{"id":"https://openalex.org/W4225002404","doi":"https://doi.org/10.1109/isbi52829.2022.9761468","title":"Coordinate Transformer Network for Prediction of Pseudomonas Aeruginosa\u2019s Drug Resistance","display_name":"Coordinate Transformer Network for Prediction of Pseudomonas Aeruginosa\u2019s Drug Resistance","publication_year":2022,"publication_date":"2022-03-28","ids":{"openalex":"https://openalex.org/W4225002404","doi":"https://doi.org/10.1109/isbi52829.2022.9761468"},"language":"en","primary_location":{"id":"doi:10.1109/isbi52829.2022.9761468","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi52829.2022.9761468","pdf_url":null,"source":{"id":"https://openalex.org/S4363605129","display_name":"2022 IEEE 19th International Symposium on Biomedical Imaging (ISBI)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 IEEE 19th International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100672809","display_name":"Wei Xiong","orcid":"https://orcid.org/0000-0003-1635-8173"},"institutions":[{"id":"https://openalex.org/I4210145292","display_name":"Shenzhen University Health Science Center","ror":"https://ror.org/04yjbr930","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210145292"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wei Xiong","raw_affiliation_strings":["Shenzhen University,National-Regional Key Technology Engineering Laboratory for MedicalUltrasound, Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Health Science Center,Shenzhen,China,518060"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shenzhen University,National-Regional Key Technology Engineering Laboratory for MedicalUltrasound, Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Health Science Center,Shenzhen,China,518060","institution_ids":["https://openalex.org/I4210145292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004841930","display_name":"Kai\u2010Wei Yu","orcid":"https://orcid.org/0000-0001-7650-3278"},"institutions":[{"id":"https://openalex.org/I3045169105","display_name":"Southern University of Science and Technology","ror":"https://ror.org/049tv2d57","country_code":"CN","type":"education","lineage":["https://openalex.org/I3045169105"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kaiwei Yu","raw_affiliation_strings":["Southern University of Science and Technology,School of Medicine,Shenzhen,China,518055"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Southern University of Science and Technology,School of Medicine,Shenzhen,China,518055","institution_ids":["https://openalex.org/I3045169105"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109437861","display_name":"Yuming Cai","orcid":null},"institutions":[{"id":"https://openalex.org/I3045169105","display_name":"Southern University of Science and Technology","ror":"https://ror.org/049tv2d57","country_code":"CN","type":"education","lineage":["https://openalex.org/I3045169105"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuming Cai","raw_affiliation_strings":["Southern University of Science and Technology,School of Medicine,Shenzhen,China,518055"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Southern University of Science and Technology,School of Medicine,Shenzhen,China,518055","institution_ids":["https://openalex.org/I3045169105"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046260430","display_name":"Liang Yang","orcid":"https://orcid.org/0000-0001-6713-1310"},"institutions":[{"id":"https://openalex.org/I3045169105","display_name":"Southern University of Science and Technology","ror":"https://ror.org/049tv2d57","country_code":"CN","type":"education","lineage":["https://openalex.org/I3045169105"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Liang Yang","raw_affiliation_strings":["Southern University of Science and Technology,School of Medicine,Shenzhen,China,518055"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Southern University of Science and Technology,School of Medicine,Shenzhen,China,518055","institution_ids":["https://openalex.org/I3045169105"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5001212991","display_name":"Baiying Lei","orcid":"https://orcid.org/0000-0002-3087-2550"},"institutions":[{"id":"https://openalex.org/I4210145292","display_name":"Shenzhen University Health Science Center","ror":"https://ror.org/04yjbr930","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210145292"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Baiying Lei","raw_affiliation_strings":["Shenzhen University,National-Regional Key Technology Engineering Laboratory for MedicalUltrasound, Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Health Science Center,Shenzhen,China,518060"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shenzhen University,National-Regional Key Technology Engineering Laboratory for MedicalUltrasound, Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Health Science Center,Shenzhen,China,518060","institution_ids":["https://openalex.org/I4210145292"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9911999702453613,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9911999702453613,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10640","display_name":"Spectroscopy and Chemometric Analyses","score":0.9854000210762024,"subfield":{"id":"https://openalex.org/subfields/1602","display_name":"Analytical Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11667","display_name":"Advanced Chemical Sensor Technologies","score":0.9718000292778015,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pseudomonas-aeruginosa","display_name":"Pseudomonas aeruginosa","score":0.6633802056312561},{"id":"https://openalex.org/keywords/transformer","display_name":"Transformer","score":0.5164432525634766},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.47073495388031006},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.1805337369441986},{"id":"https://openalex.org/keywords/electrical-engineering","display_name":"Electrical engineering","score":0.1480202078819275},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1039833128452301},{"id":"https://openalex.org/keywords/voltage","display_name":"Voltage","score":0.06806576251983643}],"concepts":[{"id":"https://openalex.org/C2777637488","wikidata":"https://www.wikidata.org/wiki/Q31856","display_name":"Pseudomonas aeruginosa","level":3,"score":0.6633802056312561},{"id":"https://openalex.org/C66322947","wikidata":"https://www.wikidata.org/wiki/Q11658","display_name":"Transformer","level":3,"score":0.5164432525634766},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.47073495388031006},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.1805337369441986},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.1480202078819275},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1039833128452301},{"id":"https://openalex.org/C165801399","wikidata":"https://www.wikidata.org/wiki/Q25428","display_name":"Voltage","level":2,"score":0.06806576251983643},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/isbi52829.2022.9761468","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi52829.2022.9761468","pdf_url":null,"source":{"id":"https://openalex.org/S4363605129","display_name":"2022 IEEE 19th International Symposium on Biomedical Imaging (ISBI)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 IEEE 19th International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.8399999737739563}],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":19,"referenced_works":["https://openalex.org/W2194775991","https://openalex.org/W2523971282","https://openalex.org/W2549139847","https://openalex.org/W2579318141","https://openalex.org/W2883780447","https://openalex.org/W2963163009","https://openalex.org/W2963446712","https://openalex.org/W2963925437","https://openalex.org/W3016719260","https://openalex.org/W3024693033","https://openalex.org/W3034429256","https://openalex.org/W3094502228","https://openalex.org/W3172345956","https://openalex.org/W3172509117","https://openalex.org/W3177052299","https://openalex.org/W6725739302","https://openalex.org/W6775845032","https://openalex.org/W6784333009","https://openalex.org/W6796750486"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2799529293","https://openalex.org/W406616055","https://openalex.org/W3214394573","https://openalex.org/W3084162811","https://openalex.org/W3093457988","https://openalex.org/W2068174857","https://openalex.org/W4362472892","https://openalex.org/W4251604579"],"abstract_inverted_index":{"Pseudomonas":[0],"aeruginosa":[1],"(PA)":[2],"is":[3,59,137],"a":[4,34,106],"pathogenic":[5],"bacterium":[6],"in":[7,38,139],"hospital":[8],"infections.":[9],"In":[10],"recent":[11],"years,":[12],"due":[13],"to":[14,36,61,112],"the":[15,19,54,75,89,113],"abuse":[16],"of":[17,21,40,43,49,65,97,119],"antibiotics,":[18],"number":[20],"multi-drug":[22,143],"resistant":[23,31,144],"PA":[24,66],"(MDRPA)":[25],"increases":[26],"year":[27],"by":[28],"year.":[29],"These":[30],"pathogens":[32],"pose":[33],"challenge":[35],"clinicians":[37],"terms":[39],"rapid":[41],"detection":[42],"bacterial":[44],"resistance":[45,64],"and":[46,124,142],"rational":[47],"use":[48],"antibiotics.":[50],"To":[51],"address":[52],"it,":[53],"coordinate":[55,78],"transformer":[56],"network":[57,123],"(CTN)":[58],"proposed":[60],"predict":[62],"drug":[63],"from":[67],"fluorescent":[68],"images.":[69],"Specifically,":[70],"we":[71,104],"explore":[72],"ResNeSt-50":[73],"as":[74],"backbone.":[76],"The":[77,126],"attention":[79,86],"(CA)":[80],"embeds":[81],"location":[82],"information":[83],"into":[84],"channel":[85],"so":[87],"that":[88,134],"target":[90],"region":[91],"can":[92],"be":[93],"accurately":[94],"captured.":[95],"Because":[96],"vision":[98],"transformer\u2019s":[99],"impressive":[100],"global":[101],"modeling":[102],"ability,":[103],"incorporate":[105],"hierarchical":[107],"multi-head":[108],"self-attention":[109],"(H-MHSA)":[110],"module":[111],"network,":[114],"which":[115],"take":[116],"both":[117],"advantages":[118],"deep":[120],"convolutional":[121],"neural":[122],"transformer.":[125],"experimental":[127],"results":[128],"on":[129],"our":[130,135],"self-collected":[131],"data":[132],"show":[133],"CTN":[136],"promising":[138],"identifying":[140],"sensitive":[141],"PA.":[145]},"counts_by_year":[],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}