{"id":"https://openalex.org/W2069479408","doi":"https://doi.org/10.1109/isda.2010.5687077","title":"Using a Support Vector Machine to identify pre-miRNAs in soybean (Glycine max) introns","display_name":"Using a Support Vector Machine to identify pre-miRNAs in soybean (Glycine max) introns","publication_year":2010,"publication_date":"2010-11-01","ids":{"openalex":"https://openalex.org/W2069479408","doi":"https://doi.org/10.1109/isda.2010.5687077","mag":"2069479408"},"language":"en","primary_location":{"id":"doi:10.1109/isda.2010.5687077","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isda.2010.5687077","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2010 10th International Conference on Intelligent Systems Design and Applications","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053592433","display_name":"P. R. Silla","orcid":null},"institutions":[{"id":"https://openalex.org/I127110123","display_name":"Universidade Estadual de Londrina","ror":"https://ror.org/01585b035","country_code":"BR","type":"education","lineage":["https://openalex.org/I127110123"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Paulo R. Silla","raw_affiliation_strings":["Computer Science Department, State University of Londrina, Londrina, Parana, Brazil","Computer Science Department, State University of Londrina (UEL), Londrina, PR, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Science Department, State University of Londrina, Londrina, Parana, Brazil","institution_ids":["https://openalex.org/I127110123"]},{"raw_affiliation_string":"Computer Science Department, State University of Londrina (UEL), Londrina, PR, Brazil","institution_ids":["https://openalex.org/I127110123"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077838073","display_name":"Maria Ang\u00e9lica de Oliveira Camargo-Brunetto","orcid":null},"institutions":[{"id":"https://openalex.org/I127110123","display_name":"Universidade Estadual de Londrina","ror":"https://ror.org/01585b035","country_code":"BR","type":"education","lineage":["https://openalex.org/I127110123"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Maria Angelica de O. Camargo-Brunetto","raw_affiliation_strings":["Computer Science Department, State University of Londrina, Londrina, Parana, Brazil","Computer Science Department, State University of Londrina (UEL), Londrina, PR, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Science Department, State University of Londrina, Londrina, Parana, Brazil","institution_ids":["https://openalex.org/I127110123"]},{"raw_affiliation_string":"Computer Science Department, State University of Londrina (UEL), Londrina, PR, Brazil","institution_ids":["https://openalex.org/I127110123"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5020393763","display_name":"Eliseu Binneck","orcid":"https://orcid.org/0000-0002-0942-0437"},"institutions":[{"id":"https://openalex.org/I199691007","display_name":"Brazilian Agricultural Research Corporation","ror":"https://ror.org/0482b5b22","country_code":"BR","type":"government","lineage":["https://openalex.org/I199691007"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Eliseu Binneck","raw_affiliation_strings":["Laboratory of Bioinformatics, Brazilian Agricultural Research Corporation, Londrina, Parana, Brazil","Laboratory for Bioinformatics, Brazilian Agricultural Research Corporation, Embrapa Soybean, Londrina-PR, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Bioinformatics, Brazilian Agricultural Research Corporation, Londrina, Parana, Brazil","institution_ids":["https://openalex.org/I199691007"]},{"raw_affiliation_string":"Laboratory for Bioinformatics, Brazilian Agricultural Research Corporation, Embrapa Soybean, Londrina-PR, Brazil","institution_ids":["https://openalex.org/I199691007"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1235","last_page":"1241"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10494","display_name":"Plant Virus Research Studies","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10494","display_name":"Plant Virus Research Studies","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.8308531045913696},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.6864067912101746},{"id":"https://openalex.org/keywords/glycine","display_name":"Glycine","score":0.5990259647369385},{"id":"https://openalex.org/keywords/intron","display_name":"Intron","score":0.5843971967697144},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5541434288024902},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5334537029266357},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.5301583409309387},{"id":"https://openalex.org/keywords/small-rna","display_name":"Small RNA","score":0.4620906710624695},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4529879689216614},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.41101646423339844},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3837658166885376},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3647318482398987},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3448706269264221},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.320556640625},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.28207316994667053},{"id":"https://openalex.org/keywords/amino-acid","display_name":"Amino acid","score":0.13785389065742493},{"id":"https://openalex.org/keywords/botany","display_name":"Botany","score":0.07455861568450928}],"concepts":[{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.8308531045913696},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.6864067912101746},{"id":"https://openalex.org/C2777756961","wikidata":"https://www.wikidata.org/wiki/Q620730","display_name":"Glycine","level":3,"score":0.5990259647369385},{"id":"https://openalex.org/C94671646","wikidata":"https://www.wikidata.org/wiki/Q207551","display_name":"Intron","level":3,"score":0.5843971967697144},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5541434288024902},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5334537029266357},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.5301583409309387},{"id":"https://openalex.org/C2779341050","wikidata":"https://www.wikidata.org/wiki/Q24287527","display_name":"Small RNA","level":4,"score":0.4620906710624695},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4529879689216614},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.41101646423339844},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3837658166885376},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3647318482398987},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3448706269264221},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.320556640625},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.28207316994667053},{"id":"https://openalex.org/C515207424","wikidata":"https://www.wikidata.org/wiki/Q8066","display_name":"Amino acid","level":2,"score":0.13785389065742493},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.07455861568450928}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/isda.2010.5687077","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isda.2010.5687077","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2010 10th International Conference on Intelligent Systems Design and Applications","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":31,"referenced_works":["https://openalex.org/W1512098439","https://openalex.org/W1543796220","https://openalex.org/W1845151788","https://openalex.org/W1902809146","https://openalex.org/W1920564293","https://openalex.org/W1990476811","https://openalex.org/W2004130948","https://openalex.org/W2012986985","https://openalex.org/W2018774702","https://openalex.org/W2047546334","https://openalex.org/W2049065350","https://openalex.org/W2051728363","https://openalex.org/W2055043387","https://openalex.org/W2058752028","https://openalex.org/W2061011128","https://openalex.org/W2078899492","https://openalex.org/W2093213907","https://openalex.org/W2098044747","https://openalex.org/W2100317431","https://openalex.org/W2106144124","https://openalex.org/W2109943925","https://openalex.org/W2120794445","https://openalex.org/W2121289117","https://openalex.org/W2126732736","https://openalex.org/W2156847802","https://openalex.org/W2171946922","https://openalex.org/W2544883878","https://openalex.org/W4236236547","https://openalex.org/W6630527977","https://openalex.org/W6640312042","https://openalex.org/W6684854315"],"related_works":["https://openalex.org/W3139555495","https://openalex.org/W2103026185","https://openalex.org/W2046677216","https://openalex.org/W2072863028","https://openalex.org/W2045666137","https://openalex.org/W2112884159","https://openalex.org/W2019966612","https://openalex.org/W2323693199","https://openalex.org/W2795873045","https://openalex.org/W3009983268"],"abstract_inverted_index":{"MicroRNAs":[0],"(miRNAs)":[1],"are":[2,45],"small":[3,25],"Ribonucleic":[4],"Acid":[5],"(RNA)":[6],"molecules":[7],"\u223c18\u201322":[8],"nucleotides":[9],"(nt)":[10],"in":[11,17,29,48,74],"length":[12],"that":[13,80],"regulates":[14],"gene":[15],"expression":[16],"animals,":[18],"plants":[19],"and":[20,27,42,52,99],"viruses.":[21],"Due":[22],"to":[23,50,69,91],"its":[24],"size":[26],"occurrence":[28],"different":[30],"development":[31],"stages":[32],"of":[33,38,88,102],"organisms,":[34],"the":[35,93],"experimental":[36],"identification":[37],"miRNAs":[39],"becomes":[40],"difficult,":[41],"computational":[43],"approaches":[44],"being":[46],"developed":[47,82],"order":[49],"precede":[51],"guide":[53],"biological":[54],"experiments.":[55],"This":[56],"paper":[57],"describes":[58],"our":[59],"approach":[60],"based":[61],"on":[62],"a":[63,84],"Support":[64],"Vector":[65],"Machine":[66],"(SVM)":[67],"algorithm":[68],"identify":[70],"miRNA's":[71],"precursor":[72],"(pre-miRNA)":[73],"soybean":[75],"(Glycine":[76],"max)":[77],"transcript":[78],"introns,":[79],"was":[81],"using":[83],"secondary":[85],"structure":[86],"predictor":[87],"pre-miRNAs":[89],"sequences":[90],"establish":[92],"feature":[94],"set":[95],"for":[96],"training,":[97],"testing":[98],"validation":[100],"phases":[101],"SVM":[103],"algorithm.":[104]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
