{"id":"https://openalex.org/W7161759408","doi":"https://doi.org/10.1109/isbi61048.2026.11515865","title":"LOCBAM: Advancing 3D Patch-Based Image Segmentation by Integrating Location Context","display_name":"LOCBAM: Advancing 3D Patch-Based Image Segmentation by Integrating Location Context","publication_year":2026,"publication_date":"2026-04-08","ids":{"openalex":"https://openalex.org/W7161759408","doi":"https://doi.org/10.1109/isbi61048.2026.11515865"},"language":"en","primary_location":{"id":"doi:10.1109/isbi61048.2026.11515865","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi61048.2026.11515865","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2026 IEEE 23rd International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5123553407","display_name":"Donnate Hooft","orcid":null},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Donnate Hooft","raw_affiliation_strings":["School of Computation, Information and Technology, Technical University,Munich,Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computation, Information and Technology, Technical University,Munich,Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107222720","display_name":"Stefan M. Fischer","orcid":null},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Stefan M. Fischer","raw_affiliation_strings":["School of Computation, Information and Technology, Technical University,Munich,Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computation, Information and Technology, Technical University,Munich,Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5136564245","display_name":"Cosmin Bercea","orcid":null},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Cosmin Bercea","raw_affiliation_strings":["School of Computation, Information and Technology, Technical University,Munich,Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computation, Information and Technology, Technical University,Munich,Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5135510463","display_name":"Jan C. Peeken","orcid":null},"institutions":[{"id":"https://openalex.org/I2802619606","display_name":"TUM Klinikum","ror":"https://ror.org/04jc43x05","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2802619606","https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Jan C. Peeken","raw_affiliation_strings":["School of Medicine and Klinikum Rechts der Isar,Department of Radiation Oncology"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medicine and Klinikum Rechts der Isar,Department of Radiation Oncology","institution_ids":["https://openalex.org/I2802619606"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5136581304","display_name":"Julia A. Schnabel","orcid":null},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Julia A. Schnabel","raw_affiliation_strings":["School of Computation, Information and Technology, Technical University,Munich,Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computation, Information and Technology, Technical University,Munich,Germany","institution_ids":["https://openalex.org/I62916508"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.59992985,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.19030000269412994,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.19030000269412994,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10036","display_name":"Advanced Neural Network Applications","score":0.18389999866485596,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10191","display_name":"Robotics and Sensor-Based Localization","score":0.037700001150369644,"subfield":{"id":"https://openalex.org/subfields/2202","display_name":"Aerospace Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5806000232696533},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.47029998898506165},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.4700999855995178},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.3978999853134155},{"id":"https://openalex.org/keywords/image-processing","display_name":"Image processing","score":0.33899998664855957},{"id":"https://openalex.org/keywords/scale-space-segmentation","display_name":"Scale-space segmentation","score":0.3352999985218048}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.61080002784729},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5835000276565552},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5806000232696533},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.565500020980835},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.47029998898506165},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.4700999855995178},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.3978999853134155},{"id":"https://openalex.org/C9417928","wikidata":"https://www.wikidata.org/wiki/Q1070689","display_name":"Image processing","level":3,"score":0.33899998664855957},{"id":"https://openalex.org/C65885262","wikidata":"https://www.wikidata.org/wiki/Q7429708","display_name":"Scale-space segmentation","level":4,"score":0.3352999985218048},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.314300000667572},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.29980000853538513},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.29030001163482666},{"id":"https://openalex.org/C25694479","wikidata":"https://www.wikidata.org/wiki/Q7446278","display_name":"Segmentation-based object categorization","level":5,"score":0.2583000063896179}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/isbi61048.2026.11515865","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi61048.2026.11515865","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2026 IEEE 23rd International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"},{"id":"pmh:oai:kclpure.kcl.ac.uk:publications/d6c5d894-22b3-4593-89e9-952cc856ee48","is_oa":false,"landing_page_url":"https://kclpure.kcl.ac.uk/portal/en/publications/d6c5d894-22b3-4593-89e9-952cc856ee48","pdf_url":null,"source":{"id":"https://openalex.org/S4306400216","display_name":"Research Portal (King's College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I183935753","host_organization_name":"King's College London","host_organization_lineage":["https://openalex.org/I183935753"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Hooft, D, Fischer, S M, Bercea, C, Peeken, J C & Schnabel, J A 2026, LOCBAM : Advancing 3D Patch-Based Image Segmentation by Integrating Location Context. in ISBI 2026 - 23rd IEEE International Symposium on Biomedical Imaging. Proceedings - International Symposium on Biomedical Imaging, vol. 2026-April, 23rd IEEE International Symposium on Biomedical Imaging, ISBI 2026, London, United Kingdom, 8/04/2026. https://doi.org/10.1109/ISBI61048.2026.11515865","raw_type":"info:eu-repo/semantics/publishedVersion"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3093681824","display_name":"Entwicklung und externe Validierung von Modellen der k\u00fcnstlichen Intelligenz zur Analyse von CT und Dosisdaten zur Vorhersage der radiogenen Pneumonitis in Patienten mit Bronchialkarzinomen basierend auf der multizentrischen prospektiven REQUITE Studie","funder_award_id":"515279324","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":15,"referenced_works":["https://openalex.org/W2789256791","https://openalex.org/W2958927224","https://openalex.org/W2963904968","https://openalex.org/W3014974815","https://openalex.org/W3027619016","https://openalex.org/W3034958977","https://openalex.org/W3150579659","https://openalex.org/W4212875960","https://openalex.org/W4367154388","https://openalex.org/W4387211595","https://openalex.org/W4395050872","https://openalex.org/W4397290563","https://openalex.org/W4403658290","https://openalex.org/W6902762063","https://openalex.org/W7133225142"],"related_works":[],"abstract_inverted_index":{"Patch-based":[0],"methods":[1],"are":[2],"widely":[3],"used":[4],"in":[5,14,51],"3D":[6,53],"medical":[7],"image":[8],"segmentation":[9,34,54,82],"to":[10],"address":[11],"memory":[12],"constraints":[13],"processing":[15],"highresolution":[16],"volumetric":[17],"data.":[18],"However,":[19],"these":[20],"approaches":[21],"often":[22],"neglect":[23],"the":[24,28,46],"patch's":[25],"location":[26,49,76],"within":[27],"global":[29,90],"volume,":[30],"which":[31],"can":[32],"limit":[33],"performance":[35],"when":[36],"anatomical":[37],"context":[38,50,77,91],"is":[39,92,104],"important.":[40],"In":[41],"this":[42],"paper,":[43],"we":[44],"investigate":[45],"role":[47],"of":[48],"patch-based":[52],"and":[55,71,80],"propose":[56],"a":[57],"novel":[58],"attention":[59],"mechanism,":[60],"LocBAM,":[61],"that":[62,74],"explicitly":[63],"processes":[64],"spatial":[65],"information.":[66],"Experiments":[67],"on":[68],"BTCV,":[69],"AMOS22,":[70],"KiTS23":[72],"demonstrate":[73],"incorporating":[75],"stabilizes":[78],"training":[79],"improves":[81],"performance,":[83],"particularly":[84],"under":[85],"low":[86],"patch-to-volume":[87],"coverage":[88],"where":[89],"missing.":[93],"Furthermore,":[94],"LocBAM":[95],"consistently":[96],"outperforms":[97],"classical":[98],"coordinate":[99],"encoding":[100],"via":[101],"CoordConv.":[102],"Code":[103],"publicly":[105],"available":[106],"at":[107],"https://github.com/compai-lab/2026-ISBI-hooft.":[108]},"counts_by_year":[],"updated_date":"2026-08-06T08:24:18.245995","created_date":"2026-05-21T00:00:00"}