{"id":"https://openalex.org/W3164146942","doi":"https://doi.org/10.1109/isbi48211.2021.9433858","title":"Unequivocal Cardiac Phase Sorting From Alternating Ramp-And Pulse-Illuminated Microscopy Image Sequences","display_name":"Unequivocal Cardiac Phase Sorting From Alternating Ramp-And Pulse-Illuminated Microscopy Image Sequences","publication_year":2021,"publication_date":"2021-04-13","ids":{"openalex":"https://openalex.org/W3164146942","doi":"https://doi.org/10.1109/isbi48211.2021.9433858","mag":"3164146942"},"language":"en","primary_location":{"id":"doi:10.1109/isbi48211.2021.9433858","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi48211.2021.9433858","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 IEEE 18th International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://orbi.umons.ac.be/bitstream/20.500.12907/54510/1/Mariani_ISBI21_2021.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5068174400","display_name":"Olivia Mariani","orcid":"https://orcid.org/0000-0002-7250-7121"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]},{"id":"https://openalex.org/I7495430","display_name":"Idiap Research Institute","ror":"https://ror.org/05932h694","country_code":"CH","type":"facility","lineage":["https://openalex.org/I7495430"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Olivia Mariani","raw_affiliation_strings":["Idiap Research Institute, Martigny, Switzerland","\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Idiap Research Institute, Martigny, Switzerland","institution_ids":["https://openalex.org/I7495430"]},{"raw_affiliation_string":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne, Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026460704","display_name":"Fran\u00e7ois Marelli","orcid":"https://orcid.org/0000-0002-8261-238X"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]},{"id":"https://openalex.org/I7495430","display_name":"Idiap Research Institute","ror":"https://ror.org/05932h694","country_code":"CH","type":"facility","lineage":["https://openalex.org/I7495430"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Francois Marelli","raw_affiliation_strings":["Idiap Research Institute, Martigny, Switzerland","\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Idiap Research Institute, Martigny, Switzerland","institution_ids":["https://openalex.org/I7495430"]},{"raw_affiliation_string":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne, Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069887143","display_name":"Christian Jaques","orcid":"https://orcid.org/0000-0001-6873-7234"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]},{"id":"https://openalex.org/I7495430","display_name":"Idiap Research Institute","ror":"https://ror.org/05932h694","country_code":"CH","type":"facility","lineage":["https://openalex.org/I7495430"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Christian Jaques","raw_affiliation_strings":["Idiap Research Institute, Martigny, Switzerland","\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Idiap Research Institute, Martigny, Switzerland","institution_ids":["https://openalex.org/I7495430"]},{"raw_affiliation_string":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne, Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021620552","display_name":"Alexander Ernst","orcid":"https://orcid.org/0000-0002-4956-315X"},"institutions":[{"id":"https://openalex.org/I118564535","display_name":"University of Bern","ror":"https://ror.org/02k7v4d05","country_code":"CH","type":"education","lineage":["https://openalex.org/I118564535"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Alexander Ernst","raw_affiliation_strings":["Institute of Anatomy, University of Bern, Bern, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Anatomy, University of Bern, Bern, Switzerland","institution_ids":["https://openalex.org/I118564535"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100429795","display_name":"Michael Liebling","orcid":"https://orcid.org/0000-0001-7608-2733"},"institutions":[{"id":"https://openalex.org/I154570441","display_name":"University of California, Santa Barbara","ror":"https://ror.org/02t274463","country_code":"US","type":"education","lineage":["https://openalex.org/I154570441"]},{"id":"https://openalex.org/I7495430","display_name":"Idiap Research Institute","ror":"https://ror.org/05932h694","country_code":"CH","type":"facility","lineage":["https://openalex.org/I7495430"]}],"countries":["CH","US"],"is_corresponding":false,"raw_author_name":"Michael Liebling","raw_affiliation_strings":["Electrical & Computer Engineering, University of California, Santa Barbara, CA, USA","Idiap Research Institute, Martigny, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Electrical & Computer Engineering, University of California, Santa Barbara, CA, USA","institution_ids":["https://openalex.org/I154570441"]},{"raw_affiliation_string":"Idiap Research Institute, Martigny, Switzerland","institution_ids":["https://openalex.org/I7495430"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":"2","issue":null,"first_page":"868","last_page":"872"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9919999837875366,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/heartbeat","display_name":"Heartbeat","score":0.9369208812713623},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7120939493179321},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.6573025584220886},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6375369429588318},{"id":"https://openalex.org/keywords/sorting","display_name":"Sorting","score":0.5606661438941956},{"id":"https://openalex.org/keywords/encode","display_name":"ENCODE","score":0.497835636138916},{"id":"https://openalex.org/keywords/pulse","display_name":"Pulse (music)","score":0.4533693790435791},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3508593738079071},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.17665189504623413}],"concepts":[{"id":"https://openalex.org/C13852961","wikidata":"https://www.wikidata.org/wiki/Q17021880","display_name":"Heartbeat","level":2,"score":0.9369208812713623},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7120939493179321},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.6573025584220886},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6375369429588318},{"id":"https://openalex.org/C111696304","wikidata":"https://www.wikidata.org/wiki/Q2303697","display_name":"Sorting","level":2,"score":0.5606661438941956},{"id":"https://openalex.org/C66746571","wikidata":"https://www.wikidata.org/wiki/Q1134833","display_name":"ENCODE","level":3,"score":0.497835636138916},{"id":"https://openalex.org/C2780167933","wikidata":"https://www.wikidata.org/wiki/Q1550652","display_name":"Pulse (music)","level":3,"score":0.4533693790435791},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3508593738079071},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.17665189504623413},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C94915269","wikidata":"https://www.wikidata.org/wiki/Q1834857","display_name":"Detector","level":2,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/isbi48211.2021.9433858","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi48211.2021.9433858","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 IEEE 18th International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"},{"id":"pmh:oai:orbi.umons.ac.be:20.500.12907/54510","is_oa":true,"landing_page_url":"https://orbi.umons.ac.be/handle/20.500.12907/54510","pdf_url":"https://orbi.umons.ac.be/bitstream/20.500.12907/54510/1/Mariani_ISBI21_2021.pdf","source":{"id":"https://openalex.org/S7407055454","display_name":"ORBi UMONS","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"2021 IEEE 18th International Symposium on Biomedical Imaging, ISBI 2021 (2021-04-13); 2021 IEEE 18th International Symposium on Biomedical Imaging (ISBI), Virtual, Online, Fra [Fra], 13-04-2021 => 16-04-2021","raw_type":"http://purl.org/coar/resource_type/c_5794"},{"id":"pmh:oai:infoscience.epfl.ch:293926","is_oa":true,"landing_page_url":"http://infoscience.epfl.ch/record/293926","pdf_url":null,"source":{"id":"https://openalex.org/S4306400487","display_name":"Infoscience (Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"WoS","raw_type":"conference proceedings"}],"best_oa_location":{"id":"pmh:oai:orbi.umons.ac.be:20.500.12907/54510","is_oa":true,"landing_page_url":"https://orbi.umons.ac.be/handle/20.500.12907/54510","pdf_url":"https://orbi.umons.ac.be/bitstream/20.500.12907/54510/1/Mariani_ISBI21_2021.pdf","source":{"id":"https://openalex.org/S7407055454","display_name":"ORBi UMONS","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"2021 IEEE 18th International Symposium on Biomedical Imaging, ISBI 2021 (2021-04-13); 2021 IEEE 18th International Symposium on Biomedical Imaging (ISBI), Virtual, Online, Fra [Fra], 13-04-2021 => 16-04-2021","raw_type":"http://purl.org/coar/resource_type/c_5794"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G298171496","display_name":null,"funder_award_id":"206021","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G3700825588","display_name":null,"funder_award_id":"310030E-164245","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G4003212242","display_name":"Platform for Reproducible Acquisition, Processing, and Sharing of Dynamic, Multi-Modal Data","funder_award_id":"164022","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G5434564960","display_name":"The Cellular Basis of Cardiac Development Revealead by Live Imaging","funder_award_id":"164245","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G8068435768","display_name":null,"funder_award_id":"310030E","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320320924","display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung","ror":"https://ror.org/00yjd3n13"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3164146942.pdf","grobid_xml":"https://content.openalex.org/works/W3164146942.grobid-xml"},"referenced_works_count":15,"referenced_works":["https://openalex.org/W1540070193","https://openalex.org/W1543593704","https://openalex.org/W1993978935","https://openalex.org/W2009908021","https://openalex.org/W2056942342","https://openalex.org/W2118877769","https://openalex.org/W2130103520","https://openalex.org/W2139645646","https://openalex.org/W2158720169","https://openalex.org/W2957900840","https://openalex.org/W2962839490","https://openalex.org/W2969334375","https://openalex.org/W3048602567","https://openalex.org/W6677548441","https://openalex.org/W6679388247"],"related_works":["https://openalex.org/W4385543909","https://openalex.org/W3039320222","https://openalex.org/W3199640442","https://openalex.org/W1898280036","https://openalex.org/W2315807364","https://openalex.org/W2382278803","https://openalex.org/W2803040299","https://openalex.org/W2376695684","https://openalex.org/W2468279273","https://openalex.org/W2053322856"],"abstract_inverted_index":{"In":[0],"vivo":[1],"microscopy":[2],"is":[3,20,146],"an":[4,135],"important":[5],"tool":[6],"to":[7,44,72,78,88,148,167],"study":[8],"developing":[9],"organs":[10],"such":[11],"as":[12],"the":[13,16,35,49,83,106,111,142,150,165,175,179],"heart":[14,37,53],"of":[15,31,34,51,138,141],"zebrafish":[17],"embryo":[18],"but":[19,109],"often":[21],"limited":[22],"by":[23],"slow":[24],"image":[25,102],"frame":[26],"acquisition":[27],"speed.":[28],"While":[29],"collections":[30],"still":[32,84],"images":[33,91,113],"beating":[36],"at":[38,55],"arbitrary":[39],"phases":[40,60,81],"can":[41,61],"be":[42],"sorted":[43],"obtain":[45],"a":[46,68,93,154,158],"virtual":[47],"heartbeat,":[48],"presence":[50],"identical":[52],"configurations":[54],"two":[56],"or":[57,144],"more":[58,145],"heartbeat":[59,80,143,156],"derail":[62],"this":[63],"approach.":[64],"Here,":[65],"we":[66],"propose":[67,87],"dual":[69],"illumination":[70,97],"method":[71,121,163],"encode":[73,149],"movement":[74,151,180],"in":[75,82,153],"alternate":[76],"frames":[77],"disambiguate":[79],"frames.":[85,183],"We":[86,118],"alternately":[89],"acquire":[90],"with":[92,157],"ramp":[94],"and":[95,116,125,132],"pulse":[96],"then":[98],"sort":[99],"all":[100],"successive":[101],"pairs":[103],"based":[104],"on":[105,122,129,174],"ramp-illuminated":[107],"data":[108,131],"use":[110,168],"pulse-illuminated":[112],"for":[114],"display":[115],"analysis.":[117],"characterized":[119],"our":[120],"synthetic":[123],"data,":[124],"show":[126],"its":[127],"applicability":[128],"experimental":[130],"found":[133],"that":[134],"exposure":[136],"time":[137],"about":[139],"7%":[140],"necessary":[147],"reliably":[152],"single":[155,159],"redundant":[160,182],"node.":[161],"Our":[162],"opens":[164],"possibility":[166],"sorting":[169],"algorithms":[170],"without":[171],"prior":[172],"information":[173],"phase,":[176],"even":[177],"when":[178],"presents":[181]},"counts_by_year":[{"year":2023,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
