{"id":"https://openalex.org/W4410296630","doi":"https://doi.org/10.1109/isbi60581.2025.10980899","title":"Attention-Enhanced UNet for Automated Gleason Score 3 Tumor Segmentation in Histopathological Whole Slide Images","display_name":"Attention-Enhanced UNet for Automated Gleason Score 3 Tumor Segmentation in Histopathological Whole Slide Images","publication_year":2025,"publication_date":"2025-04-14","ids":{"openalex":"https://openalex.org/W4410296630","doi":"https://doi.org/10.1109/isbi60581.2025.10980899"},"language":"en","primary_location":{"id":"doi:10.1109/isbi60581.2025.10980899","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi60581.2025.10980899","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2025 IEEE 22nd International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5086554613","display_name":"Biniyam Mezgebo","orcid":null},"institutions":[{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Biniyam Mezgebo","raw_affiliation_strings":["University of Calgary,Department Department of Pathology and Laboratory Medicine,Canada"],"affiliations":[{"raw_affiliation_string":"University of Calgary,Department Department of Pathology and Laboratory Medicine,Canada","institution_ids":["https://openalex.org/I168635309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048264161","display_name":"Joema Felipe Lima","orcid":null},"institutions":[{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Joema Lima","raw_affiliation_strings":["University of Calgary,Department Department of Pathology and Laboratory Medicine,Canada"],"affiliations":[{"raw_affiliation_string":"University of Calgary,Department Department of Pathology and Laboratory Medicine,Canada","institution_ids":["https://openalex.org/I168635309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054510053","display_name":"Abdoljalil Addeh","orcid":"https://orcid.org/0000-0003-2727-4557"},"institutions":[{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Abdoljalil Addeh","raw_affiliation_strings":["University of Calgary,Department of Biomedical Engineering,Canada"],"affiliations":[{"raw_affiliation_string":"University of Calgary,Department of Biomedical Engineering,Canada","institution_ids":["https://openalex.org/I168635309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5093015150","display_name":"Yousif Al-Khoury","orcid":"https://orcid.org/0009-0005-7197-1845"},"institutions":[{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Yousif Al-Khoury","raw_affiliation_strings":["University of Calgary,Department of Biomedical Engineering,Canada"],"affiliations":[{"raw_affiliation_string":"University of Calgary,Department of Biomedical Engineering,Canada","institution_ids":["https://openalex.org/I168635309"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Wooju Chung","orcid":null},"institutions":[{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Wooju Chung","raw_affiliation_strings":["University of Calgary,Department Department of Pathology and Laboratory Medicine,Canada"],"affiliations":[{"raw_affiliation_string":"University of Calgary,Department Department of Pathology and Laboratory Medicine,Canada","institution_ids":["https://openalex.org/I168635309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012063931","display_name":"Tarek A. Bismar","orcid":"https://orcid.org/0000-0002-9190-5088"},"institutions":[{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Tarek A. Bismar","raw_affiliation_strings":["University of Calgary,Department Department of Pathology and Laboratory Medicine,Canada"],"affiliations":[{"raw_affiliation_string":"University of Calgary,Department Department of Pathology and Laboratory Medicine,Canada","institution_ids":["https://openalex.org/I168635309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012020840","display_name":"M. Ethan MacDonald","orcid":"https://orcid.org/0000-0001-5421-3536"},"institutions":[{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"M. Ethan MacDonald","raw_affiliation_strings":["University of Calgary,Department of Biomedical Engineering,Canada"],"affiliations":[{"raw_affiliation_string":"University of Calgary,Department of Biomedical Engineering,Canada","institution_ids":["https://openalex.org/I168635309"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5064850404","display_name":"Dylan R. Pillai","orcid":"https://orcid.org/0000-0001-9518-5551"},"institutions":[{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Dylan R. Pillai","raw_affiliation_strings":["University of Calgary,Department Department of Pathology and Laboratory Medicine,Canada"],"affiliations":[{"raw_affiliation_string":"University of Calgary,Department Department of Pathology and Laboratory Medicine,Canada","institution_ids":["https://openalex.org/I168635309"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5086554613"],"corresponding_institution_ids":["https://openalex.org/I168635309"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.04465201,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"5"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9933000206947327,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9933000206947327,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9932000041007996,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T14510","display_name":"Medical Imaging and Analysis","score":0.9294000267982483,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6290111541748047},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.6129019260406494},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5686642527580261},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.5678008794784546},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.48929592967033386},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.32129967212677}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6290111541748047},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.6129019260406494},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5686642527580261},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.5678008794784546},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.48929592967033386},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.32129967212677}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/isbi60581.2025.10980899","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi60581.2025.10980899","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2025 IEEE 22nd International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320310537","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":15,"referenced_works":["https://openalex.org/W1656766859","https://openalex.org/W1901129140","https://openalex.org/W1998118468","https://openalex.org/W2103243046","https://openalex.org/W2132162500","https://openalex.org/W2772723798","https://openalex.org/W2889646458","https://openalex.org/W2949676527","https://openalex.org/W2962914239","https://openalex.org/W2978882452","https://openalex.org/W2995681261","https://openalex.org/W4313837151","https://openalex.org/W4388342094","https://openalex.org/W4390006537","https://openalex.org/W6680096826"],"related_works":["https://openalex.org/W2772917594","https://openalex.org/W2036807459","https://openalex.org/W2058170566","https://openalex.org/W2755342338","https://openalex.org/W2166024367","https://openalex.org/W3116076068","https://openalex.org/W2229312674","https://openalex.org/W2951359407","https://openalex.org/W2079911747","https://openalex.org/W1969923398"],"abstract_inverted_index":{"The":[0,89,116,130],"Gleason":[1,21],"grading":[2],"system,":[3],"applied":[4],"to":[5,60,104],"histopathology":[6],"images,":[7],"serves":[8],"as":[9],"the":[10,127,134,137],"most":[11],"significant":[12],"prognostic":[13],"marker":[14],"for":[15,77],"Prostate":[16],"cancer":[17],"(PCa).":[18],"Pathologists":[19],"evaluate":[20],"grades":[22],"by":[23,50],"analyzing":[24],"tumor":[25,68],"structural":[26],"growth":[27],"patterns":[28],"from":[29],"whole":[30],"slide":[31],"images":[32],"(WSIs)":[33],"of":[34,86,124,136],"tissue":[35],"specimens.":[36],"However,":[37],"this":[38],"is":[39,57],"time":[40],"consuming":[41],"process":[42],"and":[43,66,109],"introduces":[44],"an":[45,73,120],"inherent":[46],"subjectivity":[47],"when":[48],"evaluated":[49],"different":[51],"pathologists.":[52],"PCa":[53],"segmentation":[54],"in":[55,84,126],"WSIs":[56,85],"challenging":[58],"due":[59],"subtle":[61,106],"malignant":[62],"patterns,":[63],"gigapixel":[64],"image,":[65],"heterogeneous":[67],"patterns.":[69],"This":[70],"paper":[71],"proposes":[72],"attention-enhanced":[74],"UNet":[75],"architecture":[76],"segmenting":[78],"cancerous":[79],"(Gleason":[80],"score":[81,123],"3)":[82],"regions":[83],"prostate":[87],"gland.":[88],"proposed":[90,117,138],"method":[91],"combines":[92],"attention":[93],"gates":[94],"with":[95],"subsequent":[96],"dropout":[97],"regularization":[98],"at":[99],"skip":[100],"connections,":[101],"specifically":[102],"designed":[103],"handle":[105],"glandular":[107],"malignancies":[108],"maintain":[110],"consistent":[111],"feature":[112],"extraction":[113],"across":[114],"WSIs.":[115],"model":[118,139],"achieves":[119],"average":[121],"Dice":[122],"0.8208":[125],"validation":[128],"dataset.":[129],"experimental":[131],"results":[132],"demonstrates":[133],"superiority":[135],"over":[140],"other":[141],"UNet-based":[142],"models.":[143]},"counts_by_year":[],"updated_date":"2026-04-17T18:11:37.981687","created_date":"2025-10-10T00:00:00"}
