{"id":"https://openalex.org/W2000270594","doi":"https://doi.org/10.1109/isbi.2014.6867871","title":"Head tracking and flagellum tracing for sperm motility analysis","display_name":"Head tracking and flagellum tracing for sperm motility analysis","publication_year":2014,"publication_date":"2014-04-01","ids":{"openalex":"https://openalex.org/W2000270594","doi":"https://doi.org/10.1109/isbi.2014.6867871","mag":"2000270594"},"language":"en","primary_location":{"id":"doi:10.1109/isbi.2014.6867871","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi.2014.6867871","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 IEEE 11th International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"},"type":"preprint","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5040953451","display_name":"Hui\u2010Fang Yang","orcid":"https://orcid.org/0000-0001-6400-0462"},"institutions":[{"id":"https://openalex.org/I201841394","display_name":"Universit\u00e9 C\u00f4te d'Azur","ror":"https://ror.org/019tgvf94","country_code":"FR","type":"education","lineage":["https://openalex.org/I201841394"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"H.-F. Yang","raw_affiliation_strings":["MORPHEME, IBV, France","Univ. Nice Sophia Antipolis, UMR 7271, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MORPHEME, IBV, France","institution_ids":[]},{"raw_affiliation_string":"Univ. Nice Sophia Antipolis, UMR 7271, France","institution_ids":["https://openalex.org/I201841394"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106126872","display_name":"Xavier Descombes","orcid":"https://orcid.org/0000-0002-7611-6021"},"institutions":[{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"X. Descombes","raw_affiliation_strings":["INRIA, France","MORPHEME, IBV, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"INRIA, France","institution_ids":["https://openalex.org/I1326498283"]},{"raw_affiliation_string":"MORPHEME, IBV, France","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046724319","display_name":"St\u00e9phanie Prigent","orcid":null},"institutions":[{"id":"https://openalex.org/I201841394","display_name":"Universit\u00e9 C\u00f4te d'Azur","ror":"https://ror.org/019tgvf94","country_code":"FR","type":"education","lineage":["https://openalex.org/I201841394"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"S. Prigent","raw_affiliation_strings":["MORPHEME, IBV, France","Univ. Nice Sophia Antipolis, UMR 7277, Nice, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MORPHEME, IBV, France","institution_ids":[]},{"raw_affiliation_string":"Univ. Nice Sophia Antipolis, UMR 7277, Nice, France","institution_ids":["https://openalex.org/I201841394"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035428636","display_name":"Gr\u00e9goire Malandain","orcid":"https://orcid.org/0000-0002-4559-1575"},"institutions":[{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"G. Malandain","raw_affiliation_strings":["INRIA, France","MORPHEME, IBV, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"INRIA, France","institution_ids":["https://openalex.org/I1326498283"]},{"raw_affiliation_string":"MORPHEME, IBV, France","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071685704","display_name":"Xavier Druart","orcid":"https://orcid.org/0000-0001-8396-139X"},"institutions":[{"id":"https://openalex.org/I110017253","display_name":"Universit\u00e9 de Tours","ror":"https://ror.org/02wwzvj46","country_code":"FR","type":"education","lineage":["https://openalex.org/I110017253"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"X. Druart","raw_affiliation_strings":["INRA, Universit\u00e9 de Tours-Haras Nationaux, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"INRA, Universit\u00e9 de Tours-Haras Nationaux, France","institution_ids":["https://openalex.org/I110017253"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5015076918","display_name":"Franck Plourabou\u00e9","orcid":"https://orcid.org/0000-0003-0349-4221"},"institutions":[{"id":"https://openalex.org/I205747304","display_name":"Institut National Polytechnique de Toulouse","ror":"https://ror.org/033p9g875","country_code":"FR","type":"education","lineage":["https://openalex.org/I205747304","https://openalex.org/I4405258862"]},{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555","https://openalex.org/I4405258862"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"F. Plouraboue","raw_affiliation_strings":["UPS, INPT, Toulouse, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"UPS, INPT, Toulouse, France","institution_ids":["https://openalex.org/I205747304","https://openalex.org/I134560555"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5040953451"],"corresponding_institution_ids":["https://openalex.org/I201841394"],"apc_list":null,"apc_paid":null,"fwci":4.3562,"has_fulltext":false,"cited_by_count":23,"citation_normalized_percentile":{"value":0.93126644,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"310","last_page":"313"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10116","display_name":"Sperm and Testicular Function","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/2743","display_name":"Reproductive Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10116","display_name":"Sperm and Testicular Function","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/2743","display_name":"Reproductive Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10364","display_name":"Reproductive Biology and Fertility","score":0.9914000034332275,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10699","display_name":"Primate Behavior and Ecology","score":0.9682999849319458,"subfield":{"id":"https://openalex.org/subfields/3207","display_name":"Social Psychology"},"field":{"id":"https://openalex.org/fields/32","display_name":"Psychology"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/flagellum","display_name":"Flagellum","score":0.7990256547927856},{"id":"https://openalex.org/keywords/sperm-motility","display_name":"Sperm motility","score":0.643044114112854},{"id":"https://openalex.org/keywords/sperm","display_name":"Sperm","score":0.6349974274635315},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.6117944717407227},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6033780574798584},{"id":"https://openalex.org/keywords/tracing","display_name":"Tracing","score":0.5862455368041992},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.557691216468811},{"id":"https://openalex.org/keywords/motility","display_name":"Motility","score":0.5070116519927979},{"id":"https://openalex.org/keywords/tracking","display_name":"Tracking (education)","score":0.45678505301475525},{"id":"https://openalex.org/keywords/head","display_name":"Head (geology)","score":0.4417811930179596},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3412552773952484},{"id":"https://openalex.org/keywords/anatomy","display_name":"Anatomy","score":0.3407227396965027},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.11007723212242126},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.10490745306015015},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10363185405731201}],"concepts":[{"id":"https://openalex.org/C115811362","wikidata":"https://www.wikidata.org/wiki/Q189998","display_name":"Flagellum","level":3,"score":0.7990256547927856},{"id":"https://openalex.org/C2777632594","wikidata":"https://www.wikidata.org/wiki/Q27116486","display_name":"Sperm motility","level":3,"score":0.643044114112854},{"id":"https://openalex.org/C2781087480","wikidata":"https://www.wikidata.org/wiki/Q17145","display_name":"Sperm","level":2,"score":0.6349974274635315},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.6117944717407227},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6033780574798584},{"id":"https://openalex.org/C138673069","wikidata":"https://www.wikidata.org/wiki/Q322229","display_name":"Tracing","level":2,"score":0.5862455368041992},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.557691216468811},{"id":"https://openalex.org/C58207958","wikidata":"https://www.wikidata.org/wiki/Q33596","display_name":"Motility","level":2,"score":0.5070116519927979},{"id":"https://openalex.org/C2775936607","wikidata":"https://www.wikidata.org/wiki/Q466845","display_name":"Tracking (education)","level":2,"score":0.45678505301475525},{"id":"https://openalex.org/C2780312720","wikidata":"https://www.wikidata.org/wiki/Q5689100","display_name":"Head (geology)","level":2,"score":0.4417811930179596},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3412552773952484},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.3407227396965027},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.11007723212242126},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.10490745306015015},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10363185405731201},{"id":"https://openalex.org/C19417346","wikidata":"https://www.wikidata.org/wiki/Q7922","display_name":"Pedagogy","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/isbi.2014.6867871","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi.2014.6867871","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 IEEE 11th International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"},{"id":"pmh:oai:HAL:hal-00909868v2","is_oa":false,"landing_page_url":"https://inria.hal.science/hal-00909868","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://hal.inria.fr/docs/00/91/81/73/PDF/isbi14.pdf","raw_type":"Conference papers"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.5299999713897705}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":12,"referenced_works":["https://openalex.org/W1871230255","https://openalex.org/W2031644602","https://openalex.org/W2035828874","https://openalex.org/W2036122340","https://openalex.org/W2103797153","https://openalex.org/W2138629102","https://openalex.org/W2145803225","https://openalex.org/W2148738716","https://openalex.org/W2159902645","https://openalex.org/W2400161107","https://openalex.org/W6639284656","https://openalex.org/W6712801613"],"related_works":["https://openalex.org/W2069725293","https://openalex.org/W2139076382","https://openalex.org/W3013631948","https://openalex.org/W2808180303","https://openalex.org/W2054219985","https://openalex.org/W1510590961","https://openalex.org/W756125583","https://openalex.org/W2472724616","https://openalex.org/W3006367093","https://openalex.org/W2376372885"],"abstract_inverted_index":{"Sperm":[0],"quality":[1,72],"assessment":[2],"plays":[3],"an":[4],"essential":[5],"role":[6],"in":[7,70],"human":[8],"fertility":[9],"and":[10,17,21,56,84,99,138],"animal":[11],"breeding.":[12],"Manual":[13],"analysis":[14,27,38],"is":[15,121],"time-consuming":[16],"subject":[18],"to":[19,32,106,123],"intra-":[20],"inter-observer":[22],"variability.":[23],"To":[24],"automate":[25],"the":[26,54,58,66,92,96,100,104,107,113,125,135,139,163,189,196],"process,":[28],"as":[29,31],"well":[30],"offer":[33],"a":[34,49,117],"means":[35],"of":[36,65,77,176,198],"statistical":[37],"that":[39,52,156,180],"may":[40],"not":[41],"be":[42],"achieved":[43],"by":[44],"visual":[45],"inspection,":[46],"we":[47],"present":[48],"computational":[50],"framework":[51,75,130,169],"tracks":[53],"heads":[55,94,102],"traces":[57],"tails":[59],"for":[60,111,143],"analyzing":[61],"sperm":[62,93,146,158],"motility,":[63],"one":[64],"most":[67],"important":[68],"attributes":[69],"semen":[71,178],"evaluation.":[73],"Our":[74,129],"consists":[76],"3":[78],"modules:":[79],"head":[80,82,88,108,114,136,164],"detection,":[81],"tracking,":[83],"flagellum":[85,118],"tracing.":[86],"The":[87,193],"detection":[89],"module":[90,110],"detects":[91],"from":[95,152],"image":[97,174],"data,":[98],"detected":[101],"are":[103],"inputs":[105],"tracking":[109],"obtaining":[112],"trajectories.":[115,165],"Finally,":[116],"tracing":[119],"algorithm":[120],"proposed":[122],"obtain":[124],"flagellar":[126,140],"beat":[127,141],"patterns.":[128],"aims":[131],"at":[132,183,187],"providing":[133],"both":[134],"trajectories":[137],"patterns":[142],"quantitatively":[144],"assessing":[145],"motility.":[147],"This":[148],"distinguishes":[149],"our":[150,168,199],"work":[151],"other":[153],"existing":[154],"methods":[155],"analyze":[157],"motility":[159],"based":[160],"merely":[161],"on":[162],"We":[166],"validate":[167],"using":[170],"two":[171,184],"confocal":[172],"microscopy":[173],"sequences":[175],"ram":[177],"samples":[179],"were":[181],"imaged":[182],"different":[185],"conditions,":[186],"which":[188],"sperms":[190],"behave":[191],"differently.":[192],"results":[194],"show":[195],"effectiveness":[197],"framework.":[200]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":2}],"updated_date":"2026-05-07T13:39:58.223016","created_date":"2025-10-10T00:00:00"}