{"id":"https://openalex.org/W4401750089","doi":"https://doi.org/10.1109/isbi56570.2024.10635318","title":"Improving Vertebrae Segmentation Using a Centroid Detection-Guided Transformer-Based Network","display_name":"Improving Vertebrae Segmentation Using a Centroid Detection-Guided Transformer-Based Network","publication_year":2024,"publication_date":"2024-05-27","ids":{"openalex":"https://openalex.org/W4401750089","doi":"https://doi.org/10.1109/isbi56570.2024.10635318"},"language":"en","primary_location":{"id":"doi:10.1109/isbi56570.2024.10635318","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/isbi56570.2024.10635318","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 IEEE International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://discovery.ucl.ac.uk/10193861/1/ISBI24_paper_1223.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5106638243","display_name":"Sevde Aydodgu","orcid":null},"institutions":[{"id":"https://openalex.org/I4210122016","display_name":"Wellcome / EPSRC Centre for Interventional and Surgical Sciences","ror":"https://ror.org/03r42r570","country_code":"GB","type":"facility","lineage":["https://openalex.org/I124357947","https://openalex.org/I1299528221","https://openalex.org/I4210087105","https://openalex.org/I4210122016","https://openalex.org/I45129253","https://openalex.org/I87048295"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Sevde Aydodgu","raw_affiliation_strings":["Wellcome/EPSRC Centre for Interventional and Surgical Sciences,Department of Medical Physics and Biomedical Engineering"],"affiliations":[{"raw_affiliation_string":"Wellcome/EPSRC Centre for Interventional and Surgical Sciences,Department of Medical Physics and Biomedical Engineering","institution_ids":["https://openalex.org/I4210122016"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016337017","display_name":"Ka-Wai Yung","orcid":"https://orcid.org/0009-0007-0048-3179"},"institutions":[{"id":"https://openalex.org/I4210122016","display_name":"Wellcome / EPSRC Centre for Interventional and Surgical Sciences","ror":"https://ror.org/03r42r570","country_code":"GB","type":"facility","lineage":["https://openalex.org/I124357947","https://openalex.org/I1299528221","https://openalex.org/I4210087105","https://openalex.org/I4210122016","https://openalex.org/I45129253","https://openalex.org/I87048295"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Ka-Wai Yung","raw_affiliation_strings":["Wellcome/EPSRC Centre for Interventional and Surgical Sciences,Department of Medical Physics and Biomedical Engineering"],"affiliations":[{"raw_affiliation_string":"Wellcome/EPSRC Centre for Interventional and Surgical Sciences,Department of Medical Physics and Biomedical Engineering","institution_ids":["https://openalex.org/I4210122016"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077630267","display_name":"Danail Stoyanov","orcid":"https://orcid.org/0000-0002-0980-3227"},"institutions":[{"id":"https://openalex.org/I4210122016","display_name":"Wellcome / EPSRC Centre for Interventional and Surgical Sciences","ror":"https://ror.org/03r42r570","country_code":"GB","type":"facility","lineage":["https://openalex.org/I124357947","https://openalex.org/I1299528221","https://openalex.org/I4210087105","https://openalex.org/I4210122016","https://openalex.org/I45129253","https://openalex.org/I87048295"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Danail Stoyanov","raw_affiliation_strings":["Wellcome/EPSRC Centre for Interventional and Surgical Sciences,Department of Medical Physics and Biomedical Engineering"],"affiliations":[{"raw_affiliation_string":"Wellcome/EPSRC Centre for Interventional and Surgical Sciences,Department of Medical Physics and Biomedical Engineering","institution_ids":["https://openalex.org/I4210122016"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089710103","display_name":"Deepak M. Kalaskar","orcid":"https://orcid.org/0000-0002-0576-1816"},"institutions":[{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Deepak Kalaskar","raw_affiliation_strings":["University College London,Division of Surgery and Interventional Science"],"affiliations":[{"raw_affiliation_string":"University College London,Division of Surgery and Interventional Science","institution_ids":["https://openalex.org/I45129253"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5048400975","display_name":"Evangelos B. Mazomenos","orcid":"https://orcid.org/0000-0003-0357-5996"},"institutions":[{"id":"https://openalex.org/I4210122016","display_name":"Wellcome / EPSRC Centre for Interventional and Surgical Sciences","ror":"https://ror.org/03r42r570","country_code":"GB","type":"facility","lineage":["https://openalex.org/I124357947","https://openalex.org/I1299528221","https://openalex.org/I4210087105","https://openalex.org/I4210122016","https://openalex.org/I45129253","https://openalex.org/I87048295"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Evangelos Mazomenos","raw_affiliation_strings":["Wellcome/EPSRC Centre for Interventional and Surgical Sciences,Department of Medical Physics and Biomedical Engineering"],"affiliations":[{"raw_affiliation_string":"Wellcome/EPSRC Centre for Interventional and Surgical Sciences,Department of Medical Physics and Biomedical Engineering","institution_ids":["https://openalex.org/I4210122016"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5106638243"],"corresponding_institution_ids":["https://openalex.org/I4210122016"],"apc_list":null,"apc_paid":null,"fwci":0.1812,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.46486292,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"5"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T14510","display_name":"Medical Imaging and Analysis","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T14510","display_name":"Medical Imaging and Analysis","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11363","display_name":"Dental Radiography and Imaging","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/3504","display_name":"Oral Surgery"},"field":{"id":"https://openalex.org/fields/35","display_name":"Dentistry"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10776","display_name":"Spinal Fractures and Fixation Techniques","score":0.9886999726295471,"subfield":{"id":"https://openalex.org/subfields/2746","display_name":"Surgery"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/centroid","display_name":"Centroid","score":0.7337638139724731},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6488634347915649},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.5893111228942871},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5643913745880127},{"id":"https://openalex.org/keywords/transformer","display_name":"Transformer","score":0.500591516494751},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.449547678232193},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.4145588278770447},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.3659871816635132},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.1538206934928894},{"id":"https://openalex.org/keywords/voltage","display_name":"Voltage","score":0.07274836301803589}],"concepts":[{"id":"https://openalex.org/C146599234","wikidata":"https://www.wikidata.org/wiki/Q511093","display_name":"Centroid","level":2,"score":0.7337638139724731},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6488634347915649},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.5893111228942871},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5643913745880127},{"id":"https://openalex.org/C66322947","wikidata":"https://www.wikidata.org/wiki/Q11658","display_name":"Transformer","level":3,"score":0.500591516494751},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.449547678232193},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.4145588278770447},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.3659871816635132},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.1538206934928894},{"id":"https://openalex.org/C165801399","wikidata":"https://www.wikidata.org/wiki/Q25428","display_name":"Voltage","level":2,"score":0.07274836301803589},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/isbi56570.2024.10635318","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/isbi56570.2024.10635318","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 IEEE International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"},{"id":"pmh:oai:eprints.ucl.ac.uk.OAI2:10193861","is_oa":true,"landing_page_url":"https://discovery.ucl.ac.uk/id/eprint/10193861/","pdf_url":"https://discovery.ucl.ac.uk/10193861/1/ISBI24_paper_1223.pdf","source":{"id":"https://openalex.org/S4306400024","display_name":"UCL Discovery (University College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I45129253","host_organization_name":"University College London","host_organization_lineage":["https://openalex.org/I45129253"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"     In:  2024 IEEE 21st International Symposium on Biomedical Imaging.    IEEE: Athens, Greece. (2024)    (In press).  ","raw_type":"Proceedings paper"}],"best_oa_location":{"id":"pmh:oai:eprints.ucl.ac.uk.OAI2:10193861","is_oa":true,"landing_page_url":"https://discovery.ucl.ac.uk/id/eprint/10193861/","pdf_url":"https://discovery.ucl.ac.uk/10193861/1/ISBI24_paper_1223.pdf","source":{"id":"https://openalex.org/S4306400024","display_name":"UCL Discovery (University College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I45129253","host_organization_name":"University College London","host_organization_lineage":["https://openalex.org/I45129253"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"     In:  2024 IEEE 21st International Symposium on Biomedical Imaging.    IEEE: Athens, Greece. (2024)    (In press).  ","raw_type":"Proceedings paper"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5050768783","display_name":null,"funder_award_id":"EPSRC Centre for In","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320334627","display_name":"Engineering and Physical Sciences Research Council","ror":"https://ror.org/0439y7842"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4401750089.pdf","grobid_xml":"https://content.openalex.org/works/W4401750089.grobid-xml"},"referenced_works_count":18,"referenced_works":["https://openalex.org/W2011996578","https://openalex.org/W2488744541","https://openalex.org/W2901559346","https://openalex.org/W2963598138","https://openalex.org/W2968823755","https://openalex.org/W3011677811","https://openalex.org/W3087644100","https://openalex.org/W3112346810","https://openalex.org/W3120280757","https://openalex.org/W3127751679","https://openalex.org/W3207601934","https://openalex.org/W3210067958","https://openalex.org/W3210377922","https://openalex.org/W3212062421","https://openalex.org/W4377220051","https://openalex.org/W4402915538","https://openalex.org/W6790275670","https://openalex.org/W6851519671"],"related_works":["https://openalex.org/W2381926679","https://openalex.org/W2007009951","https://openalex.org/W2082644203","https://openalex.org/W2350539780","https://openalex.org/W3165040664","https://openalex.org/W3122652148","https://openalex.org/W1583866266","https://openalex.org/W4242386713","https://openalex.org/W2996505764","https://openalex.org/W1522196789"],"abstract_inverted_index":{"Segmentation":[0],"and":[1,12,45,86,110],"identification":[2],"of":[3,59,82,105],"vertebrae":[4,44],"are":[5],"crucial":[6],"tasks":[7,22],"for":[8,71,84,88],"diagnosing":[9],"spinal":[10],"deformities":[11],"treatment":[13],"planning.":[14],"However,":[15],"past":[16],"methods":[17],"have":[18],"often":[19],"treated":[20],"these":[21],"separately,":[23],"neglecting":[24],"their":[25],"inherent":[26],"relationship.":[27],"This":[28],"paper":[29],"proposes":[30],"a":[31,53,79,103,113],"single-stage":[32],"2D":[33,72],"centroid-detection":[34],"guidance":[35],"segmentation":[36,58,69],"network":[37],"(CD-VerTransUNet)":[38],"that":[39],"utilizes":[40],"global":[41],"information":[42],"between":[43,48],"the":[46,49,57,75,108],"relationship":[47],"two":[50],"tasks.":[51],"Moreover,":[52],"resampler":[54],"module":[55],"enhances":[56],"rare":[60],"(e.g.":[61],"T13/L6)":[62],"vertebrae.":[63],"The":[64],"proposed":[65],"model":[66],"demonstrates":[67],"state-of-the-art":[68],"performance":[70,98],"models":[73],"on":[74,107,112],"VerSe\u201920":[76,109],"dataset,":[77],"achieving":[78],"dice-coefficient":[80],"(DSC)":[81],"75.15%":[83],"sagittal":[85],"71.16%":[87],"coronal":[89],"plane.":[90],"Our":[91],"novel":[92],"multitasking":[93],"approach":[94],"even":[95],"shows":[96],"comparable":[97],"to":[99],"3D":[100],"architectures,":[101],"yielding":[102],"DSC":[104],"77.02%":[106],"71.75%":[111],"scoliotic":[114],"dataset.":[115]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}