{"id":"https://openalex.org/W2939239448","doi":"https://doi.org/10.1109/isbi45749.2020.9098489","title":"Synaptic Partner Assignment Using Attentional Voxel Association Networks","display_name":"Synaptic Partner Assignment Using Attentional Voxel Association Networks","publication_year":2020,"publication_date":"2020-04-01","ids":{"openalex":"https://openalex.org/W2939239448","doi":"https://doi.org/10.1109/isbi45749.2020.9098489","mag":"2939239448"},"language":"en","primary_location":{"id":"doi:10.1109/isbi45749.2020.9098489","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi45749.2020.9098489","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2020 IEEE 17th International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"},"type":"preprint","indexed_in":["arxiv","crossref","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/1904.09947","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5042520357","display_name":"Nicholas L. Turner","orcid":"https://orcid.org/0000-0001-5382-3420"},"institutions":[{"id":"https://openalex.org/I4210113153","display_name":"Neuroscience Institute","ror":"https://ror.org/0240rwx68","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210113153","https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I20089843","display_name":"Princeton University","ror":"https://ror.org/00hx57361","country_code":"US","type":"education","lineage":["https://openalex.org/I20089843"]}],"countries":["IT","US"],"is_corresponding":true,"raw_author_name":"Nicholas L. Turner","raw_affiliation_strings":["Princeton University - Neuroscience Institute"],"affiliations":[{"raw_affiliation_string":"Princeton University - Neuroscience Institute","institution_ids":["https://openalex.org/I4210113153","https://openalex.org/I20089843"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101950460","display_name":"Kisuk Lee","orcid":"https://orcid.org/0000-0001-5707-0155"},"institutions":[{"id":"https://openalex.org/I20089843","display_name":"Princeton University","ror":"https://ror.org/00hx57361","country_code":"US","type":"education","lineage":["https://openalex.org/I20089843"]},{"id":"https://openalex.org/I4210113153","display_name":"Neuroscience Institute","ror":"https://ror.org/0240rwx68","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210113153","https://openalex.org/I4210155236"]}],"countries":["IT","US"],"is_corresponding":false,"raw_author_name":"Kisuk Lee","raw_affiliation_strings":["Princeton University - Neuroscience Institute"],"affiliations":[{"raw_affiliation_string":"Princeton University - Neuroscience Institute","institution_ids":["https://openalex.org/I4210113153","https://openalex.org/I20089843"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036614566","display_name":"Ran Lu","orcid":"https://orcid.org/0000-0002-2077-8165"},"institutions":[{"id":"https://openalex.org/I20089843","display_name":"Princeton University","ror":"https://ror.org/00hx57361","country_code":"US","type":"education","lineage":["https://openalex.org/I20089843"]},{"id":"https://openalex.org/I4210113153","display_name":"Neuroscience Institute","ror":"https://ror.org/0240rwx68","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210113153","https://openalex.org/I4210155236"]}],"countries":["IT","US"],"is_corresponding":false,"raw_author_name":"Ran Lu","raw_affiliation_strings":["Princeton University - Neuroscience Institute"],"affiliations":[{"raw_affiliation_string":"Princeton University - Neuroscience Institute","institution_ids":["https://openalex.org/I4210113153","https://openalex.org/I20089843"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047394906","display_name":"Jingpeng Wu","orcid":"https://orcid.org/0000-0003-1604-8802"},"institutions":[{"id":"https://openalex.org/I20089843","display_name":"Princeton University","ror":"https://ror.org/00hx57361","country_code":"US","type":"education","lineage":["https://openalex.org/I20089843"]},{"id":"https://openalex.org/I4210113153","display_name":"Neuroscience Institute","ror":"https://ror.org/0240rwx68","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210113153","https://openalex.org/I4210155236"]}],"countries":["IT","US"],"is_corresponding":false,"raw_author_name":"Jingpeng Wu","raw_affiliation_strings":["Princeton University - Neuroscience Institute"],"affiliations":[{"raw_affiliation_string":"Princeton University - Neuroscience Institute","institution_ids":["https://openalex.org/I4210113153","https://openalex.org/I20089843"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000580352","display_name":"Dodam Ih","orcid":"https://orcid.org/0000-0002-0295-8445"},"institutions":[{"id":"https://openalex.org/I20089843","display_name":"Princeton University","ror":"https://ror.org/00hx57361","country_code":"US","type":"education","lineage":["https://openalex.org/I20089843"]},{"id":"https://openalex.org/I4210113153","display_name":"Neuroscience Institute","ror":"https://ror.org/0240rwx68","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210113153","https://openalex.org/I4210155236"]}],"countries":["IT","US"],"is_corresponding":false,"raw_author_name":"Dodam Ih","raw_affiliation_strings":["Princeton University - Neuroscience Institute"],"affiliations":[{"raw_affiliation_string":"Princeton University - Neuroscience Institute","institution_ids":["https://openalex.org/I4210113153","https://openalex.org/I20089843"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5044273339","display_name":"H. Sebastian Seung","orcid":"https://orcid.org/0000-0002-8591-6733"},"institutions":[{"id":"https://openalex.org/I4210113153","display_name":"Neuroscience Institute","ror":"https://ror.org/0240rwx68","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210113153","https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I20089843","display_name":"Princeton University","ror":"https://ror.org/00hx57361","country_code":"US","type":"education","lineage":["https://openalex.org/I20089843"]}],"countries":["IT","US"],"is_corresponding":false,"raw_author_name":"H. Sebastian Seung","raw_affiliation_strings":["Princeton University - Neuroscience Institute"],"affiliations":[{"raw_affiliation_string":"Princeton University - Neuroscience Institute","institution_ids":["https://openalex.org/I4210113153","https://openalex.org/I20089843"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5042520357"],"corresponding_institution_ids":["https://openalex.org/I20089843","https://openalex.org/I4210113153"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":5,"citation_normalized_percentile":{"value":0.00477713,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"5"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10581","display_name":"Neural dynamics and brain function","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10581","display_name":"Neural dynamics and brain function","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10502","display_name":"Advanced Memory and Neural Computing","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11992","display_name":"CCD and CMOS Imaging Sensors","score":0.987500011920929,"subfield":{"id":"https://openalex.org/subfields/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/connectomics","display_name":"Connectomics","score":0.8587714433670044},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6488034129142761},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.62903892993927},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.48331475257873535},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4780500531196594},{"id":"https://openalex.org/keywords/synaptic-cleft","display_name":"Synaptic cleft","score":0.4257873296737671},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.41340386867523193},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4069616496562958},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.40432071685791016},{"id":"https://openalex.org/keywords/connectome","display_name":"Connectome","score":0.29007530212402344},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.20351964235305786},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11565932631492615},{"id":"https://openalex.org/keywords/functional-connectivity","display_name":"Functional connectivity","score":0.08212855458259583},{"id":"https://openalex.org/keywords/neurotransmitter","display_name":"Neurotransmitter","score":0.06472897529602051}],"concepts":[{"id":"https://openalex.org/C2779097318","wikidata":"https://www.wikidata.org/wiki/Q2993446","display_name":"Connectomics","level":4,"score":0.8587714433670044},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6488034129142761},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.62903892993927},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.48331475257873535},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4780500531196594},{"id":"https://openalex.org/C2993285035","wikidata":"https://www.wikidata.org/wiki/Q2643251","display_name":"Synaptic cleft","level":4,"score":0.4257873296737671},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.41340386867523193},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4069616496562958},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.40432071685791016},{"id":"https://openalex.org/C45715564","wikidata":"https://www.wikidata.org/wiki/Q1292103","display_name":"Connectome","level":3,"score":0.29007530212402344},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.20351964235305786},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11565932631492615},{"id":"https://openalex.org/C3018011982","wikidata":"https://www.wikidata.org/wiki/Q7316120","display_name":"Functional connectivity","level":2,"score":0.08212855458259583},{"id":"https://openalex.org/C2776219046","wikidata":"https://www.wikidata.org/wiki/Q162657","display_name":"Neurotransmitter","level":3,"score":0.06472897529602051},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C529278444","wikidata":"https://www.wikidata.org/wiki/Q47273","display_name":"Central nervous system","level":2,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1109/isbi45749.2020.9098489","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi45749.2020.9098489","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2020 IEEE 17th International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"},{"id":"pmh:oai:arXiv.org:1904.09947","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1904.09947","pdf_url":"https://arxiv.org/pdf/1904.09947","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},{"id":"doi:10.48550/arxiv.1904.09947","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.1904.09947","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"},{"id":"doi:10.17023/0786-wt61","is_oa":true,"landing_page_url":"https://doi.org/10.17023/0786-wt61","pdf_url":null,"source":{"id":"https://openalex.org/S7407051697","display_name":"IEEE RESOURCE CENTERS","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"},{"id":"mag:2939239448","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":null}],"best_oa_location":{"id":"pmh:oai:arXiv.org:1904.09947","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1904.09947","pdf_url":"https://arxiv.org/pdf/1904.09947","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals","score":0.44999998807907104}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2939239448.pdf","grobid_xml":"https://content.openalex.org/works/W2939239448.grobid-xml"},"referenced_works_count":25,"referenced_works":["https://openalex.org/W1513082520","https://openalex.org/W1522301498","https://openalex.org/W1802803394","https://openalex.org/W2168072374","https://openalex.org/W2175975598","https://openalex.org/W2196860498","https://openalex.org/W2231099397","https://openalex.org/W2410303706","https://openalex.org/W2535388113","https://openalex.org/W2546630027","https://openalex.org/W2560374178","https://openalex.org/W2579549467","https://openalex.org/W2581591112","https://openalex.org/W2592023542","https://openalex.org/W2592731197","https://openalex.org/W2607855566","https://openalex.org/W2613718673","https://openalex.org/W2621042378","https://openalex.org/W2899771611","https://openalex.org/W2951838044","https://openalex.org/W2962948284","https://openalex.org/W2963585925","https://openalex.org/W2963659894","https://openalex.org/W6620707391","https://openalex.org/W6756040250"],"related_works":["https://openalex.org/W3028116930","https://openalex.org/W2809371788","https://openalex.org/W2995555946","https://openalex.org/W2951838044","https://openalex.org/W2157291765","https://openalex.org/W1967652023","https://openalex.org/W2363646478","https://openalex.org/W2964175294","https://openalex.org/W2537756001","https://openalex.org/W2949576867","https://openalex.org/W3020648426","https://openalex.org/W3095213359","https://openalex.org/W2026091487","https://openalex.org/W3091662731","https://openalex.org/W2949276637","https://openalex.org/W2101918431","https://openalex.org/W3033502539","https://openalex.org/W3005800393","https://openalex.org/W1978258490","https://openalex.org/W3129175691"],"abstract_inverted_index":{"Connectomics":[0],"aims":[1],"to":[2,33,70,94,159],"recover":[3],"a":[4,11,31,41,62,67,82,86,144,156],"complete":[5],"set":[6],"of":[7,48,57,105,138,146,155],"synaptic":[8,36,42,50,59],"connections":[9],"within":[10,109],"dataset":[12,145],"imaged":[13],"by":[14],"volume":[15],"electron":[16],"microscopy.":[17],"Many":[18],"systems":[19],"have":[20],"been":[21],"proposed":[22],"for":[23,117,130],"locating":[24],"synapses,":[25],"and":[26,81,113,150,163],"recent":[27],"research":[28],"has":[29],"included":[30],"way":[32],"identify":[34],"the":[35,46,55,58,77,103,106,110,118,131],"partners":[37,51,60],"that":[38,135],"communicate":[39],"at":[40],"cleft.":[43,64],"We":[44,65,133],"reframe":[45],"problem":[47],"identifying":[49],"as":[52,89,125,153],"directly":[53],"generating":[54],"mask":[56,84,123],"from":[61],"given":[63],"train":[66],"convolutional":[68],"network":[69,75],"perform":[71],"this":[72,139],"task.":[73],"The":[74,121],"takes":[76],"local":[78],"image":[79],"context":[80],"binary":[83,97],"representing":[85],"single":[87],"cleft":[88,122],"input.":[90],"It":[91],"is":[92],"trained":[93],"produce":[95],"two":[96],"output":[98],"masks:":[99],"one":[100],"which":[101],"labels":[102],"voxels":[104],"presynaptic":[107],"partner":[108],"input":[111],"image,":[112],"another":[114],"similar":[115],"labeling":[116],"postsynaptic":[119],"partner.":[120],"acts":[124],"an":[126,136],"attentional":[127],"gating":[128],"signal":[129],"network.":[132],"find":[134],"implementation":[137],"approach":[140],"performs":[141],"well":[142],"on":[143],"mouse":[147],"somatosensory":[148],"cortex,":[149],"evaluate":[151],"it":[152],"part":[154],"combined":[157],"system":[158],"predict":[160],"both":[161],"clefts":[162],"connections.":[164]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":1},{"year":2019,"cited_by_count":1}],"updated_date":"2026-03-10T16:38:18.471706","created_date":"2025-10-10T00:00:00"}
