{"id":"https://openalex.org/W2113364578","doi":"https://doi.org/10.1109/isbi.2011.5872714","title":"Morphological signatures and genomic correlates in glioblastoma","display_name":"Morphological signatures and genomic correlates in glioblastoma","publication_year":2011,"publication_date":"2011-03-01","ids":{"openalex":"https://openalex.org/W2113364578","doi":"https://doi.org/10.1109/isbi.2011.5872714","mag":"2113364578","pmid":"https://pubmed.ncbi.nlm.nih.gov/22183148"},"language":"en","primary_location":{"id":"doi:10.1109/isbi.2011.5872714","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi.2011.5872714","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 IEEE International Symposium on Biomedical Imaging: From Nano to Macro","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5034820084","display_name":"Lee Cooper","orcid":"https://orcid.org/0000-0002-3504-4965"},"institutions":[{"id":"https://openalex.org/I150468666","display_name":"Emory University","ror":"https://ror.org/03czfpz43","country_code":"US","type":"education","lineage":["https://openalex.org/I150468666"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Lee A.D. Cooper","raw_affiliation_strings":["Center for Comprehensive Informatics, Emory University, Atlanta, GA 30322","Center for Comprehensive Informatics; Emory University; Atlanta GA 30322 USA"],"affiliations":[{"raw_affiliation_string":"Center for Comprehensive Informatics, Emory University, Atlanta, GA 30322","institution_ids":[]},{"raw_affiliation_string":"Center for Comprehensive Informatics; Emory University; Atlanta GA 30322 USA","institution_ids":["https://openalex.org/I150468666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066949209","display_name":"Jun Kong","orcid":"https://orcid.org/0000-0001-8757-8339"},"institutions":[{"id":"https://openalex.org/I150468666","display_name":"Emory University","ror":"https://ror.org/03czfpz43","country_code":"US","type":"education","lineage":["https://openalex.org/I150468666"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jun Kong","raw_affiliation_strings":["Center for Comprehensive Informatics, Emory University, Atlanta, GA, USA","Center for Comprehensive Informatics; Emory University; Atlanta GA 30322 USA"],"affiliations":[{"raw_affiliation_string":"Center for Comprehensive Informatics, Emory University, Atlanta, GA, USA","institution_ids":["https://openalex.org/I150468666"]},{"raw_affiliation_string":"Center for Comprehensive Informatics; Emory University; Atlanta GA 30322 USA","institution_ids":["https://openalex.org/I150468666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100704639","display_name":"Fusheng Wang","orcid":"https://orcid.org/0000-0002-9369-9361"},"institutions":[{"id":"https://openalex.org/I150468666","display_name":"Emory University","ror":"https://ror.org/03czfpz43","country_code":"US","type":"education","lineage":["https://openalex.org/I150468666"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Fusheng Wang","raw_affiliation_strings":["Center for Comprehensive Informatics, Emory University, Atlanta, GA, USA","Center for Comprehensive Informatics; Emory University; Atlanta GA 30322 USA"],"affiliations":[{"raw_affiliation_string":"Center for Comprehensive Informatics, Emory University, Atlanta, GA, USA","institution_ids":["https://openalex.org/I150468666"]},{"raw_affiliation_string":"Center for Comprehensive Informatics; Emory University; Atlanta GA 30322 USA","institution_ids":["https://openalex.org/I150468666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037383891","display_name":"Tahsin Kur\u00e7","orcid":"https://orcid.org/0000-0001-9237-4306"},"institutions":[{"id":"https://openalex.org/I150468666","display_name":"Emory University","ror":"https://ror.org/03czfpz43","country_code":"US","type":"education","lineage":["https://openalex.org/I150468666"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tahsin Kurc","raw_affiliation_strings":["Center for Comprehensive Informatics, Emory University, Atlanta, GA, USA","Center for Comprehensive Informatics; Emory University; Atlanta GA 30322 USA"],"affiliations":[{"raw_affiliation_string":"Center for Comprehensive Informatics, Emory University, Atlanta, GA, USA","institution_ids":["https://openalex.org/I150468666"]},{"raw_affiliation_string":"Center for Comprehensive Informatics; Emory University; Atlanta GA 30322 USA","institution_ids":["https://openalex.org/I150468666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056719621","display_name":"Carlos S. Moreno","orcid":"https://orcid.org/0000-0002-5582-0028"},"institutions":[{"id":"https://openalex.org/I150468666","display_name":"Emory University","ror":"https://ror.org/03czfpz43","country_code":"US","type":"education","lineage":["https://openalex.org/I150468666"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Carlos S. Moreno","raw_affiliation_strings":["Center for Comprehensive Informatics, Emory University, Atlanta, GA, USA","Department of Pathology & Laboratory Medicine, Emory University, Atlanta, GA, 30322, USA"],"affiliations":[{"raw_affiliation_string":"Center for Comprehensive Informatics, Emory University, Atlanta, GA, USA","institution_ids":["https://openalex.org/I150468666"]},{"raw_affiliation_string":"Department of Pathology & Laboratory Medicine, Emory University, Atlanta, GA, 30322, USA","institution_ids":["https://openalex.org/I150468666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078484855","display_name":"Daniel J. Brat","orcid":"https://orcid.org/0000-0002-0633-6563"},"institutions":[{"id":"https://openalex.org/I150468666","display_name":"Emory University","ror":"https://ror.org/03czfpz43","country_code":"US","type":"education","lineage":["https://openalex.org/I150468666"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel J. Brat","raw_affiliation_strings":["Department of Pathology and Laboratory Medicine, Emory University, Atlanta, GA, USA","Department of Pathology & Laboratory Medicine, Emory University, Atlanta, GA, 30322, USA"],"affiliations":[{"raw_affiliation_string":"Department of Pathology and Laboratory Medicine, Emory University, Atlanta, GA, USA","institution_ids":["https://openalex.org/I150468666"]},{"raw_affiliation_string":"Department of Pathology & Laboratory Medicine, Emory University, Atlanta, GA, 30322, USA","institution_ids":["https://openalex.org/I150468666"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5105466808","display_name":"Joel H. Saltz","orcid":null},"institutions":[{"id":"https://openalex.org/I150468666","display_name":"Emory University","ror":"https://ror.org/03czfpz43","country_code":"US","type":"education","lineage":["https://openalex.org/I150468666"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joel H. Saltz","raw_affiliation_strings":["Center for Comprehensive Informatics, Emory University, Atlanta, GA, USA","Center for Comprehensive Informatics; Emory University; Atlanta GA 30322 USA"],"affiliations":[{"raw_affiliation_string":"Center for Comprehensive Informatics, Emory University, Atlanta, GA, USA","institution_ids":["https://openalex.org/I150468666"]},{"raw_affiliation_string":"Center for Comprehensive Informatics; Emory University; Atlanta GA 30322 USA","institution_ids":["https://openalex.org/I150468666"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5034820084"],"corresponding_institution_ids":["https://openalex.org/I150468666"],"apc_list":null,"apc_paid":null,"fwci":4.1705,"has_fulltext":false,"cited_by_count":22,"citation_normalized_percentile":{"value":0.93381069,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"1624","last_page":"1627"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9900000095367432,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9897000193595886,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/glioblastoma","display_name":"Glioblastoma","score":0.6556545495986938},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6546604037284851},{"id":"https://openalex.org/keywords/phenotype","display_name":"Phenotype","score":0.5069584846496582},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4999687671661377},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.4807988703250885},{"id":"https://openalex.org/keywords/atlas","display_name":"Atlas (anatomy)","score":0.47610530257225037},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.41574251651763916},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.37691134214401245},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.3619583249092102},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.3324342370033264},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2623450756072998},{"id":"https://openalex.org/keywords/cancer-research","display_name":"Cancer research","score":0.1213594377040863},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.10581186413764954},{"id":"https://openalex.org/keywords/anatomy","display_name":"Anatomy","score":0.09626266360282898}],"concepts":[{"id":"https://openalex.org/C2776194525","wikidata":"https://www.wikidata.org/wiki/Q282142","display_name":"Glioblastoma","level":2,"score":0.6556545495986938},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6546604037284851},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.5069584846496582},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4999687671661377},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.4807988703250885},{"id":"https://openalex.org/C2776673561","wikidata":"https://www.wikidata.org/wiki/Q655357","display_name":"Atlas (anatomy)","level":2,"score":0.47610530257225037},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.41574251651763916},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.37691134214401245},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.3619583249092102},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.3324342370033264},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2623450756072998},{"id":"https://openalex.org/C502942594","wikidata":"https://www.wikidata.org/wiki/Q3421914","display_name":"Cancer research","level":1,"score":0.1213594377040863},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.10581186413764954},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.09626266360282898}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/isbi.2011.5872714","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi.2011.5872714","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 IEEE International Symposium on Biomedical Imaging: From Nano to Macro","raw_type":"proceedings-article"},{"id":"pmid:22183148","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22183148","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings. IEEE International Symposium on Biomedical Imaging","raw_type":null},{"id":"pmh:oai:europepmc.org:2246628","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3241612","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":10,"referenced_works":["https://openalex.org/W1548779692","https://openalex.org/W1597336200","https://openalex.org/W1696146867","https://openalex.org/W1974467617","https://openalex.org/W2025183726","https://openalex.org/W2113933145","https://openalex.org/W2138550913","https://openalex.org/W2148830179","https://openalex.org/W2161289668","https://openalex.org/W6635816984"],"related_works":["https://openalex.org/W2011187995","https://openalex.org/W2314146950","https://openalex.org/W2373521488","https://openalex.org/W2803101231","https://openalex.org/W4284509","https://openalex.org/W606911313","https://openalex.org/W4229506690","https://openalex.org/W638747717","https://openalex.org/W4243557525","https://openalex.org/W1489383734"],"abstract_inverted_index":{"Large":[0],"multimodal":[1],"datasets":[2],"such":[3],"as":[4],"The":[5],"Cancer":[6,41],"Genome":[7,42],"Atlas":[8,43],"present":[9,37],"an":[10,38],"opportunity":[11],"to":[12,21,58,72,118],"perform":[13],"correlative":[14],"studies":[15,96],"of":[16,40,53,65,75,91,97,103,115,127,150,158],"tissue":[17],"morphology":[18,47,77],"and":[19,30,60,78,94,107,146],"genomics":[20],"explore":[22],"the":[23,86,89,113,128,148,154],"morphological":[24,70,116,155],"phenotypes":[25],"associated":[26],"with":[27,48,124,143],"gene":[28,98],"expression":[29],"genetic":[31],"alterations.":[32],"In":[33],"this":[34],"paper":[35],"we":[36,67],"investigation":[39],"data":[44],"that":[45,136],"correlates":[46],"recently":[49],"discovered":[50],"molecular":[51,121],"subtypes":[52],"glioblastoma.":[54],"Using":[55],"image":[56],"analysis":[57,90,111,134],"segment":[59],"extract":[61],"features":[62],"from":[63],"millions":[64],"cells,":[66],"calculate":[68],"high-dimensional":[69],"signatures":[71,93,117],"describe":[73],"trends":[74],"nuclear":[76],"cytoplasmic":[79],"staining":[80],"in":[81,101,153],"whole-slide":[82],"images.":[83],"We":[84],"illustrate":[85],"similarities":[87],"between":[88],"these":[92],"predictive":[95],"expression,":[99],"both":[100],"terms":[102],"limited":[104],"sample":[105],"size":[106],"high-dimensionality.":[108],"Our":[109],"top-down":[110],"demonstrates":[112],"power":[114],"predict":[119],"clinically-relevant":[120],"tumor":[122,144],"subtypes,":[123],"85.4%":[125],"recognition":[126],"proneural":[129],"subtype.":[130],"A":[131],"complementary":[132],"bottom-up":[133],"shows":[135],"self-aggregating":[137],"clusters":[138],"have":[139],"statistically":[140],"significant":[141],"associations":[142],"subtype":[145],"reveals":[147],"existence":[149],"remarkable":[151],"structure":[152],"signature":[156],"space":[157],"glioblastomas.":[159]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":5},{"year":2012,"cited_by_count":3}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
