{"id":"https://openalex.org/W2628196379","doi":"https://doi.org/10.1109/isbi.2017.7950552","title":"Dynamic registration for gigapixel serial whole slide images","display_name":"Dynamic registration for gigapixel serial whole slide images","publication_year":2017,"publication_date":"2017-04-01","ids":{"openalex":"https://openalex.org/W2628196379","doi":"https://doi.org/10.1109/isbi.2017.7950552","mag":"2628196379","pmid":"https://pubmed.ncbi.nlm.nih.gov/28804569"},"language":"en","primary_location":{"id":"doi:10.1109/isbi.2017.7950552","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi.2017.7950552","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2017 IEEE 14th International Symposium on Biomedical Imaging (ISBI 2017)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5550903","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5029856761","display_name":"Blair J. Rossetti","orcid":"https://orcid.org/0000-0003-2405-4209"},"institutions":[{"id":"https://openalex.org/I150468666","display_name":"Emory University","ror":"https://ror.org/03czfpz43","country_code":"US","type":"education","lineage":["https://openalex.org/I150468666"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Blair J. Rossetti","raw_affiliation_strings":["Department of Biomedical Informatics, Emory University, Atlanta, GA, 30322, USA","Department of Biomedical Informatics, Emory University, Atlanta, GA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, Emory University, Atlanta, GA, 30322, USA","institution_ids":["https://openalex.org/I150468666"]},{"raw_affiliation_string":"Department of Biomedical Informatics, Emory University, Atlanta, GA, USA","institution_ids":["https://openalex.org/I150468666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100704639","display_name":"Fusheng Wang","orcid":"https://orcid.org/0000-0002-9369-9361"},"institutions":[{"id":"https://openalex.org/I59553526","display_name":"Stony Brook University","ror":"https://ror.org/05qghxh33","country_code":"US","type":"education","lineage":["https://openalex.org/I59553526"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Fusheng Wang","raw_affiliation_strings":["Department of Computer Science, Stony Brook University, Stony Brook, NY, 11794, USA","Department of Computer Science, Stony Brook University Stony Brook, NY, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Stony Brook University, Stony Brook, NY, 11794, USA","institution_ids":["https://openalex.org/I59553526"]},{"raw_affiliation_string":"Department of Computer Science, Stony Brook University Stony Brook, NY, USA","institution_ids":["https://openalex.org/I59553526"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076330540","display_name":"Pengyue Zhang","orcid":"https://orcid.org/0000-0002-7381-9303"},"institutions":[{"id":"https://openalex.org/I59553526","display_name":"Stony Brook University","ror":"https://ror.org/05qghxh33","country_code":"US","type":"education","lineage":["https://openalex.org/I59553526"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Pengyue Zhang","raw_affiliation_strings":["Department of Computer Science, Stony Brook University, Stony Brook, NY, 11794, USA","Department of Computer Science, Stony Brook University Stony Brook, NY, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Stony Brook University, Stony Brook, NY, 11794, USA","institution_ids":["https://openalex.org/I59553526"]},{"raw_affiliation_string":"Department of Computer Science, Stony Brook University Stony Brook, NY, USA","institution_ids":["https://openalex.org/I59553526"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076465098","display_name":"George Teodoro","orcid":"https://orcid.org/0000-0001-6289-3914"},"institutions":[{"id":"https://openalex.org/I150729083","display_name":"Universidade de Bras\u00edlia","ror":"https://ror.org/02xfp8v59","country_code":"BR","type":"education","lineage":["https://openalex.org/I150729083"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"George Teodoro","raw_affiliation_strings":["Department of Computer Science, University of Bras\u00edlia, Bras\u00edlia, DF, Brazil","Department of Computer Science, University of Bras\u03aflia, Bras\u03aflia, DF, Brazil"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Bras\u00edlia, Bras\u00edlia, DF, Brazil","institution_ids":["https://openalex.org/I150729083"]},{"raw_affiliation_string":"Department of Computer Science, University of Bras\u03aflia, Bras\u03aflia, DF, Brazil","institution_ids":["https://openalex.org/I150729083"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078484855","display_name":"Daniel J. Brat","orcid":"https://orcid.org/0000-0002-0633-6563"},"institutions":[{"id":"https://openalex.org/I150468666","display_name":"Emory University","ror":"https://ror.org/03czfpz43","country_code":"US","type":"education","lineage":["https://openalex.org/I150468666"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel J. Brat","raw_affiliation_strings":["Department of Pathology, Emory University, Atlanta, GA, 30322, USA","Department of Pathology, Emory University, Atlanta, GA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Pathology, Emory University, Atlanta, GA, 30322, USA","institution_ids":["https://openalex.org/I150468666"]},{"raw_affiliation_string":"Department of Pathology, Emory University, Atlanta, GA, USA","institution_ids":["https://openalex.org/I150468666"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066949209","display_name":"Jun Kong","orcid":"https://orcid.org/0000-0001-8757-8339"},"institutions":[{"id":"https://openalex.org/I150468666","display_name":"Emory University","ror":"https://ror.org/03czfpz43","country_code":"US","type":"education","lineage":["https://openalex.org/I150468666"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jun Kong","raw_affiliation_strings":["Department of Biomedical Informatics, Emory University, Atlanta, GA, 30322, USA","Department of Biomedical Informatics, Emory University, Atlanta, GA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, Emory University, Atlanta, GA, 30322, USA","institution_ids":["https://openalex.org/I150468666"]},{"raw_affiliation_string":"Department of Biomedical Informatics, Emory University, Atlanta, GA, USA","institution_ids":["https://openalex.org/I150468666"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5029856761"],"corresponding_institution_ids":["https://openalex.org/I150468666"],"apc_list":null,"apc_paid":null,"fwci":0.5547,"has_fulltext":false,"cited_by_count":25,"citation_normalized_percentile":{"value":0.75764308,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"2017","issue":null,"first_page":"424","last_page":"428"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10531","display_name":"Advanced Vision and Imaging","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7783970832824707},{"id":"https://openalex.org/keywords/image-registration","display_name":"Image registration","score":0.6853414177894592},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.6805689334869385},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6153682470321655},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.2170032262802124}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7783970832824707},{"id":"https://openalex.org/C166704113","wikidata":"https://www.wikidata.org/wiki/Q861092","display_name":"Image registration","level":3,"score":0.6853414177894592},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.6805689334869385},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6153682470321655},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.2170032262802124}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/isbi.2017.7950552","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi.2017.7950552","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2017 IEEE 14th International Symposium on Biomedical Imaging (ISBI 2017)","raw_type":"proceedings-article"},{"id":"pmid:28804569","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28804569","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings. IEEE International Symposium on Biomedical Imaging","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:5550903","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5550903","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc IEEE Int Symp Biomed Imaging","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:5550903","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5550903","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc IEEE Int Symp Biomed Imaging","raw_type":"Text"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.46000000834465027,"display_name":"Partnerships for the goals"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":27,"referenced_works":["https://openalex.org/W363173866","https://openalex.org/W1558627588","https://openalex.org/W1600937264","https://openalex.org/W1656766859","https://openalex.org/W1977653087","https://openalex.org/W1980971505","https://openalex.org/W1985586071","https://openalex.org/W1993487882","https://openalex.org/W1996883058","https://openalex.org/W2000601094","https://openalex.org/W2064146386","https://openalex.org/W2074079901","https://openalex.org/W2078237160","https://openalex.org/W2085586012","https://openalex.org/W2113576511","https://openalex.org/W2121075186","https://openalex.org/W2129002068","https://openalex.org/W2139714314","https://openalex.org/W2147555557","https://openalex.org/W2151103935","https://openalex.org/W2186132424","https://openalex.org/W2344147939","https://openalex.org/W2398853931","https://openalex.org/W4253680483","https://openalex.org/W6679427492","https://openalex.org/W6687141033","https://openalex.org/W7016150859"],"related_works":["https://openalex.org/W2058170566","https://openalex.org/W2755342338","https://openalex.org/W2772917594","https://openalex.org/W2775347418","https://openalex.org/W2166024367","https://openalex.org/W3116076068","https://openalex.org/W2229312674","https://openalex.org/W2951359407","https://openalex.org/W2079911747","https://openalex.org/W1969923398"],"abstract_inverted_index":{"High-throughput":[0],"serial":[1,23,65,77],"histology":[2,103],"imaging":[3,26],"provides":[4],"a":[5,16,28,50],"new":[6,29],"avenue":[7],"for":[8,101],"the":[9,20,33,38,92],"routine":[10],"study":[11],"of":[12,22,41,76,94],"micro-anatomical":[13],"structures":[14],"in":[15],"3D":[17,102],"space.":[18],"However,":[19],"emergence":[21],"whole":[24,66],"slide":[25,67],"poses":[27],"registration":[30,43,52],"challenge,":[31],"as":[32],"gigapixel":[34,74],"image":[35,83],"size":[36],"precludes":[37],"direct":[39],"application":[40],"conventional":[42],"techniques.":[44],"In":[45],"this":[46],"paper,":[47],"we":[48],"develop":[49],"three-stage":[51],"with":[53,73],"multi-resolution":[54],"mapping":[55],"and":[56,81,87,97],"propagation":[57],"method":[58],"to":[59],"dynamically":[60],"produce":[61],"registered":[62],"subvolumes":[63],"from":[64],"images.":[68],"We":[69],"validate":[70],"our":[71,95],"algorithm":[72],"images":[75],"brain":[78],"tumor":[79],"sections":[80],"synthetic":[82],"volumes.":[84],"The":[85],"qualitative":[86],"quantitative":[88],"assessment":[89],"results":[90],"demonstrate":[91],"efficacy":[93],"approach":[96],"suggest":[98],"its":[99],"promise":[100],"reconstruction":[104],"analysis.":[105]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}