{"id":"https://openalex.org/W7161764997","doi":"https://doi.org/10.1109/isbi61048.2026.11515685","title":"A Continuous and Interpretable Morphometric for Robust Quantification of Dynamic Biological Shapes","display_name":"A Continuous and Interpretable Morphometric for Robust Quantification of Dynamic Biological Shapes","publication_year":2026,"publication_date":"2026-04-08","ids":{"openalex":"https://openalex.org/W7161764997","doi":"https://doi.org/10.1109/isbi61048.2026.11515685"},"language":null,"primary_location":{"id":"doi:10.1109/isbi61048.2026.11515685","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi61048.2026.11515685","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2026 IEEE 23rd International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5114620192","display_name":"Roua Rouatbi","orcid":null},"institutions":[{"id":"https://openalex.org/I4210165059","display_name":"Hochschule f\u00fcr Technik und Wirtschaft Dresden \u2013 University of Applied Sciences","ror":"https://ror.org/05q5pk319","country_code":"DE","type":"education","lineage":["https://openalex.org/I4210165059"]},{"id":"https://openalex.org/I78650965","display_name":"Technische Universit\u00e4t Dresden","ror":"https://ror.org/042aqky30","country_code":"DE","type":"education","lineage":["https://openalex.org/I78650965"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Roua Rouatbi","raw_affiliation_strings":["Dresden University of Technology,Faculty of Computer Science"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dresden University of Technology,Faculty of Computer Science","institution_ids":["https://openalex.org/I4210165059","https://openalex.org/I78650965"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074660388","display_name":"Juan-Esteban Suarez Cardona","orcid":"https://orcid.org/0000-0002-1990-2413"},"institutions":[{"id":"https://openalex.org/I8204097","display_name":"Ludwig-Maximilians-Universit\u00e4t M\u00fcnchen","ror":"https://ror.org/05591te55","country_code":"DE","type":"education","lineage":["https://openalex.org/I8204097"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Juan-Esteban Suarez Cardona","raw_affiliation_strings":["Ludwig-Maximilians-Universitat München"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Ludwig-Maximilians-Universitat München","institution_ids":["https://openalex.org/I8204097"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5117175864","display_name":"Alba Villaronga-Luque","orcid":null},"institutions":[{"id":"https://openalex.org/I4210159854","display_name":"Max Planck Institute of Molecular Cell Biology and Genetics","ror":"https://ror.org/05b8d3w18","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210159854"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Alba Villaronga-Luque","raw_affiliation_strings":["Max Planck Institute of Molecular Cell Biology and Genetics"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Max Planck Institute of Molecular Cell Biology and Genetics","institution_ids":["https://openalex.org/I4210159854"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014414006","display_name":"Jesse V. Veenvliet","orcid":"https://orcid.org/0000-0002-1191-2975"},"institutions":[{"id":"https://openalex.org/I4210159854","display_name":"Max Planck Institute of Molecular Cell Biology and Genetics","ror":"https://ror.org/05b8d3w18","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210159854"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Jesse V. Veenvliet","raw_affiliation_strings":["Max Planck Institute of Molecular Cell Biology and Genetics"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Max Planck Institute of Molecular Cell Biology and Genetics","institution_ids":["https://openalex.org/I4210159854"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5088460001","display_name":"Ivo F. Sbalzarini","orcid":"https://orcid.org/0000-0003-4414-4340"},"institutions":[{"id":"https://openalex.org/I4210165059","display_name":"Hochschule f\u00fcr Technik und Wirtschaft Dresden \u2013 University of Applied Sciences","ror":"https://ror.org/05q5pk319","country_code":"DE","type":"education","lineage":["https://openalex.org/I4210165059"]},{"id":"https://openalex.org/I78650965","display_name":"Technische Universit\u00e4t Dresden","ror":"https://ror.org/042aqky30","country_code":"DE","type":"education","lineage":["https://openalex.org/I78650965"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Ivo F. Sbalzarini","raw_affiliation_strings":["Dresden University of Technology,Faculty of Computer Science"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dresden University of Technology,Faculty of Computer Science","institution_ids":["https://openalex.org/I4210165059","https://openalex.org/I78650965"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5114620192"],"corresponding_institution_ids":["https://openalex.org/I4210165059","https://openalex.org/I78650965"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.94425568,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"5"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12417","display_name":"Morphological variations and asymmetry","score":0.8575000166893005,"subfield":{"id":"https://openalex.org/subfields/2608","display_name":"Geometry and Topology"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12417","display_name":"Morphological variations and asymmetry","score":0.8575000166893005,"subfield":{"id":"https://openalex.org/subfields/2608","display_name":"Geometry and Topology"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.03999999910593033,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.024700000882148743,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.48249998688697815},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.3059999942779541},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.2522999942302704},{"id":"https://openalex.org/keywords/noise","display_name":"Noise (video)","score":0.251800000667572}],"concepts":[{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5325000286102295},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.48249998688697815},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.47200000286102295},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.32249999046325684},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.3059999942779541},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2935999929904938},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.2522999942302704},{"id":"https://openalex.org/C99498987","wikidata":"https://www.wikidata.org/wiki/Q2210247","display_name":"Noise (video)","level":3,"score":0.251800000667572},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.24729999899864197},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.23469999432563782}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/isbi61048.2026.11515685","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi61048.2026.11515685","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2026 IEEE 23rd International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/13","display_name":"Climate action","score":0.49755415320396423}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":15,"referenced_works":["https://openalex.org/W1855169650","https://openalex.org/W2029997366","https://openalex.org/W2032618685","https://openalex.org/W2051688318","https://openalex.org/W2093834886","https://openalex.org/W2323063542","https://openalex.org/W2593302803","https://openalex.org/W2895161737","https://openalex.org/W2964209273","https://openalex.org/W2997591727","https://openalex.org/W3110953611","https://openalex.org/W4237869511","https://openalex.org/W4252316495","https://openalex.org/W4400574046","https://openalex.org/W4409502665"],"related_works":[],"abstract_inverted_index":{"We":[0,73],"introduce":[1],"the":[2,75],"Push-Forward":[3],"Signed":[4],"Distance":[5],"Morphometric":[6],"(PF-SDM)":[7],"for":[8,36],"shape":[9,37,71],"quantification":[10],"in":[11,90,97],"biomedical":[12],"imaging.":[13],"The":[14,42],"PF-SDM":[15,43,76],"compactly":[16],"encodes":[17],"geometric":[18],"and":[19,28,33,39,51,60,83,100],"topological":[20],"properties":[21],"of":[22],"closed":[23],"shapes,":[24],"including":[25],"their":[26],"skeleton":[27],"symmetries.":[29],"This":[30],"provides":[31],"robust":[32],"interpretable":[34],"features":[35],"comparison":[38],"machine":[40],"learning.":[41],"is":[44],"mathematically":[45],"smooth,":[46],"providing":[47],"access":[48],"to":[49,57,86],"gradients":[50],"differential-geometric":[52],"quantities.":[53],"It":[54],"also":[55],"extends":[56],"temporal":[58],"dynamics":[59],"allows":[61],"fusing":[62],"spatial":[63],"intensity":[64],"distributions,":[65],"such":[66],"as":[67],"genetic":[68],"markers,":[69],"with":[70],"dynamics.":[72],"present":[74],"theory,":[77],"benchmark":[78],"it":[79,85],"on":[80],"synthetic":[81],"data,":[82],"apply":[84],"predicting":[87],"body-axis":[88],"formation":[89],"mouse":[91],"gastruloids,":[92],"outperforming":[93],"a":[94],"CNN":[95],"baseline":[96],"both":[98],"accuracy":[99],"speed.":[101]},"counts_by_year":[],"updated_date":"2026-05-22T06:13:13.366637","created_date":"2026-05-21T00:00:00"}