{"id":"https://openalex.org/W2069283147","doi":"https://doi.org/10.1109/isbi.2012.6235848","title":"Automatic airway analysis for genome-wide association studies in COPD","display_name":"Automatic airway analysis for genome-wide association studies in COPD","publication_year":2012,"publication_date":"2012-05-01","ids":{"openalex":"https://openalex.org/W2069283147","doi":"https://doi.org/10.1109/isbi.2012.6235848","mag":"2069283147","pmid":"https://pubmed.ncbi.nlm.nih.gov/23744052"},"language":"en","primary_location":{"id":"doi:10.1109/isbi.2012.6235848","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi.2012.6235848","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 9th IEEE International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5002685368","display_name":"Ra\u00fal San Jo\u015be Est\u00e9par","orcid":"https://orcid.org/0000-0002-3677-1996"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Raul San Jose Estepar","raw_affiliation_strings":["Brigham and Women's Hospital, Boston, MA","Brigham and Women's Hospital, Boston MA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Brigham and Women's Hospital, Boston, MA","institution_ids":["https://openalex.org/I1283280774"]},{"raw_affiliation_string":"Brigham and Women's Hospital, Boston MA#TAB#","institution_ids":["https://openalex.org/I1283280774"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062538082","display_name":"James C. Ross","orcid":"https://orcid.org/0000-0002-2338-3644"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"James C. Ross","raw_affiliation_strings":["Brigham and Women's Hospital, Boston, MA, USA","Brigham and Women's Hospital, Boston MA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Brigham and Women's Hospital, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774"]},{"raw_affiliation_string":"Brigham and Women's Hospital, Boston MA#TAB#","institution_ids":["https://openalex.org/I1283280774"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045224825","display_name":"Gordon Kindlmann","orcid":null},"institutions":[{"id":"https://openalex.org/I39422238","display_name":"University of Illinois Chicago","ror":"https://ror.org/02mpq6x41","country_code":"US","type":"education","lineage":["https://openalex.org/I39422238"]},{"id":"https://openalex.org/I40347166","display_name":"University of Chicago","ror":"https://ror.org/024mw5h28","country_code":"US","type":"education","lineage":["https://openalex.org/I40347166"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gordon L. Kindlmann","raw_affiliation_strings":["University of Chicago, Chicago, IL, USA","University of Chicago, Chicago, IL"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Chicago, Chicago, IL, USA","institution_ids":["https://openalex.org/I39422238","https://openalex.org/I40347166"]},{"raw_affiliation_string":"University of Chicago, Chicago, IL","institution_ids":["https://openalex.org/I40347166"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026585250","display_name":"Alejandro A. D\u00edaz","orcid":"https://orcid.org/0000-0001-5037-2919"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alejandro Diaz","raw_affiliation_strings":["Brigham and Women's Hospital, Boston, MA, USA","Brigham and Women's Hospital, Boston MA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Brigham and Women's Hospital, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774"]},{"raw_affiliation_string":"Brigham and Women's Hospital, Boston MA#TAB#","institution_ids":["https://openalex.org/I1283280774"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103161009","display_name":"Yuka Okajima","orcid":"https://orcid.org/0000-0002-8306-1436"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yuka Okajima","raw_affiliation_strings":["Brigham and Women's Hospital, Boston, MA, USA","Brigham and Women's Hospital, Boston MA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Brigham and Women's Hospital, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774"]},{"raw_affiliation_string":"Brigham and Women's Hospital, Boston MA#TAB#","institution_ids":["https://openalex.org/I1283280774"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012263767","display_name":"Ron Kikinis","orcid":"https://orcid.org/0000-0001-7227-7058"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ron Kikinis","raw_affiliation_strings":["Brigham and Women's Hospital, Boston, MA, USA","Brigham and Women's Hospital, Boston MA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Brigham and Women's Hospital, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774"]},{"raw_affiliation_string":"Brigham and Women's Hospital, Boston MA#TAB#","institution_ids":["https://openalex.org/I1283280774"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110257712","display_name":"Carl\u2010Fredrik Westin","orcid":null},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Carl-Fredrik Westin","raw_affiliation_strings":["Brigham and Women's Hospital, Boston, MA, USA","Brigham and Women's Hospital, Boston MA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Brigham and Women's Hospital, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774"]},{"raw_affiliation_string":"Brigham and Women's Hospital, Boston MA#TAB#","institution_ids":["https://openalex.org/I1283280774"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035524361","display_name":"Edwin K. Silverman","orcid":"https://orcid.org/0000-0002-3641-3822"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Edwin K. Silverman","raw_affiliation_strings":["Brigham and Women's Hospital, Boston, MA, USA","Brigham and Women's Hospital, Boston MA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Brigham and Women's Hospital, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774"]},{"raw_affiliation_string":"Brigham and Women's Hospital, Boston MA#TAB#","institution_ids":["https://openalex.org/I1283280774"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5062180910","display_name":"George Washko","orcid":null},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"George G. Washko","raw_affiliation_strings":["Brigham and Women's Hospital, Boston, MA, USA","Brigham and Women's Hospital, Boston MA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Brigham and Women's Hospital, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774"]},{"raw_affiliation_string":"Brigham and Women's Hospital, Boston MA#TAB#","institution_ids":["https://openalex.org/I1283280774"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":3.9147,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.90935115,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"1467","last_page":"1470"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10143","display_name":"Chronic Obstructive Pulmonary Disease (COPD) Research","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10143","display_name":"Chronic Obstructive Pulmonary Disease (COPD) Research","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/airway","display_name":"Airway","score":0.7201501727104187},{"id":"https://openalex.org/keywords/copd","display_name":"COPD","score":0.590142011642456},{"id":"https://openalex.org/keywords/genome-wide-association-study","display_name":"Genome-wide association study","score":0.5858427286148071},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.4872254431247711},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.39395272731781006},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.28005552291870117},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.21517083048820496},{"id":"https://openalex.org/keywords/surgery","display_name":"Surgery","score":0.12188398838043213},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.10002890229225159},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09547105431556702},{"id":"https://openalex.org/keywords/single-nucleotide-polymorphism","display_name":"Single-nucleotide polymorphism","score":0.08618304133415222}],"concepts":[{"id":"https://openalex.org/C105922876","wikidata":"https://www.wikidata.org/wiki/Q1423981","display_name":"Airway","level":2,"score":0.7201501727104187},{"id":"https://openalex.org/C2776780178","wikidata":"https://www.wikidata.org/wiki/Q199804","display_name":"COPD","level":2,"score":0.590142011642456},{"id":"https://openalex.org/C106208931","wikidata":"https://www.wikidata.org/wiki/Q1098876","display_name":"Genome-wide association study","level":5,"score":0.5858427286148071},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.4872254431247711},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.39395272731781006},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.28005552291870117},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.21517083048820496},{"id":"https://openalex.org/C141071460","wikidata":"https://www.wikidata.org/wiki/Q40821","display_name":"Surgery","level":1,"score":0.12188398838043213},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.10002890229225159},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09547105431556702},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.08618304133415222},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/isbi.2012.6235848","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi.2012.6235848","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 9th IEEE International Symposium on Biomedical Imaging (ISBI)","raw_type":"proceedings-article"},{"id":"pmid:23744052","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23744052","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings. IEEE International Symposium on Biomedical Imaging","raw_type":null},{"id":"pmh:oai:europepmc.org:2669429","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3670103","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.8399999737739563}],"awards":[{"id":"https://openalex.org/G2644038179","display_name":null,"funder_award_id":"U01 HL089897","funder_id":"https://openalex.org/F4320337338","funder_display_name":"National Heart, Lung, and Blood Institute"},{"id":"https://openalex.org/G3074978538","display_name":null,"funder_award_id":"K23 HL089353","funder_id":"https://openalex.org/F4320337338","funder_display_name":"National Heart, Lung, and Blood Institute"},{"id":"https://openalex.org/G5861375725","display_name":null,"funder_award_id":"U01 HL089856","funder_id":"https://openalex.org/F4320337338","funder_display_name":"National Heart, Lung, and Blood Institute"},{"id":"https://openalex.org/G5967600711","display_name":null,"funder_award_id":"K25 HL104085","funder_id":"https://openalex.org/F4320337338","funder_display_name":"National Heart, Lung, and Blood Institute"}],"funders":[{"id":"https://openalex.org/F4320337338","display_name":"National Heart, Lung, and Blood Institute","ror":"https://ror.org/012pb6c26"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":7,"referenced_works":["https://openalex.org/W1964806616","https://openalex.org/W1988977196","https://openalex.org/W2082907106","https://openalex.org/W2107876242","https://openalex.org/W2130384788","https://openalex.org/W2140775860","https://openalex.org/W2167794938"],"related_works":["https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W3031052312","https://openalex.org/W3032375762","https://openalex.org/W1995515455","https://openalex.org/W2080531066","https://openalex.org/W3108674512","https://openalex.org/W1506200166","https://openalex.org/W2048182022","https://openalex.org/W2139131213"],"abstract_inverted_index":{"We":[0,27,128],"present":[1,135],"an":[2,97],"image":[3],"pipeline":[4],"for":[5,10,118,140],"airway":[6,35,63,93,111,119,131],"phenotype":[7],"extraction":[8,132],"suitable":[9],"large-scale":[11],"genetic":[12],"and":[13,70,124,134],"epidemiological":[14],"studies":[15,19],"including":[16],"genome-wide":[17],"association":[18,142],"(GWAS)":[20],"in":[21,37,58,66,137],"Chronic":[22],"Obstructive":[23],"Pulmonary":[24],"Disease":[25],"(COPD).":[26],"use":[28,87],"scale-space":[29],"particles":[30],"to":[31,81,91],"densely":[32],"sample":[33],"intraparenchymal":[34],"locations":[36,90],"a":[38,51,59],"large":[39],"cohort":[40],"of":[41,61,104,143,156],"high-resolution":[42],"CT":[43],"scans.":[44],"The":[45],"particle":[46,89],"methodology":[47],"is":[48],"based":[49,100],"on":[50,101],"constrained":[52],"energy":[53],"minimization":[54],"problem":[55],"that":[56,150],"results":[57,136],"set":[60],"candidate":[62],"points":[64,73],"situated":[65],"both":[67],"physical":[68],"space":[69],"scale.":[71],"Those":[72],"are":[74],"further":[75],"clustered":[76],"using":[77,96],"connected":[78],"components":[79],"filtering":[80],"increase":[82],"their":[83],"specificity.":[84],"Finally,":[85],"we":[86,114],"the":[88,102,105,110,130,141,144,157],"perform":[92],"wall":[94,112,121],"detection":[95],"edge":[98],"detector":[99],"zero-crossing":[103],"second":[106],"order":[107],"derivative.":[108],"Given":[109],"locations,":[113],"compute":[115],"three":[116],"phenotypes":[117,146],"disease:":[120],"thickening":[122],"(Pi10,WA%)":[123],"luminal":[125],"remodeling":[126],"(P%).":[127],"validate":[129],"technique":[133],"2,500":[138],"scans":[139],"extracted":[145],"with":[147],"clinical":[148],"outcomes":[149],"will":[151],"be":[152],"deployed":[153],"as":[154],"part":[155],"COPDGene":[158],"study":[159],"GWAS":[160],"analysis.":[161]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2018,"cited_by_count":3},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2013,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
