{"id":"https://openalex.org/W4386362583","doi":"https://doi.org/10.1109/isbi53787.2023.10230707","title":"A Deep Learning Framework for Estimating Multi-Fiber PICASO Model Parameters of Tissue Microstructure Using Diffusion MRI","display_name":"A Deep Learning Framework for Estimating Multi-Fiber PICASO Model Parameters of Tissue Microstructure Using Diffusion MRI","publication_year":2023,"publication_date":"2023-04-18","ids":{"openalex":"https://openalex.org/W4386362583","doi":"https://doi.org/10.1109/isbi53787.2023.10230707"},"language":"en","primary_location":{"id":"doi:10.1109/isbi53787.2023.10230707","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/isbi53787.2023.10230707","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5059738712","display_name":"Tengfei Xue","orcid":null},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]},{"id":"https://openalex.org/I129604602","display_name":"University of Sydney","ror":"https://ror.org/0384j8v12","country_code":"AU","type":"education","lineage":["https://openalex.org/I129604602"]}],"countries":["AU","US"],"is_corresponding":true,"raw_author_name":"Tengfei Xue","raw_affiliation_strings":["Brigham and Women&#x2019;s Hospital,Harvard Medical School,USA","School of Computer Science, University of Sydney, Australia"],"affiliations":[{"raw_affiliation_string":"Brigham and Women&#x2019;s Hospital,Harvard Medical School,USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]},{"raw_affiliation_string":"School of Computer Science, University of Sydney, Australia","institution_ids":["https://openalex.org/I129604602"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057803638","display_name":"Hazhar Sufi Karimi","orcid":"https://orcid.org/0000-0001-6320-6872"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hazhar Sufi Karimi","raw_affiliation_strings":["Brigham and Women&#x2019;s Hospital,Harvard Medical School,USA"],"affiliations":[{"raw_affiliation_string":"Brigham and Women&#x2019;s Hospital,Harvard Medical School,USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004217207","display_name":"William Consagra","orcid":"https://orcid.org/0000-0001-5279-3469"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"William Consagra","raw_affiliation_strings":["Brigham and Women&#x2019;s Hospital,Harvard Medical School,USA"],"affiliations":[{"raw_affiliation_string":"Brigham and Women&#x2019;s Hospital,Harvard Medical School,USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100403473","display_name":"Fan Zhang","orcid":"https://orcid.org/0000-0002-5032-6039"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Fan Zhang","raw_affiliation_strings":["Brigham and Women&#x2019;s Hospital,Harvard Medical School,USA"],"affiliations":[{"raw_affiliation_string":"Brigham and Women&#x2019;s Hospital,Harvard Medical School,USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076697411","display_name":"Weidong Cai","orcid":"https://orcid.org/0000-0003-3706-8896"},"institutions":[{"id":"https://openalex.org/I129604602","display_name":"University of Sydney","ror":"https://ror.org/0384j8v12","country_code":"AU","type":"education","lineage":["https://openalex.org/I129604602"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Weidong Cai","raw_affiliation_strings":["University of Sydney,School of Computer Science,Australia","School of Computer Science, University of Sydney, Australia"],"affiliations":[{"raw_affiliation_string":"University of Sydney,School of Computer Science,Australia","institution_ids":["https://openalex.org/I129604602"]},{"raw_affiliation_string":"School of Computer Science, University of Sydney, Australia","institution_ids":["https://openalex.org/I129604602"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082042615","display_name":"Lauren J. O\u2019Donnell","orcid":"https://orcid.org/0000-0003-0197-7801"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lauren J. O\u2019Donnell","raw_affiliation_strings":["Brigham and Women&#x2019;s Hospital,Harvard Medical School,USA"],"affiliations":[{"raw_affiliation_string":"Brigham and Women&#x2019;s Hospital,Harvard Medical School,USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004577779","display_name":"Lipeng Ning","orcid":"https://orcid.org/0000-0003-4992-459X"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lipeng Ning","raw_affiliation_strings":["Brigham and Women&#x2019;s Hospital,Harvard Medical School,USA"],"affiliations":[{"raw_affiliation_string":"Brigham and Women&#x2019;s Hospital,Harvard Medical School,USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5037057278","display_name":"Yogesh Rathi","orcid":"https://orcid.org/0000-0002-9946-2314"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yogesh Rathi","raw_affiliation_strings":["Brigham and Women&#x2019;s Hospital,Harvard Medical School,USA"],"affiliations":[{"raw_affiliation_string":"Brigham and Women&#x2019;s Hospital,Harvard Medical School,USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5059738712"],"corresponding_institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I129604602","https://openalex.org/I136199984"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.28718305,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"219","issue":null,"first_page":"1","last_page":"5"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11304","display_name":"Advanced Neuroimaging Techniques and Applications","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11304","display_name":"Advanced Neuroimaging Techniques and Applications","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10378","display_name":"Advanced MRI Techniques and Applications","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11885","display_name":"MRI in cancer diagnosis","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/diffusion-mri","display_name":"Diffusion MRI","score":0.6638779640197754},{"id":"https://openalex.org/keywords/microstructure","display_name":"Microstructure","score":0.6444458365440369},{"id":"https://openalex.org/keywords/diffusion","display_name":"Diffusion","score":0.6123384237289429},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.518705427646637},{"id":"https://openalex.org/keywords/fiber","display_name":"Fiber","score":0.4938674569129944},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4212016463279724},{"id":"https://openalex.org/keywords/materials-science","display_name":"Materials science","score":0.38493993878364563},{"id":"https://openalex.org/keywords/magnetic-resonance-imaging","display_name":"Magnetic resonance imaging","score":0.2327008843421936},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.13324254751205444},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.1324900984764099},{"id":"https://openalex.org/keywords/composite-material","display_name":"Composite material","score":0.13092777132987976},{"id":"https://openalex.org/keywords/radiology","display_name":"Radiology","score":0.1248999834060669},{"id":"https://openalex.org/keywords/thermodynamics","display_name":"Thermodynamics","score":0.07538443803787231}],"concepts":[{"id":"https://openalex.org/C149550507","wikidata":"https://www.wikidata.org/wiki/Q899360","display_name":"Diffusion MRI","level":3,"score":0.6638779640197754},{"id":"https://openalex.org/C87976508","wikidata":"https://www.wikidata.org/wiki/Q1498213","display_name":"Microstructure","level":2,"score":0.6444458365440369},{"id":"https://openalex.org/C69357855","wikidata":"https://www.wikidata.org/wiki/Q163214","display_name":"Diffusion","level":2,"score":0.6123384237289429},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.518705427646637},{"id":"https://openalex.org/C519885992","wikidata":"https://www.wikidata.org/wiki/Q161","display_name":"Fiber","level":2,"score":0.4938674569129944},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4212016463279724},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.38493993878364563},{"id":"https://openalex.org/C143409427","wikidata":"https://www.wikidata.org/wiki/Q161238","display_name":"Magnetic resonance imaging","level":2,"score":0.2327008843421936},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.13324254751205444},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.1324900984764099},{"id":"https://openalex.org/C159985019","wikidata":"https://www.wikidata.org/wiki/Q181790","display_name":"Composite material","level":1,"score":0.13092777132987976},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.1248999834060669},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.07538443803787231}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/isbi53787.2023.10230707","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/isbi53787.2023.10230707","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":29,"referenced_works":["https://openalex.org/W1964802316","https://openalex.org/W1988874269","https://openalex.org/W1988954604","https://openalex.org/W2001611992","https://openalex.org/W2024729467","https://openalex.org/W2032254014","https://openalex.org/W2062791478","https://openalex.org/W2083884149","https://openalex.org/W2116823839","https://openalex.org/W2137679584","https://openalex.org/W2139158372","https://openalex.org/W2163397436","https://openalex.org/W2175900216","https://openalex.org/W2177835590","https://openalex.org/W2194775991","https://openalex.org/W2328247767","https://openalex.org/W2536201238","https://openalex.org/W2782477562","https://openalex.org/W2901826627","https://openalex.org/W2947522031","https://openalex.org/W2952939467","https://openalex.org/W3033099853","https://openalex.org/W3093480384","https://openalex.org/W3156041236","https://openalex.org/W3183581360","https://openalex.org/W4205798776","https://openalex.org/W4210361931","https://openalex.org/W4295747298","https://openalex.org/W4295793612"],"related_works":["https://openalex.org/W2058940780","https://openalex.org/W2090404944","https://openalex.org/W2046332915","https://openalex.org/W2354424856","https://openalex.org/W2375093060","https://openalex.org/W2605776044","https://openalex.org/W2392473810","https://openalex.org/W2803456621","https://openalex.org/W2357211366","https://openalex.org/W3045762471"],"abstract_inverted_index":{"Diffusion":[0],"models":[1],"derived":[2],"from":[3,93],"diffusion":[4,18,58],"magnetic":[5],"resonance":[6],"imaging":[7],"(dMRI)":[8],"can":[9,78],"non-invasively":[10],"probe":[11],"tissue":[12],"microstructural":[13],"features.":[14],"Accurate":[15],"estimation":[16,51,121],"of":[17,52,64,74],"model":[19],"parameters":[20,54],"is":[21,86,100],"important":[22],"for":[23,50,55],"understanding":[24],"the":[25,103],"brain\u2019s":[26],"white":[27],"matter,":[28],"but":[29],"commonly":[30],"used":[31],"nonlinear":[32,113],"parameter":[33,91,120],"fitting":[34],"methods":[35,114],"are":[36,96],"less":[37],"accurate":[38,90],"and":[39,62,77,105,123],"extremely":[40],"slow.":[41],"We":[42],"propose":[43],"an":[44,56],"effective":[45],"deep":[46],"learning":[47],"framework":[48,99,110],"(Deep-PICASO)":[49],"multi-fiber":[53],"advanced":[57],"model,":[59],"precise":[60],"inference":[61],"characterization":[63],"structural":[65],"organization":[66],"(PICASO).":[67],"Deep-PICASO":[68],"leverages":[69],"a":[70,116],"novel":[71],"image":[72],"representation":[73],"dMRI":[75,83],"signal":[76],"be":[79],"trained":[80],"using":[81],"synthetic":[82,104],"data.":[84],"This":[85],"quite":[87],"advantageous":[88],"as":[89],"estimates":[92],"real":[94,107],"data":[95],"unavailable.":[97],"The":[98],"tested":[101],"on":[102,119],"in-vivo":[106],"datasets.":[108],"Our":[109],"outperforms":[111],"comparable":[112],"by":[115],"large":[117],"margin":[118],"tasks,":[122],"runs":[124],"significantly":[125],"faster":[126],"than":[127],"existing":[128],"methods.":[129]},"counts_by_year":[],"updated_date":"2025-12-21T23:12:01.093139","created_date":"2025-10-10T00:00:00"}
