{"id":"https://openalex.org/W4386362810","doi":"https://doi.org/10.1109/isbi53787.2023.10230394","title":"Probing Intracellular Elasticity with Minimal-Hessian Registration","display_name":"Probing Intracellular Elasticity with Minimal-Hessian Registration","publication_year":2023,"publication_date":"2023-04-18","ids":{"openalex":"https://openalex.org/W4386362810","doi":"https://doi.org/10.1109/isbi53787.2023.10230394"},"language":"en","primary_location":{"id":"doi:10.1109/isbi53787.2023.10230394","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/isbi53787.2023.10230394","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://infoscience.epfl.ch/handle/20.500.14299/203791","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5000213101","display_name":"Yekta Kesenci","orcid":null},"institutions":[{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"funder","lineage":["https://openalex.org/I157536573"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Yekta Kesenci","raw_affiliation_strings":["Universit&#x00E9; Paris Cit&#x00E9;,Institut Pasteur,Paris,France,F-75015"],"affiliations":[{"raw_affiliation_string":"Universit&#x00E9; Paris Cit&#x00E9;,Institut Pasteur,Paris,France,F-75015","institution_ids":["https://openalex.org/I157536573"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006812754","display_name":"Aleix Boquet-Pujadas","orcid":"https://orcid.org/0000-0002-3300-8004"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Aleix Boquet-Pujadas","raw_affiliation_strings":["&#x00C9;cole Polytechnique F&#x00E9;d&#x00E9;rale Lausanne (EPFL),Biomedical Imaging Group,Lausanne,Switzerland"],"affiliations":[{"raw_affiliation_string":"&#x00C9;cole Polytechnique F&#x00E9;d&#x00E9;rale Lausanne (EPFL),Biomedical Imaging Group,Lausanne,Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027830035","display_name":"Micha\u00ebl Unser","orcid":"https://orcid.org/0000-0003-1248-2513"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Michael Unser","raw_affiliation_strings":["&#x00C9;cole Polytechnique F&#x00E9;d&#x00E9;rale Lausanne (EPFL),Biomedical Imaging Group,Lausanne,Switzerland"],"affiliations":[{"raw_affiliation_string":"&#x00C9;cole Polytechnique F&#x00E9;d&#x00E9;rale Lausanne (EPFL),Biomedical Imaging Group,Lausanne,Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5003562216","display_name":"Jean\u2010Christophe Olivo\u2010Mar\u00edn","orcid":"https://orcid.org/0000-0001-6796-0696"},"institutions":[{"id":"https://openalex.org/I157536573","display_name":"Institut Pasteur","ror":"https://ror.org/0495fxg12","country_code":"FR","type":"funder","lineage":["https://openalex.org/I157536573"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jean-Christophe Olivo-Marin","raw_affiliation_strings":["Universit&#x00E9; Paris Cit&#x00E9;,Institut Pasteur,Paris,France,F-75015"],"affiliations":[{"raw_affiliation_string":"Universit&#x00E9; Paris Cit&#x00E9;,Institut Pasteur,Paris,France,F-75015","institution_ids":["https://openalex.org/I157536573"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5000213101"],"corresponding_institution_ids":["https://openalex.org/I157536573"],"apc_list":null,"apc_paid":null,"fwci":0.2162,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.58267879,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"5"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10379","display_name":"Cellular Mechanics and Interactions","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10379","display_name":"Cellular Mechanics and Interactions","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11366","display_name":"Elasticity and Material Modeling","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9882000088691711,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/hessian-matrix","display_name":"Hessian matrix","score":0.7763753533363342},{"id":"https://openalex.org/keywords/elasticity","display_name":"Elasticity (physics)","score":0.6977368593215942},{"id":"https://openalex.org/keywords/intracellular","display_name":"Intracellular","score":0.427718847990036},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.36801081895828247},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.3143974542617798},{"id":"https://openalex.org/keywords/materials-science","display_name":"Materials science","score":0.180355042219162},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.148384690284729},{"id":"https://openalex.org/keywords/applied-mathematics","display_name":"Applied mathematics","score":0.14793825149536133},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.12091481685638428},{"id":"https://openalex.org/keywords/composite-material","display_name":"Composite material","score":0.09532827138900757}],"concepts":[{"id":"https://openalex.org/C203616005","wikidata":"https://www.wikidata.org/wiki/Q620495","display_name":"Hessian matrix","level":2,"score":0.7763753533363342},{"id":"https://openalex.org/C121854251","wikidata":"https://www.wikidata.org/wiki/Q62932","display_name":"Elasticity (physics)","level":2,"score":0.6977368593215942},{"id":"https://openalex.org/C79879829","wikidata":"https://www.wikidata.org/wiki/Q5571762","display_name":"Intracellular","level":2,"score":0.427718847990036},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.36801081895828247},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.3143974542617798},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.180355042219162},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.148384690284729},{"id":"https://openalex.org/C28826006","wikidata":"https://www.wikidata.org/wiki/Q33521","display_name":"Applied mathematics","level":1,"score":0.14793825149536133},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.12091481685638428},{"id":"https://openalex.org/C159985019","wikidata":"https://www.wikidata.org/wiki/Q181790","display_name":"Composite material","level":1,"score":0.09532827138900757}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/isbi53787.2023.10230394","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/isbi53787.2023.10230394","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"},{"id":"pmh:oai:infoscience.epfl.ch:307823","is_oa":true,"landing_page_url":"https://infoscience.epfl.ch/handle/20.500.14299/203791","pdf_url":null,"source":{"id":"https://openalex.org/S4306400487","display_name":"Infoscience (Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"WoS","raw_type":"conference proceedings"}],"best_oa_location":{"id":"pmh:oai:infoscience.epfl.ch:307823","is_oa":true,"landing_page_url":"https://infoscience.epfl.ch/handle/20.500.14299/203791","pdf_url":null,"source":{"id":"https://openalex.org/S4306400487","display_name":"Infoscience (Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"WoS","raw_type":"conference proceedings"},"sustainable_development_goals":[{"display_name":"Sustainable cities and communities","score":0.5799999833106995,"id":"https://metadata.un.org/sdg/11"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320322364","display_name":"Labex","ror":"https://ror.org/01cvsyf94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":24,"referenced_works":["https://openalex.org/W1578285471","https://openalex.org/W1625630534","https://openalex.org/W1973343064","https://openalex.org/W2007397190","https://openalex.org/W2007454648","https://openalex.org/W2039731429","https://openalex.org/W2060051030","https://openalex.org/W2096621047","https://openalex.org/W2114774620","https://openalex.org/W2117541425","https://openalex.org/W2121713565","https://openalex.org/W2126796349","https://openalex.org/W2131747574","https://openalex.org/W2142224912","https://openalex.org/W2595709438","https://openalex.org/W2783086318","https://openalex.org/W2900498781","https://openalex.org/W2951706529","https://openalex.org/W3015166236","https://openalex.org/W3118977549","https://openalex.org/W3122130668","https://openalex.org/W3214504485","https://openalex.org/W4293678183","https://openalex.org/W4307038210"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W4391375266","https://openalex.org/W2611031068","https://openalex.org/W1704347466","https://openalex.org/W4283017538","https://openalex.org/W1996936972","https://openalex.org/W1545275724","https://openalex.org/W2802707792","https://openalex.org/W2569979269","https://openalex.org/W2075777916"],"abstract_inverted_index":{"We":[0,123],"propose":[1],"an":[2],"image-based":[3],"elastography":[4],"method":[5,126],"to":[6,64,72,106,120],"measure":[7],"the":[8,43,78,86,133],"heterogeneous":[9],"stiffness":[10],"inside":[11],"a":[12,19,34,51,57],"cell":[13],"and":[14,100,117,129],"its":[15],"nucleus.":[16],"It":[17,103],"uses":[18],"widely":[20],"accessible":[21],"setup":[22],"consisting":[23],"of":[24,37,42,112],"plate":[25],"compression":[26],"imaged":[27],"with":[28,50,108],"fluorescence":[29],"microscopy.":[30],"Our":[31,90],"framework":[32],"recovers":[33],"spatial":[35],"map":[36],"Young\u2019s":[38],"modulus":[39,80],"from":[40],"images":[41],"intracellular":[44],"displacements.":[45],"These":[46],"displacements":[47,67],"are":[48],"measured":[49],"novel":[52],"optical-flow":[53],"technique":[54],"characterised":[55],"by":[56],"Hessian-Schatten":[58],"norm":[59],"regularizer.":[60],"The":[61],"aim":[62],"is":[63,81,84,93,104,127],"favor":[65],"piecewise-linear":[66],"because":[68],"they":[69],"reproduce":[70],"solutions":[71],"linear":[73],"elasticity":[74],"problems":[75],"well":[76],"when":[77],"underlying":[79],"piecewise-constant,":[82],"as":[83],"often":[85],"case":[87],"in":[88],"cells.":[89],"computational":[91],"approach":[92],"fast":[94],"enough":[95],"for":[96],"long":[97],"time-lapse":[98],"acquisitions":[99],"3D":[101],"imaging.":[102],"able":[105],"cope":[107],"two":[109],"common":[110],"pitfalls":[111],"biological":[113],"elastography:":[114],"high":[115],"compressibility":[116],"small":[118],"compressions":[119],"avoid":[121],"damage.":[122],"show":[124],"our":[125],"faster":[128],"more":[130],"accurate":[131],"than":[132],"state-of-the-art.":[134]},"counts_by_year":[{"year":2024,"cited_by_count":1}],"updated_date":"2025-12-21T01:58:51.020947","created_date":"2025-10-10T00:00:00"}
