{"id":"https://openalex.org/W2902149960","doi":"https://doi.org/10.1109/isbi.2019.8759569","title":"Cerebrovascular Network Segmentation of MRA Images With Deep Learning","display_name":"Cerebrovascular Network Segmentation of MRA Images With Deep Learning","publication_year":2019,"publication_date":"2019-04-01","ids":{"openalex":"https://openalex.org/W2902149960","doi":"https://doi.org/10.1109/isbi.2019.8759569","mag":"2902149960"},"language":"en","primary_location":{"id":"doi:10.1109/isbi.2019.8759569","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi.2019.8759569","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019)","raw_type":"proceedings-article"},"type":"preprint","indexed_in":["arxiv","crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/1812.01752","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5030975514","display_name":"Pedro Sanchesa","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210100283","display_name":"Laboratoire des Sciences de l'Ing\u00e9nieur, de l'Informatique et de l'Imagerie","ror":"https://ror.org/00k4e5n71","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I2801509770","https://openalex.org/I4210095849","https://openalex.org/I4210100283","https://openalex.org/I4210159245","https://openalex.org/I68947357"]},{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Pedro Sanchesa","raw_affiliation_strings":["ICube, Universite de Strasbourg, CNRS, France","ICube - Laboratoire des sciences de l'ing\u00e9nieur, de l'informatique et de l'imagerie (300 bd S\u00e9bastien Brant - BP 10413 - F-67412 Illkirch Cedex - France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ICube, Universite de Strasbourg, CNRS, France","institution_ids":["https://openalex.org/I68947357","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"ICube - Laboratoire des sciences de l'ing\u00e9nieur, de l'informatique et de l'imagerie (300 bd S\u00e9bastien Brant - BP 10413 - F-67412 Illkirch Cedex - France)","institution_ids":["https://openalex.org/I4210100283"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072134477","display_name":"Cyril Meyer","orcid":"https://orcid.org/0000-0001-7262-999X"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210100283","display_name":"Laboratoire des Sciences de l'Ing\u00e9nieur, de l'Informatique et de l'Imagerie","ror":"https://ror.org/00k4e5n71","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I2801509770","https://openalex.org/I4210095849","https://openalex.org/I4210100283","https://openalex.org/I4210159245","https://openalex.org/I68947357"]},{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Cyril Meyer","raw_affiliation_strings":["ICube, Universite de Strasbourg, CNRS, France","ICube - Laboratoire des sciences de l'ing\u00e9nieur, de l'informatique et de l'imagerie (300 bd S\u00e9bastien Brant - BP 10413 - F-67412 Illkirch Cedex - France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ICube, Universite de Strasbourg, CNRS, France","institution_ids":["https://openalex.org/I68947357","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"ICube - Laboratoire des sciences de l'ing\u00e9nieur, de l'informatique et de l'imagerie (300 bd S\u00e9bastien Brant - BP 10413 - F-67412 Illkirch Cedex - France)","institution_ids":["https://openalex.org/I4210100283"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058659050","display_name":"Vincent Vigon","orcid":null},"institutions":[{"id":"https://openalex.org/I4210118362","display_name":"Institut de Recherche Math\u00e9matique Avanc\u00e9e","ror":"https://ror.org/02hwgty18","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I4210118362","https://openalex.org/I4210141950","https://openalex.org/I68947357"]},{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Vincent Vigon","raw_affiliation_strings":["Irma, Universite de Strasbourg, France","IRMA - Institut de Recherche Math\u00e9matique Avanc\u00e9e (7 rue Ren\u00e9-Descartes, 67084 Strasbourg Cedex, France - France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Irma, Universite de Strasbourg, France","institution_ids":["https://openalex.org/I4210118362","https://openalex.org/I68947357"]},{"raw_affiliation_string":"IRMA - Institut de Recherche Math\u00e9matique Avanc\u00e9e (7 rue Ren\u00e9-Descartes, 67084 Strasbourg Cedex, France - France)","institution_ids":["https://openalex.org/I4210118362"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5086489846","display_name":"Beno\u00eet Naegel","orcid":"https://orcid.org/0000-0002-7695-1473"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210100283","display_name":"Laboratoire des Sciences de l'Ing\u00e9nieur, de l'Informatique et de l'Imagerie","ror":"https://ror.org/00k4e5n71","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I2801509770","https://openalex.org/I4210095849","https://openalex.org/I4210100283","https://openalex.org/I4210159245","https://openalex.org/I68947357"]},{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Benoit Naegel","raw_affiliation_strings":["ICube, Universite de Strasbourg, CNRS, France","ICube - Laboratoire des sciences de l'ing\u00e9nieur, de l'informatique et de l'imagerie (300 bd S\u00e9bastien Brant - BP 10413 - F-67412 Illkirch Cedex - France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ICube, Universite de Strasbourg, CNRS, France","institution_ids":["https://openalex.org/I68947357","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"ICube - Laboratoire des sciences de l'ing\u00e9nieur, de l'informatique et de l'imagerie (300 bd S\u00e9bastien Brant - BP 10413 - F-67412 Illkirch Cedex - France)","institution_ids":["https://openalex.org/I4210100283"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":2.7427,"has_fulltext":true,"cited_by_count":62,"citation_normalized_percentile":{"value":0.92391749,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":null,"issue":null,"first_page":"768","last_page":"771"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11438","display_name":"Retinal Imaging and Analysis","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10036","display_name":"Advanced Neural Network Applications","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.8164680004119873},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.7018482089042664},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6842978000640869},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6746745109558105},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6725776791572571},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.6477344632148743},{"id":"https://openalex.org/keywords/architecture","display_name":"Architecture","score":0.47732359170913696},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.4745037257671356},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.420754611492157},{"id":"https://openalex.org/keywords/state","display_name":"State (computer science)","score":0.41326045989990234},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.4058515727519989},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3911193013191223},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.15222659707069397},{"id":"https://openalex.org/keywords/geology","display_name":"Geology","score":0.10895153880119324},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.09403577446937561}],"concepts":[{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.8164680004119873},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.7018482089042664},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6842978000640869},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6746745109558105},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6725776791572571},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.6477344632148743},{"id":"https://openalex.org/C123657996","wikidata":"https://www.wikidata.org/wiki/Q12271","display_name":"Architecture","level":2,"score":0.47732359170913696},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.4745037257671356},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.420754611492157},{"id":"https://openalex.org/C48103436","wikidata":"https://www.wikidata.org/wiki/Q599031","display_name":"State (computer science)","level":2,"score":0.41326045989990234},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.4058515727519989},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3911193013191223},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.15222659707069397},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.10895153880119324},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.09403577446937561},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/isbi.2019.8759569","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi.2019.8759569","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019)","raw_type":"proceedings-article"},{"id":"pmh:oai:arXiv.org:1812.01752","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1812.01752","pdf_url":"https://arxiv.org/pdf/1812.01752","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},{"id":"pmh:oai:HAL:hal-03606933v1","is_oa":true,"landing_page_url":"https://hal.science/hal-03606933","pdf_url":"https://hal.science/hal-03606933v1/document","source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI), Apr 2019, Venice, Italy. pp.768-771, &#x27E8;10.1109/ISBI.2019.8759569&#x27E9;","raw_type":"Conference papers"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:1812.01752","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1812.01752","pdf_url":"https://arxiv.org/pdf/1812.01752","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1012062916","display_name":"VIrtual angiography simulation from 3D and 3D+t BRAIN VAscular models","funder_award_id":"ANR-12-MONU-0010","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W173412550","https://openalex.org/W1901129140","https://openalex.org/W1986948114","https://openalex.org/W2035556493","https://openalex.org/W2097117768","https://openalex.org/W2134756983","https://openalex.org/W2274287116","https://openalex.org/W2327793514","https://openalex.org/W2464708700","https://openalex.org/W2592929672","https://openalex.org/W2781824996","https://openalex.org/W2794642825","https://openalex.org/W2962914239","https://openalex.org/W2964350391","https://openalex.org/W4300956932","https://openalex.org/W6639824700","https://openalex.org/W6694260854","https://openalex.org/W6750104346"],"related_works":["https://openalex.org/W4293226380","https://openalex.org/W4375867731","https://openalex.org/W2611989081","https://openalex.org/W4226493464","https://openalex.org/W4312417841","https://openalex.org/W3133861977","https://openalex.org/W2951211570","https://openalex.org/W3103566983","https://openalex.org/W3029198973","https://openalex.org/W1522196789"],"abstract_inverted_index":{"Deep":[0],"learning":[1],"has":[2,91],"been":[3],"shown":[4],"to":[5],"produce":[6],"state":[7],"of":[8,23,73],"the":[9,24,62,67,74,88,92],"art":[10,75],"results":[11,85],"in":[12,15,19,47,95],"many":[13],"tasks":[14],"biomedical":[16],"imaging,":[17],"especially":[18],"segmentation.":[20],"Moreover,":[21],"segmentation":[22],"cerebrovascular":[25],"structure":[26],"from":[27],"magnetic":[28],"resonance":[29],"angiography":[30],"is":[31],"a":[32,42,52,80],"challenging":[33],"problem":[34,59],"because":[35],"its":[36],"complex":[37],"geometry":[38],"and":[39,65,83],"topology":[40],"have":[41],"large":[43],"inter-patient":[44],"variability.":[45],"Therefore,":[46],"this":[48,58,96],"work,":[49],"we":[50],"present":[51],"convolutional":[53],"neural":[54],"network":[55],"approach":[56],"for":[57,79],"inspired":[60],"by":[61,66],"U-net":[63],"3D":[64],"Inception":[68],"modules,":[69],"entitled":[70],"Uception.":[71],"State":[72],"models":[76],"are":[77],"implemented":[78],"comparison":[81],"purpose":[82],"final":[84],"show":[86],"that":[87],"proposed":[89],"architecture":[90],"best":[93],"performance":[94],"particular":[97],"context.":[98]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":17},{"year":2023,"cited_by_count":13},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":9},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":2}],"updated_date":"2026-06-22T08:00:12.763002","created_date":"2018-12-11T00:00:00"}
