{"id":"https://openalex.org/W2806838025","doi":"https://doi.org/10.1109/isbi.2018.8363776","title":"Automatic tracking of multiple zebrafish larvae with resilience against segmentation errors","display_name":"Automatic tracking of multiple zebrafish larvae with resilience against segmentation errors","publication_year":2018,"publication_date":"2018-04-01","ids":{"openalex":"https://openalex.org/W2806838025","doi":"https://doi.org/10.1109/isbi.2018.8363776","mag":"2806838025"},"language":"en","primary_location":{"id":"doi:10.1109/isbi.2018.8363776","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi.2018.8363776","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2018 IEEE 15th International Symposium on Biomedical Imaging (ISBI 2018)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":null,"any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100364306","display_name":"Xiaoying Wang","orcid":"https://orcid.org/0000-0003-3636-7931"},"institutions":[{"id":"https://openalex.org/I82951845","display_name":"RMIT University","ror":"https://ror.org/04ttjf776","country_code":"AU","type":"education","lineage":["https://openalex.org/I82951845"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Xiaoying Wang","raw_affiliation_strings":["School of Engineering, RMIT University, Melbourne, Australia"],"affiliations":[{"raw_affiliation_string":"School of Engineering, RMIT University, Melbourne, Australia","institution_ids":["https://openalex.org/I82951845"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014680033","display_name":"Eva Cheng","orcid":"https://orcid.org/0000-0003-1632-8062"},"institutions":[{"id":"https://openalex.org/I114017466","display_name":"University of Technology Sydney","ror":"https://ror.org/03f0f6041","country_code":"AU","type":"education","lineage":["https://openalex.org/I114017466"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Eva Cheng","raw_affiliation_strings":["Faculty of Engineering and Information Technology, University of Technology Sydney, Australia"],"affiliations":[{"raw_affiliation_string":"Faculty of Engineering and Information Technology, University of Technology Sydney, Australia","institution_ids":["https://openalex.org/I114017466"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030755672","display_name":"Lee Burnett","orcid":"https://orcid.org/0000-0003-3795-7722"},"institutions":[{"id":"https://openalex.org/I82951845","display_name":"RMIT University","ror":"https://ror.org/04ttjf776","country_code":"AU","type":"education","lineage":["https://openalex.org/I82951845"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Ian S. Burnett","raw_affiliation_strings":["School of Engineering, RMIT University, Melbourne, Australia"],"affiliations":[{"raw_affiliation_string":"School of Engineering, RMIT University, Melbourne, Australia","institution_ids":["https://openalex.org/I82951845"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060108418","display_name":"Richardt H. Wilkinson","orcid":"https://orcid.org/0000-0003-1318-8447"},"institutions":[{"id":"https://openalex.org/I82951845","display_name":"RMIT University","ror":"https://ror.org/04ttjf776","country_code":"AU","type":"education","lineage":["https://openalex.org/I82951845"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Richardt Wilkinson","raw_affiliation_strings":["School of Engineering, RMIT University, Melbourne, Australia"],"affiliations":[{"raw_affiliation_string":"School of Engineering, RMIT University, Melbourne, Australia","institution_ids":["https://openalex.org/I82951845"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5065207789","display_name":"Margaret Lech","orcid":"https://orcid.org/0000-0002-7860-7289"},"institutions":[{"id":"https://openalex.org/I82951845","display_name":"RMIT University","ror":"https://ror.org/04ttjf776","country_code":"AU","type":"education","lineage":["https://openalex.org/I82951845"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Margaret Lech","raw_affiliation_strings":["School of Engineering, RMIT University, Melbourne, Australia"],"affiliations":[{"raw_affiliation_string":"School of Engineering, RMIT University, Melbourne, Australia","institution_ids":["https://openalex.org/I82951845"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5100364306"],"corresponding_institution_ids":["https://openalex.org/I82951845"],"apc_list":null,"apc_paid":null,"fwci":0.5894,"has_fulltext":false,"cited_by_count":11,"citation_normalized_percentile":{"value":0.64054426,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"13","issue":null,"first_page":"1157","last_page":"1160"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11685","display_name":"Zebrafish Biomedical Research Applications","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11685","display_name":"Zebrafish Biomedical Research Applications","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12697","display_name":"Water Quality Monitoring Technologies","score":0.9853000044822693,"subfield":{"id":"https://openalex.org/subfields/2312","display_name":"Water Science and Technology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10302","display_name":"Fish Ecology and Management Studies","score":0.9805999994277954,"subfield":{"id":"https://openalex.org/subfields/2309","display_name":"Nature and Landscape Conservation"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/zebrafish","display_name":"Zebrafish","score":0.7497979402542114},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7337909936904907},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.7317710518836975},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.7136444449424744},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.7044278383255005},{"id":"https://openalex.org/keywords/tracking","display_name":"Tracking (education)","score":0.5834363102912903},{"id":"https://openalex.org/keywords/pixel","display_name":"Pixel","score":0.5662091970443726},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.5496219396591187},{"id":"https://openalex.org/keywords/object-detection","display_name":"Object detection","score":0.4987223148345947},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.49295997619628906},{"id":"https://openalex.org/keywords/video-tracking","display_name":"Video tracking","score":0.44408559799194336},{"id":"https://openalex.org/keywords/object","display_name":"Object (grammar)","score":0.34307777881622314},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1293574869632721}],"concepts":[{"id":"https://openalex.org/C2776878037","wikidata":"https://www.wikidata.org/wiki/Q169444","display_name":"Zebrafish","level":3,"score":0.7497979402542114},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7337909936904907},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.7317710518836975},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.7136444449424744},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.7044278383255005},{"id":"https://openalex.org/C2775936607","wikidata":"https://www.wikidata.org/wiki/Q466845","display_name":"Tracking (education)","level":2,"score":0.5834363102912903},{"id":"https://openalex.org/C160633673","wikidata":"https://www.wikidata.org/wiki/Q355198","display_name":"Pixel","level":2,"score":0.5662091970443726},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.5496219396591187},{"id":"https://openalex.org/C2776151529","wikidata":"https://www.wikidata.org/wiki/Q3045304","display_name":"Object detection","level":3,"score":0.4987223148345947},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.49295997619628906},{"id":"https://openalex.org/C202474056","wikidata":"https://www.wikidata.org/wiki/Q1931635","display_name":"Video tracking","level":3,"score":0.44408559799194336},{"id":"https://openalex.org/C2781238097","wikidata":"https://www.wikidata.org/wiki/Q175026","display_name":"Object (grammar)","level":2,"score":0.34307777881622314},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1293574869632721},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C19417346","wikidata":"https://www.wikidata.org/wiki/Q7922","display_name":"Pedagogy","level":1,"score":0.0},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1109/isbi.2018.8363776","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi.2018.8363776","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2018 IEEE 15th International Symposium on Biomedical Imaging (ISBI 2018)","raw_type":"proceedings-article"},{"id":"pmh:oai:alma.61RMIT_INST:11248103250001341","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ISBI.2018.8363776","pdf_url":null,"source":{"id":"https://openalex.org/S4306402074","display_name":"RMIT Research Repository (RMIT University Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I82951845","host_organization_name":"RMIT University","host_organization_lineage":["https://openalex.org/I82951845"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},{"id":"pmh:oai:figshare.com:article/27581898","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:opus.lib.uts.edu.au:10453/133758","is_oa":false,"landing_page_url":"http://hdl.handle.net/10453/133758","pdf_url":null,"source":{"id":"https://openalex.org/S4306401357","display_name":"UTS ePRESS (University of Technology Sydney)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I114017466","host_organization_name":"University of Technology Sydney","host_organization_lineage":["https://openalex.org/I114017466"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Conference Proceeding"}],"best_oa_location":{"id":"pmh:oai:figshare.com:article/27581898","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":13,"referenced_works":["https://openalex.org/W1975675300","https://openalex.org/W1983941601","https://openalex.org/W2001457444","https://openalex.org/W2035866593","https://openalex.org/W2078487259","https://openalex.org/W2124781496","https://openalex.org/W2153232075","https://openalex.org/W2222512263","https://openalex.org/W2433536783","https://openalex.org/W2588481349","https://openalex.org/W2594123793","https://openalex.org/W2620562588","https://openalex.org/W6718254414"],"related_works":["https://openalex.org/W3129642199","https://openalex.org/W4256528904","https://openalex.org/W1597543017","https://openalex.org/W4293058866","https://openalex.org/W4245153001","https://openalex.org/W3147492987","https://openalex.org/W4243165149","https://openalex.org/W4237600267","https://openalex.org/W4283069614","https://openalex.org/W2965594636"],"abstract_inverted_index":{"The":[0,40,85,116],"accurate":[1,20],"tracking":[2,26],"of":[3,59,71,93,122],"zebrafish":[4,24,66],"larvae":[5,25,65],"movement":[6],"is":[7],"essential":[8],"to":[9,29,35,47,95,99,132],"many":[10],"biomedical":[11],"and":[12,21,31,38,61,64,82,104,128],"neural":[13],"science":[14],"applications.":[15],"This":[16],"paper":[17],"develops":[18],"an":[19,119],"reliable":[22],"multiple":[23,62],"system":[27,42,87],"resilient":[28],"detection":[30],"segmentation":[32],"errors":[33],"due":[34],"object":[36],"misdetection":[37],"occlusion.":[39],"proposed":[41,86],"can":[43],"therefore":[44],"be":[45],"applied":[46],"microscopic":[48],"videos":[49],"in":[50],"unconstrained,":[51],"realistic":[52],"imaging":[53],"conditions.":[54],"Evaluated":[55],"on":[56],"a":[57,68],"set":[58],"single":[60],"adult":[63],"videos,":[67],"wide":[69],"variety":[70],"(complex)":[72],"video":[73],"conditions":[74],"were":[75],"tested,":[76],"including":[77],"shadowing,":[78],"labels,":[79],"water":[80],"bubbles":[81],"background":[83],"artefacts.":[84],"obtains":[88],"decreased":[89],"overall":[90],"MOTP":[91],"error":[92],"up":[94],"44.49":[96],"pixels":[97],"compared":[98,110,131],"the":[100,112],"commercial":[101],"LoliTrack":[102],"system,":[103],"increased":[105,126],"MOTA":[106],"accuracy":[107,127],"by":[108],"31.57%":[109],"with":[111],"state-of-the-art":[113],"idTracker":[114],"approach.":[115],"results":[117],"offer":[118],"additional":[120],"advantage":[121],"improved":[123],"position":[124],"detection,":[125],"unique":[129],"identification":[130],"current":[133],"techniques.":[134]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":5},{"year":2021,"cited_by_count":5}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
