{"id":"https://openalex.org/W2038646991","doi":"https://doi.org/10.1109/isda.2011.6121800","title":"Gene-gene interaction based clustering method for microarray data","display_name":"Gene-gene interaction based clustering method for microarray data","publication_year":2011,"publication_date":"2011-11-01","ids":{"openalex":"https://openalex.org/W2038646991","doi":"https://doi.org/10.1109/isda.2011.6121800","mag":"2038646991"},"language":"en","primary_location":{"id":"doi:10.1109/isda.2011.6121800","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isda.2011.6121800","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 11th International Conference on Intelligent Systems Design and Applications","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://idus.us.es/handle//11441/140298","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5074432818","display_name":"Norberto D\u00edaz\u2013D\u00edaz","orcid":"https://orcid.org/0000-0001-8100-8781"},"institutions":[{"id":"https://openalex.org/I95013407","display_name":"Universidad Pablo de Olavide","ror":"https://ror.org/02z749649","country_code":"ES","type":"education","lineage":["https://openalex.org/I95013407"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Norberto Diaz-Diaz","raw_affiliation_strings":["School of Engineering, Pablo de Olavide University, Seville, Spain","School of Engineering, Pablo de Olavide University, Seville, Spain#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Engineering, Pablo de Olavide University, Seville, Spain","institution_ids":["https://openalex.org/I95013407"]},{"raw_affiliation_string":"School of Engineering, Pablo de Olavide University, Seville, Spain#TAB#","institution_ids":["https://openalex.org/I95013407"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067223222","display_name":"Francisco G\u00f3mez-Vela","orcid":"https://orcid.org/0000-0001-7376-5790"},"institutions":[{"id":"https://openalex.org/I95013407","display_name":"Universidad Pablo de Olavide","ror":"https://ror.org/02z749649","country_code":"ES","type":"education","lineage":["https://openalex.org/I95013407"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Francisco Gomez-Vela","raw_affiliation_strings":["School of Engineering, Pablo de Olavide University, Seville, Spain","School of Engineering, Pablo de Olavide University, Seville, Spain#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Engineering, Pablo de Olavide University, Seville, Spain","institution_ids":["https://openalex.org/I95013407"]},{"raw_affiliation_string":"School of Engineering, Pablo de Olavide University, Seville, Spain#TAB#","institution_ids":["https://openalex.org/I95013407"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049817649","display_name":"Jes\u00fas S. Aguilar\u2013Ruiz","orcid":"https://orcid.org/0000-0002-2666-293X"},"institutions":[{"id":"https://openalex.org/I95013407","display_name":"Universidad Pablo de Olavide","ror":"https://ror.org/02z749649","country_code":"ES","type":"education","lineage":["https://openalex.org/I95013407"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jesus Aguilar-Ruiz","raw_affiliation_strings":["School of Engineering, Pablo de Olavide University, Seville, Spain","School of Engineering, Pablo de Olavide University, Seville, Spain#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Engineering, Pablo de Olavide University, Seville, Spain","institution_ids":["https://openalex.org/I95013407"]},{"raw_affiliation_string":"School of Engineering, Pablo de Olavide University, Seville, Spain#TAB#","institution_ids":["https://openalex.org/I95013407"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5072250611","display_name":"Jorge Garc\u00eda\u2013Guti\u00e9rrez","orcid":"https://orcid.org/0000-0002-1300-4647"},"institutions":[{"id":"https://openalex.org/I79238269","display_name":"Universidad de Sevilla","ror":"https://ror.org/03yxnpp24","country_code":"ES","type":"education","lineage":["https://openalex.org/I79238269"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jorge Garcia-Gutierrez","raw_affiliation_strings":["Department of Computer Science, University of Seville, Seville, Spain","Dept. of Comput. Sci., Univ. of Seville, Seville, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Seville, Seville, Spain","institution_ids":["https://openalex.org/I79238269"]},{"raw_affiliation_string":"Dept. of Comput. Sci., Univ. of Seville, Seville, Spain","institution_ids":["https://openalex.org/I79238269"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.09582518,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"22","issue":null,"first_page":"1067","last_page":"1073"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9674000144004822,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.7228878140449524},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5701483488082886},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5465523600578308},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.43097391724586487},{"id":"https://openalex.org/keywords/preprocessor","display_name":"Preprocessor","score":0.422437846660614},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3316289782524109},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1556910276412964},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.13332578539848328}],"concepts":[{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.7228878140449524},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5701483488082886},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5465523600578308},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.43097391724586487},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.422437846660614},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3316289782524109},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1556910276412964},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.13332578539848328}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/isda.2011.6121800","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isda.2011.6121800","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 11th International Conference on Intelligent Systems Design and Applications","raw_type":"proceedings-article"},{"id":"pmh:oai:idus.us.es:11441/140298","is_oa":true,"landing_page_url":"https://idus.us.es/handle//11441/140298","pdf_url":null,"source":{"id":"https://openalex.org/S4306401665","display_name":"Deposito de Investigacion Universidad de Sevilla (University of Seville)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I79238269","host_organization_name":"Universidad de Sevilla","host_organization_lineage":["https://openalex.org/I79238269"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/conferenceObject"}],"best_oa_location":{"id":"pmh:oai:idus.us.es:11441/140298","is_oa":true,"landing_page_url":"https://idus.us.es/handle//11441/140298","pdf_url":null,"source":{"id":"https://openalex.org/S4306401665","display_name":"Deposito de Investigacion Universidad de Sevilla (University of Seville)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I79238269","host_organization_name":"Universidad de Sevilla","host_organization_lineage":["https://openalex.org/I79238269"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/conferenceObject"},"sustainable_development_goals":[{"score":0.5899999737739563,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W1560863993","https://openalex.org/W1769049279","https://openalex.org/W1835959768","https://openalex.org/W1952341222","https://openalex.org/W1981788436","https://openalex.org/W2001781153","https://openalex.org/W2016493165","https://openalex.org/W2029441111","https://openalex.org/W2098864059","https://openalex.org/W2103453943","https://openalex.org/W2109363337","https://openalex.org/W2125310307","https://openalex.org/W2133098435","https://openalex.org/W2133636765","https://openalex.org/W2135000328","https://openalex.org/W2145683967","https://openalex.org/W2149421377","https://openalex.org/W2164365774","https://openalex.org/W2167519901","https://openalex.org/W2168980979","https://openalex.org/W2172192916","https://openalex.org/W2172291596","https://openalex.org/W4213265720","https://openalex.org/W6637940469","https://openalex.org/W6685105910"],"related_works":["https://openalex.org/W2804364458","https://openalex.org/W2397288865","https://openalex.org/W4298130764","https://openalex.org/W2132641928","https://openalex.org/W2090259340","https://openalex.org/W4310225030","https://openalex.org/W2368524271","https://openalex.org/W4247116873","https://openalex.org/W2083665254","https://openalex.org/W1629127207"],"abstract_inverted_index":{"In":[0,52],"this":[1,24],"paper,":[2],"we":[3,59],"propose":[4],"a":[5,16,61,70,122,130,158,168],"greedy":[6],"clustering":[7],"algorithm":[8,80],"to":[9,19,32,54,67,84,108,128],"identify":[10],"groups":[11,41],"of":[12,23,43,72,115,138,155,162,171],"related":[13],"genes":[14,29,44,73,165],"and":[15,95,98,104,149,164],"new":[17],"measure":[18],"improve":[20],"the":[21,63,82,87,100,113,145,179],"results":[22],"algorithm.":[25],"Clustering":[26],"algorithms":[27],"analyze":[28],"in":[30,57,126,178],"order":[31,53],"group":[33],"those":[34],"with":[35],"similar":[36,47],"behavior.":[37],"Instead,":[38],"our":[39,139],"approach":[40,140],"pairs":[42],"that":[45],"present":[46],"positive":[48],"and/or":[49],"negative":[50],"interactions.":[51],"avoid":[55],"noise":[56],"clusters,":[58],"apply":[60],"threshold,":[62],"neighbouring":[64,101,132],"minimun":[65,102,133],"index(\u03bb),":[66],"know":[68],"if":[69],"pair":[71],"have":[74,119],"interaction":[75],"enough":[76],"or":[77],"not.":[78],"The":[79,136,152],"allows":[81],"researcher":[83],"modify":[85],"all":[86],"criteria:":[88],"discretization":[89],"mapping":[90,93],"function,":[91,97],"gene-gene":[92],"function":[94],"filtering":[96],"even":[99],"index,":[103,134],"provides":[105],"much":[106],"flexibility":[107],"obtain":[109,129],"clusters":[110,156],"based":[111],"on":[112,144],"level":[114,161,170],"precision":[116],"needed.":[117],"We":[118],"carried":[120],"out":[121],"deep":[123],"experimental":[124],"study":[125],"databases":[127],"good":[131],"\u03bb.":[135],"performance":[137],"is":[141,175],"experimentally":[142],"tested":[143],"yeast,":[146],"yeast":[147],"cell-cycle":[148],"malaria":[150],"datasets.":[151],"final":[153],"number":[154],"has":[157],"very":[159],"high":[160],"customization":[163],"within":[166],"show":[167],"significant":[169],"cohesion,":[172],"as":[173],"it":[174],"shown":[176],"graphically":[177],"experiments.":[180]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
