{"id":"https://openalex.org/W4401750460","doi":"https://doi.org/10.1109/isbi56570.2024.10635784","title":"Automated Visceral and Subcutaneous Fat Segmentation in Computed Tomography","display_name":"Automated Visceral and Subcutaneous Fat Segmentation in Computed Tomography","publication_year":2024,"publication_date":"2024-05-27","ids":{"openalex":"https://openalex.org/W4401750460","doi":"https://doi.org/10.1109/isbi56570.2024.10635784"},"language":"en","primary_location":{"id":"doi:10.1109/isbi56570.2024.10635784","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/isbi56570.2024.10635784","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 IEEE International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://repositorio-aberto.up.pt/bitstream/10216/153829/3/647735.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5062914904","display_name":"Rui Castro","orcid":"https://orcid.org/0000-0002-3769-7660"},"institutions":[{"id":"https://openalex.org/I182534213","display_name":"Universidade do Porto","ror":"https://ror.org/043pwc612","country_code":"PT","type":"education","lineage":["https://openalex.org/I182534213"]}],"countries":["PT"],"is_corresponding":true,"raw_author_name":"Rui Castro","raw_affiliation_strings":["Faculty of Engineering of the University of Porto (FEUP),Porto,Portugal"],"affiliations":[{"raw_affiliation_string":"Faculty of Engineering of the University of Porto (FEUP),Porto,Portugal","institution_ids":["https://openalex.org/I182534213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028719572","display_name":"In\u00eas Sousa","orcid":"https://orcid.org/0000-0002-8488-256X"},"institutions":[{"id":"https://openalex.org/I182534213","display_name":"Universidade do Porto","ror":"https://ror.org/043pwc612","country_code":"PT","type":"education","lineage":["https://openalex.org/I182534213"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"In\u00eas Sousa","raw_affiliation_strings":["Faculty of Medicine of the University of Porto (FMUP),Porto,Portugal"],"affiliations":[{"raw_affiliation_string":"Faculty of Medicine of the University of Porto (FMUP),Porto,Portugal","institution_ids":["https://openalex.org/I182534213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034359893","display_name":"F\u00e1bio Sousa\u2010Nunes","orcid":"https://orcid.org/0000-0002-0363-4805"},"institutions":[{"id":"https://openalex.org/I182534213","display_name":"Universidade do Porto","ror":"https://ror.org/043pwc612","country_code":"PT","type":"education","lineage":["https://openalex.org/I182534213"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"F\u00e1bio Nunes","raw_affiliation_strings":["Faculty of Medicine of the University of Porto (FMUP),Porto,Portugal"],"affiliations":[{"raw_affiliation_string":"Faculty of Medicine of the University of Porto (FMUP),Porto,Portugal","institution_ids":["https://openalex.org/I182534213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089155218","display_name":"Jennifer M\u00e2ncio","orcid":"https://orcid.org/0000-0003-0814-6672"},"institutions":[{"id":"https://openalex.org/I182534213","display_name":"Universidade do Porto","ror":"https://ror.org/043pwc612","country_code":"PT","type":"education","lineage":["https://openalex.org/I182534213"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Jennifer Mancio","raw_affiliation_strings":["Faculty of Medicine of the University of Porto (FMUP),Porto,Portugal"],"affiliations":[{"raw_affiliation_string":"Faculty of Medicine of the University of Porto (FMUP),Porto,Portugal","institution_ids":["https://openalex.org/I182534213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019030595","display_name":"Ricardo Fontes\u2010Carvalho","orcid":"https://orcid.org/0000-0003-2306-8393"},"institutions":[{"id":"https://openalex.org/I182534213","display_name":"Universidade do Porto","ror":"https://ror.org/043pwc612","country_code":"PT","type":"education","lineage":["https://openalex.org/I182534213"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Ricardo Fontes-Carvalho","raw_affiliation_strings":["Faculty of Medicine of the University of Porto (FMUP),Porto,Portugal"],"affiliations":[{"raw_affiliation_string":"Faculty of Medicine of the University of Porto (FMUP),Porto,Portugal","institution_ids":["https://openalex.org/I182534213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087199549","display_name":"Carlos Gil Ferreira","orcid":"https://orcid.org/0000-0002-7228-7018"},"institutions":[{"id":"https://openalex.org/I182534213","display_name":"Universidade do Porto","ror":"https://ror.org/043pwc612","country_code":"PT","type":"education","lineage":["https://openalex.org/I182534213"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Carlos Ferreira","raw_affiliation_strings":["Faculty of Engineering of the University of Porto (FEUP),Porto,Portugal"],"affiliations":[{"raw_affiliation_string":"Faculty of Engineering of the University of Porto (FEUP),Porto,Portugal","institution_ids":["https://openalex.org/I182534213"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5006130956","display_name":"Jo\u00e3o Pedrosa","orcid":"https://orcid.org/0000-0002-7588-8927"},"institutions":[{"id":"https://openalex.org/I182534213","display_name":"Universidade do Porto","ror":"https://ror.org/043pwc612","country_code":"PT","type":"education","lineage":["https://openalex.org/I182534213"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Jo\u00e3o Pedrosa","raw_affiliation_strings":["Faculty of Engineering of the University of Porto (FEUP),Porto,Portugal"],"affiliations":[{"raw_affiliation_string":"Faculty of Engineering of the University of Porto (FEUP),Porto,Portugal","institution_ids":["https://openalex.org/I182534213"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5062914904"],"corresponding_institution_ids":["https://openalex.org/I182534213"],"apc_list":null,"apc_paid":null,"fwci":0.3953,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.63892556,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"5"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9824000000953674,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9824000000953674,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12979","display_name":"Cardiovascular Disease and Adiposity","score":0.9822999835014343,"subfield":{"id":"https://openalex.org/subfields/2705","display_name":"Cardiology and Cardiovascular Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11861","display_name":"Thermal Regulation in Medicine","score":0.9434999823570251,"subfield":{"id":"https://openalex.org/subfields/2706","display_name":"Critical Care and Intensive Care Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computed-tomography","display_name":"Computed tomography","score":0.777016282081604},{"id":"https://openalex.org/keywords/subcutaneous-fat","display_name":"Subcutaneous fat","score":0.7358275651931763},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.6580066680908203},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.5439427495002747},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.487169474363327},{"id":"https://openalex.org/keywords/tomography","display_name":"Tomography","score":0.4357209801673889},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.38725781440734863},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.37612059712409973},{"id":"https://openalex.org/keywords/radiology","display_name":"Radiology","score":0.3427872061729431},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3020089864730835},{"id":"https://openalex.org/keywords/adipose-tissue","display_name":"Adipose tissue","score":0.2435617744922638},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.08913722634315491}],"concepts":[{"id":"https://openalex.org/C544519230","wikidata":"https://www.wikidata.org/wiki/Q32566","display_name":"Computed tomography","level":2,"score":0.777016282081604},{"id":"https://openalex.org/C3018861615","wikidata":"https://www.wikidata.org/wiki/Q1164665","display_name":"Subcutaneous fat","level":3,"score":0.7358275651931763},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.6580066680908203},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.5439427495002747},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.487169474363327},{"id":"https://openalex.org/C163716698","wikidata":"https://www.wikidata.org/wiki/Q841267","display_name":"Tomography","level":2,"score":0.4357209801673889},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.38725781440734863},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.37612059712409973},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.3427872061729431},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3020089864730835},{"id":"https://openalex.org/C171089720","wikidata":"https://www.wikidata.org/wiki/Q193583","display_name":"Adipose tissue","level":2,"score":0.2435617744922638},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.08913722634315491}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/isbi56570.2024.10635784","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/isbi56570.2024.10635784","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 IEEE International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"},{"id":"pmh:oai:repositorio-aberto.up.pt:10216/153829","is_oa":true,"landing_page_url":"https://hdl.handle.net/10216/153829","pdf_url":"https://repositorio-aberto.up.pt/bitstream/10216/153829/3/647735.pdf","source":{"id":"https://openalex.org/S4306401934","display_name":"Open Repository of the University of Porto (University of Porto)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I182534213","host_organization_name":"Universidade do Porto","host_organization_lineage":["https://openalex.org/I182534213"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"master thesis"},{"id":"doi:10.34626/pec2-re90","is_oa":true,"landing_page_url":"https://doi.org/10.34626/pec2-re90","pdf_url":null,"source":{"id":"https://openalex.org/S7407051329","display_name":"Universidade do Porto","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"thesis"}],"best_oa_location":{"id":"pmh:oai:repositorio-aberto.up.pt:10216/153829","is_oa":true,"landing_page_url":"https://hdl.handle.net/10216/153829","pdf_url":"https://repositorio-aberto.up.pt/bitstream/10216/153829/3/647735.pdf","source":{"id":"https://openalex.org/S4306401934","display_name":"Open Repository of the University of Porto (University of Porto)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I182534213","host_organization_name":"Universidade do Porto","host_organization_lineage":["https://openalex.org/I182534213"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"master thesis"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","score":0.8100000023841858,"display_name":"Zero hunger"}],"awards":[{"id":"https://openalex.org/G3244141788","display_name":null,"funder_award_id":"50014","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G3272457656","display_name":null,"funder_award_id":"UIDB/","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G4528900011","display_name":null,"funder_award_id":"UIDB/50014/2020","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G6105681291","display_name":null,"funder_award_id":"LA/P/0063/2020","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G8436637332","display_name":null,"funder_award_id":"LA/P/","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"}],"funders":[{"id":"https://openalex.org/F4320334779","display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia","ror":"https://ror.org/00snfqn58"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4401750460.pdf","grobid_xml":"https://content.openalex.org/works/W4401750460.grobid-xml"},"referenced_works_count":13,"referenced_works":["https://openalex.org/W1901129140","https://openalex.org/W1972242298","https://openalex.org/W2051474907","https://openalex.org/W2056139721","https://openalex.org/W2096528998","https://openalex.org/W2271557391","https://openalex.org/W2624103669","https://openalex.org/W2905023912","https://openalex.org/W3047289734","https://openalex.org/W3083279044","https://openalex.org/W3088911383","https://openalex.org/W3183184377","https://openalex.org/W4210242902"],"related_works":["https://openalex.org/W4379231730","https://openalex.org/W2971114829","https://openalex.org/W4389858081","https://openalex.org/W4256308080","https://openalex.org/W1539264022","https://openalex.org/W2391877111","https://openalex.org/W2501551404","https://openalex.org/W4385583601","https://openalex.org/W4298131179","https://openalex.org/W1522196789"],"abstract_inverted_index":{"Cardiovascular":[0],"diseases":[1],"are":[2,11,174],"the":[3,28,37,55,72,88,101,130,142,148,158,183,185,199,204],"leading":[4],"causes":[5],"of":[6,14,32,42,58,74,90,103,123,168,182,203],"death":[7],"worldwide.":[8],"While":[9],"there":[10],"a":[12,22,62,79,91,152],"number":[13],"cardiovascular":[15,25],"risk":[16,26],"indicators,":[17],"recent":[18],"studies":[19],"have":[20],"found":[21],"connection":[23],"between":[24],"and":[27,30,81,108,121,160,170,201],"accumulation":[29],"characteristics":[31],"visceral":[33,43,107,159],"adipose":[34,44,110,162],"tissue":[35,45,111,163],"in":[36,50,189],"ventral":[38,96,143],"cavity.":[39],"The":[40],"quantification":[41],"can":[46],"be":[47],"easily":[48],"performed":[49],"computed":[51],"tomography":[52],"scans":[53],"but":[54],"manual":[56],"delineation":[57],"these":[59,175,196],"structures":[60],"is":[61],"time":[63],"consuming":[64],"process":[65],"subject":[66],"to":[67,77,94,128,134,180,195],"variability.":[68],"This":[69,85],"has":[70],"motivated":[71],"development":[73],"automatic":[75],"tools":[76],"achieve":[78,164],"faster":[80],"more":[82],"precise":[83],"solution.":[84],"paper":[86],"explores":[87],"use":[89,102],"U-Net":[92],"architecture":[93],"perform":[95],"cavity":[97,144],"segmentation":[98,145],"followed":[99],"by":[100],"threshold-based":[104],"approaches":[105],"for":[106],"subcutaneous":[109,161],"segmentation.":[112,206],"Experiments":[113],"with":[114,147],"different":[115],"learning":[116],"rates,":[117],"input":[118],"image":[119],"sizes":[120],"types":[122],"loss":[124],"functions":[125],"were":[126],"employed":[127],"assess":[129],"hyperparameters":[131],"most":[132],"suited":[133],"this":[135,190],"problem.":[136],"In":[137],"an":[138],"external":[139,191],"test":[140],"set,":[141],"model":[146],"best":[149],"performance":[150],"achieved":[151],"0.967":[153],"Dice":[154,165],"Score":[155,166],"Coefficient,":[156],"while":[157],"Coefficients":[167],"0.986":[169],"0.995.":[171],"Not":[172],"only":[173],"competitive":[176],"results":[177,197],"when":[178],"compared":[179],"state":[181],"art,":[184],"interobserver":[186],"variability":[187],"measured":[188],"dataset":[192],"was":[193],"similar":[194],"confirming":[198],"robustness":[200],"reliability":[202],"proposed":[205]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
