywords/approximate-string-matching","display_name":"Approximate string matching","score":0.4777488112449646},{"id":"https://openalex.org/keywords/bivariate-analysis","display_name":"Bivariate analysis","score":0.4304889142513275},{"id":"https://openalex.org/keywords/characterization","display_name":"Characterization (materials science)","score":0.42151254415512085},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3854261636734009},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3781789541244507},{"id":"https://openalex.org/keywords/discrete-mathematics","display_name":"Discrete mathematics","score":0.325507789850235},{"id":"https://openalex.org/keywords/data-structure","display_name":"Data structure","score":0.2702873945236206},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.15862974524497986},{"id":"https://openalex.org/keywords/pattern-matching","display_name":"Pattern matching","score":0.11677935719490051},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.07912474870681763},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.062000274658203125},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.05772244930267334}],"concepts":[{"id":"https://openalex.org/C182407805","wikidata":"https://www.wikidata.org/wiki/Q2626534","display_name":"Substring","level":3,"score":0.9936412572860718},{"id":"https://openalex.org/C157486923","wikidata":"https://www.wikidata.org/wiki/Q1376436","display_name":"String (physics)","level":2,"score":0.7546529769897461},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.5434790253639221},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.5261285305023193},{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.48814067244529724},{"id":"https://openalex.org/C32610155","wikidata":"https://www.wikidata.org/wiki/Q1798621","display_name":"Approximate string matching","level":3,"score":0.4777488112449646},{"id":"https://openalex.org/C64341305","wikidata":"https://www.wikidata.org/wiki/Q4919225","display_name":"Bivariate analysis","level":2,"score":0.4304889142513275},{"id":"https://openalex.org/C2780841128","wikidata":"https://www.wikidata.org/wiki/Q5073781","display_name":"Characterization (materials science)","level":2,"score":0.42151254415512085},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3854261636734009},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3781789541244507},{"id":"https://openalex.org/C118615104","wikidata":"https://www.wikidata.org/wiki/Q121416","display_name":"Discrete mathematics","level":1,"score":0.325507789850235},{"id":"https://openalex.org/C162319229","wikidata":"https://www.wikidata.org/wiki/Q175263","display_name":"Data structure","level":2,"score":0.2702873945236206},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.15862974524497986},{"id":"https://openalex.org/C68859911","wikidata":"https://www.wikidata.org/wiki/Q1503724","display_name":"Pattern matching","level":2,"score":0.11677935719490051},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.07912474870681763},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.062000274658203125},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.05772244930267334},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C37914503","wikidata":"https://www.wikidata.org/wiki/Q156495","display_name":"Mathematical physics","level":1,"score":0.0},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/isit.2010.5513668","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isit.2010.5513668","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2010 IEEE International Symposium on Information Theory","raw_type":"proceedings-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.728.2922","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.728.2922","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://people.csail.mit.edu/jayadev/papers/rcn_str_sbs.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":8,"referenced_works":["https://openalex.org/W1943218176","https://openalex.org/W2003389942","https://openalex.org/W2008907996","https://openalex.org/W2039327326","https://openalex.org/W2068910125","https://openalex.org/W2076597612","https://openalex.org/W3175367423","https://openalex.org/W4205666823"],"related_works":["https://openalex.org/W2051304374","https://openalex.org/W3043769852","https://openalex.org/W4297657329","https://openalex.org/W4286787697","https://openalex.org/W1505605100","https://openalex.org/W4291327800","https://openalex.org/W2188176457","https://openalex.org/W2963574866","https://openalex.org/W4308670360","https://openalex.org/W1967448802"],"abstract_inverted_index":{"Motivated":[0],"by":[1],"protein":[2],"sequencing,":[3],"we":[4],"consider":[5],"the":[6,13,23,42,51,56,63,68,76],"problem":[7,78],"of":[8,15,27,41,53,62,65,67,84],"reconstructing":[9],"a":[10,80],"string":[11,69,85],"from":[12,33],"compositions":[14,59],"its":[16],"substrings.":[17],"We":[18],"provide":[19],"several":[20],"results,":[21],"including":[22],"following.":[24],"General":[25],"classes":[26],"strings":[28,54],"that":[29],"cannot":[30],"be":[31],"distinguished":[32],"their":[34],"substring":[35,58],"compositions.":[36],"An":[37],"almost":[38],"complete":[39],"characterization":[40],"lengths":[43],"for":[44],"which":[45],"reconstruction":[46],"is":[47],"possible.":[48],"Bounds":[49],"on":[50],"number":[52,64],"with":[55],"same":[57],"in":[60],"terms":[61],"divisors":[66],"length":[70],"plus":[71],"one.":[72],"A":[73],"relation":[74],"to":[75],"turnpike":[77],"and":[79],"bivariate":[81],"polynomial":[82],"formulation":[83],"reconstruction.":[86]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":2}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
