{"id":"https://openalex.org/W2091833029","doi":"https://doi.org/10.1109/isbi.2013.6556515","title":"Deformable registration of macular oct using a-mode scan similarity","display_name":"Deformable registration of macular oct using a-mode scan similarity","publication_year":2013,"publication_date":"2013-04-01","ids":{"openalex":"https://openalex.org/W2091833029","doi":"https://doi.org/10.1109/isbi.2013.6556515","mag":"2091833029","pmid":"https://pubmed.ncbi.nlm.nih.gov/24443687"},"language":"en","primary_location":{"id":"doi:10.1109/isbi.2013.6556515","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi.2013.6556515","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2013 IEEE 10th International Symposium on Biomedical Imaging","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3892764","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100337209","display_name":"Min Chen","orcid":"https://orcid.org/0000-0002-0960-4447"},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Min Chen","raw_affiliation_strings":["Image Analysis and Communications Laboratory, The Johns Hopkins University","Image Anal. & Commun. Lab., Johns Hopkins Univ., Baltimore, MD, USA"],"affiliations":[{"raw_affiliation_string":"Image Analysis and Communications Laboratory, The Johns Hopkins University","institution_ids":["https://openalex.org/I145311948"]},{"raw_affiliation_string":"Image Anal. & Commun. Lab., Johns Hopkins Univ., Baltimore, MD, USA","institution_ids":["https://openalex.org/I145311948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103480360","display_name":"Andrew Lang","orcid":null},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrew Lang","raw_affiliation_strings":["Image Analysis and Communications Laboratory, The Johns Hopkins University","Image Anal. & Commun. Lab., Johns Hopkins Univ., Baltimore, MD, USA"],"affiliations":[{"raw_affiliation_string":"Image Analysis and Communications Laboratory, The Johns Hopkins University","institution_ids":["https://openalex.org/I145311948"]},{"raw_affiliation_string":"Image Anal. & Commun. Lab., Johns Hopkins Univ., Baltimore, MD, USA","institution_ids":["https://openalex.org/I145311948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059547398","display_name":"Elias S. Sotirchos","orcid":"https://orcid.org/0000-0002-8812-1637"},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Elias Sotirchos","raw_affiliation_strings":["Department of Neurology, The Johns Hopkins School of Medicine","Sch. of Med., Dept. of Neurology, Johns Hopkins Univ., Baltimore, MD, USA"],"affiliations":[{"raw_affiliation_string":"Department of Neurology, The Johns Hopkins School of Medicine","institution_ids":[]},{"raw_affiliation_string":"Sch. of Med., Dept. of Neurology, Johns Hopkins Univ., Baltimore, MD, USA","institution_ids":["https://openalex.org/I145311948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108447802","display_name":"Howard S. Ying","orcid":null},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Howard S. Ying","raw_affiliation_strings":["The Wilmer Eye Institute, The Johns Hopkins Hospital","Wilmer Eye Inst., Johns Hopkins Hosp., Baltimore, MD, USA"],"affiliations":[{"raw_affiliation_string":"The Wilmer Eye Institute, The Johns Hopkins Hospital","institution_ids":[]},{"raw_affiliation_string":"Wilmer Eye Inst., Johns Hopkins Hosp., Baltimore, MD, USA","institution_ids":["https://openalex.org/I145311948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061851273","display_name":"Peter A. Calabresi","orcid":"https://orcid.org/0000-0002-7776-6472"},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Peter A. Calabresi","raw_affiliation_strings":["Department of Neurology, The Johns Hopkins School of Medicine","Sch. of Med., Dept. of Neurology, Johns Hopkins Univ., Baltimore, MD, USA"],"affiliations":[{"raw_affiliation_string":"Department of Neurology, The Johns Hopkins School of Medicine","institution_ids":[]},{"raw_affiliation_string":"Sch. of Med., Dept. of Neurology, Johns Hopkins Univ., Baltimore, MD, USA","institution_ids":["https://openalex.org/I145311948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066682675","display_name":"Jerry L. Prince","orcid":"https://orcid.org/0000-0002-6553-0876"},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jerry L. Prince","raw_affiliation_strings":["Image Analysis and Communications Laboratory, The Johns Hopkins University","Image Anal. & Commun. Lab., Johns Hopkins Univ., Baltimore, MD, USA"],"affiliations":[{"raw_affiliation_string":"Image Analysis and Communications Laboratory, The Johns Hopkins University","institution_ids":["https://openalex.org/I145311948"]},{"raw_affiliation_string":"Image Anal. & Commun. Lab., Johns Hopkins Univ., Baltimore, MD, USA","institution_ids":["https://openalex.org/I145311948"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5075622613","display_name":"Aaron Carass","orcid":"https://orcid.org/0000-0003-4939-5085"},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Aaron Carass","raw_affiliation_strings":["Image Analysis and Communications Laboratory, The Johns Hopkins University","Image Anal. & Commun. Lab., Johns Hopkins Univ., Baltimore, MD, USA"],"affiliations":[{"raw_affiliation_string":"Image Analysis and Communications Laboratory, The Johns Hopkins University","institution_ids":["https://openalex.org/I145311948"]},{"raw_affiliation_string":"Image Anal. & Commun. Lab., Johns Hopkins Univ., Baltimore, MD, USA","institution_ids":["https://openalex.org/I145311948"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5100337209"],"corresponding_institution_ids":["https://openalex.org/I145311948"],"apc_list":null,"apc_paid":null,"fwci":1.8622,"has_fulltext":false,"cited_by_count":14,"citation_normalized_percentile":{"value":0.84936284,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"2013","issue":null,"first_page":"476","last_page":"479"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11438","display_name":"Retinal Imaging and Analysis","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11438","display_name":"Retinal Imaging and Analysis","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11569","display_name":"Optical Coherence Tomography Applications","score":0.9958999752998352,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9912999868392944,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.7265620231628418},{"id":"https://openalex.org/keywords/image-registration","display_name":"Image registration","score":0.7224512696266174},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7202517986297607},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.6275280117988586},{"id":"https://openalex.org/keywords/affine-transformation","display_name":"Affine transformation","score":0.6114877462387085},{"id":"https://openalex.org/keywords/optical-coherence-tomography","display_name":"Optical coherence tomography","score":0.5548082590103149},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.5405617356300354},{"id":"https://openalex.org/keywords/retinal","display_name":"Retinal","score":0.4787815809249878},{"id":"https://openalex.org/keywords/retina","display_name":"Retina","score":0.41884058713912964},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.36631762981414795},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.16026604175567627},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.11441943049430847},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.11103382706642151},{"id":"https://openalex.org/keywords/ophthalmology","display_name":"Ophthalmology","score":0.1045377254486084},{"id":"https://openalex.org/keywords/optics","display_name":"Optics","score":0.07975921034812927}],"concepts":[{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.7265620231628418},{"id":"https://openalex.org/C166704113","wikidata":"https://www.wikidata.org/wiki/Q861092","display_name":"Image registration","level":3,"score":0.7224512696266174},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7202517986297607},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.6275280117988586},{"id":"https://openalex.org/C92757383","wikidata":"https://www.wikidata.org/wiki/Q382497","display_name":"Affine transformation","level":2,"score":0.6114877462387085},{"id":"https://openalex.org/C2778818243","wikidata":"https://www.wikidata.org/wiki/Q899552","display_name":"Optical coherence tomography","level":2,"score":0.5548082590103149},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.5405617356300354},{"id":"https://openalex.org/C2780827179","wikidata":"https://www.wikidata.org/wiki/Q422001","display_name":"Retinal","level":2,"score":0.4787815809249878},{"id":"https://openalex.org/C2777093970","wikidata":"https://www.wikidata.org/wiki/Q169342","display_name":"Retina","level":2,"score":0.41884058713912964},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.36631762981414795},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.16026604175567627},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.11441943049430847},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.11103382706642151},{"id":"https://openalex.org/C118487528","wikidata":"https://www.wikidata.org/wiki/Q161437","display_name":"Ophthalmology","level":1,"score":0.1045377254486084},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.07975921034812927},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1109/isbi.2013.6556515","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi.2013.6556515","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2013 IEEE 10th International Symposium on Biomedical Imaging","raw_type":"proceedings-article"},{"id":"pmid:24443687","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24443687","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings. IEEE International Symposium on Biomedical Imaging","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.724.2355","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.724.2355","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://iacl.ece.jhu.edu//proceedings/iacl/2013/ChexISBI13-Macular_OCT_using_A-mode_scan_similarity.pdf","raw_type":"text"},{"id":"pmh:oai:europepmc.org:2878470","is_oa":false,"landing_page_url":"http://europepmc.org/articles/PMC3892764","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3892764","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3892764","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc IEEE Int Symp Biomed Imaging","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:3892764","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3892764","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc IEEE Int Symp Biomed Imaging","raw_type":"Text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":6,"referenced_works":["https://openalex.org/W1970928383","https://openalex.org/W2000278813","https://openalex.org/W2006175679","https://openalex.org/W2099869863","https://openalex.org/W2121014637","https://openalex.org/W2142568997"],"related_works":["https://openalex.org/W1014602304","https://openalex.org/W1033756233","https://openalex.org/W2119498694","https://openalex.org/W1977334515","https://openalex.org/W2037746501","https://openalex.org/W2093210804","https://openalex.org/W1993625448","https://openalex.org/W1967071448","https://openalex.org/W2089006188","https://openalex.org/W1563182311"],"abstract_inverted_index":{"Optical":[0],"coherence":[1],"tomography":[2],"(OCT)":[3],"of":[4,24,29,44,55,91,114,146,153],"the":[5,27,39,42,87,116,135,143,154,166],"macular":[6],"cube":[7],"has":[8],"become":[9],"an":[10,36],"increasingly":[11],"important":[12,21],"tool":[13],"for":[14,83,161,172],"investigating":[15],"and":[16,111],"managing":[17],"retinal":[18,72,96,136,173],"pathology.":[19],"One":[20],"new":[22,79],"area":[23],"investigation":[25],"is":[26,49,101,130],"analysis":[28,37],"anatomic":[30],"variably":[31],"across":[32],"a":[33,45,59,78,95,121],"population.":[34],"Such":[35],"on":[38,139],"retina":[40],"requires":[41],"construction":[43],"normalized":[46],"space,":[47],"which":[48,103],"generally":[50],"created":[51],"through":[52],"deformable":[53,80,122],"registration":[54,65,81,123,160],"each":[56],"subject":[57],"into":[58],"common":[60],"template.":[61],"Unfortunately,":[62],"state-of-the-art":[63],"3D":[64],"tools":[66],"fail":[67],"to":[68,107,132,151,159,168],"adequately":[69],"spatially":[70],"normalize":[71],"OCT":[73,84,97],"images.":[74],"This":[75],"work":[76],"proposes":[77],"algorithm":[82],"images":[85],"using":[86,124],"similarity":[88],"between":[89],"pairs":[90],"A-mode":[92,118],"scans.":[93,119],"First,":[94],"specific":[98],"affine":[99],"step":[100],"presented,":[102],"uses":[104],"automated":[105],"landmarks":[106],"perform":[108],"global":[109],"translations":[110],"individual":[112],"rescaling":[113],"all":[115],"subject's":[117],"Then,":[120],"regularized":[125],"one-dimensional":[126],"radial":[127],"basis":[128],"functions":[129],"applied":[131],"further":[133],"align":[134],"layers.":[137],"Results":[138],"15":[140],"subjects":[141],"show":[142,165],"improved":[144],"accuracy":[145],"this":[147],"approach":[148],"in":[149],"comparison":[150],"state":[152],"art":[155],"methods":[156],"with":[157],"respect":[158],"labeling.":[162],"Additional":[163],"results":[164],"ability":[167],"generate":[169],"stereotaxic":[170],"spaces":[171],"OCT.":[174]},"counts_by_year":[{"year":2023,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":4}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
