{"id":"https://openalex.org/W2157353440","doi":"https://doi.org/10.1109/isbi.2011.5872536","title":"Automated detection of white matter fiber bundles","display_name":"Automated detection of white matter fiber bundles","publication_year":2011,"publication_date":"2011-03-01","ids":{"openalex":"https://openalex.org/W2157353440","doi":"https://doi.org/10.1109/isbi.2011.5872536","mag":"2157353440"},"language":"en","primary_location":{"id":"doi:10.1109/isbi.2011.5872536","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi.2011.5872536","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 IEEE International Symposium on Biomedical Imaging: From Nano to Macro","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://inserm.hal.science/inserm-00607800","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5040225916","display_name":"Ralph O. Suarez","orcid":null},"institutions":[{"id":"https://openalex.org/I1288882113","display_name":"Boston Children's Hospital","ror":"https://ror.org/00dvg7y05","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1288882113"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Ralph O. Suarez","raw_affiliation_strings":["Harvard Medical School, Children''s Hospital, Boston, USA"],"affiliations":[{"raw_affiliation_string":"Harvard Medical School, Children''s Hospital, Boston, USA","institution_ids":["https://openalex.org/I1288882113","https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032667893","display_name":"Olivier Commowick","orcid":"https://orcid.org/0000-0001-7345-6752"},"institutions":[{"id":"https://openalex.org/I1288882113","display_name":"Boston Children's Hospital","ror":"https://ror.org/00dvg7y05","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1288882113"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Olivier Commowick","raw_affiliation_strings":["Harvard Medical School, Children''s Hospital, Boston, USA"],"affiliations":[{"raw_affiliation_string":"Harvard Medical School, Children''s Hospital, Boston, USA","institution_ids":["https://openalex.org/I1288882113","https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082113059","display_name":"Xavier Tomas-Fernandez","orcid":null},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I1288882113","display_name":"Boston Children's Hospital","ror":"https://ror.org/00dvg7y05","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1288882113"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xavier Tomas-Fernandez","raw_affiliation_strings":["Harvard Medical School, Children''s Hospital, Boston, USA"],"affiliations":[{"raw_affiliation_string":"Harvard Medical School, Children''s Hospital, Boston, USA","institution_ids":["https://openalex.org/I1288882113","https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032718030","display_name":"Sanjay P. Prabhu","orcid":"https://orcid.org/0000-0003-0871-115X"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I1288882113","display_name":"Boston Children's Hospital","ror":"https://ror.org/00dvg7y05","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1288882113"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sanjay Prabhu","raw_affiliation_strings":["Harvard Medical School, Children''s Hospital, Boston, USA"],"affiliations":[{"raw_affiliation_string":"Harvard Medical School, Children''s Hospital, Boston, USA","institution_ids":["https://openalex.org/I1288882113","https://openalex.org/I136199984"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5054913205","display_name":"Simon K. Warfield","orcid":"https://orcid.org/0000-0002-7659-3880"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I1288882113","display_name":"Boston Children's Hospital","ror":"https://ror.org/00dvg7y05","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1288882113"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Simon K. Warfield","raw_affiliation_strings":["Harvard Medical School, Children''s Hospital, Boston, USA"],"affiliations":[{"raw_affiliation_string":"Harvard Medical School, Children''s Hospital, Boston, USA","institution_ids":["https://openalex.org/I1288882113","https://openalex.org/I136199984"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5040225916"],"corresponding_institution_ids":["https://openalex.org/I1288882113","https://openalex.org/I136199984"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.21128257,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"845","last_page":"848"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11304","display_name":"Advanced Neuroimaging Techniques and Applications","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11304","display_name":"Advanced Neuroimaging Techniques and Applications","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12552","display_name":"Fetal and Pediatric Neurological Disorders","score":0.9861999750137329,"subfield":{"id":"https://openalex.org/subfields/2735","display_name":"Pediatrics, Perinatology and Child Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12303","display_name":"Tensor decomposition and applications","score":0.9803000092506409,"subfield":{"id":"https://openalex.org/subfields/2605","display_name":"Computational Mathematics"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/tractography","display_name":"Tractography","score":0.6930882334709167},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6846444606781006},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6704599857330322},{"id":"https://openalex.org/keywords/white-matter","display_name":"White matter","score":0.6275999546051025},{"id":"https://openalex.org/keywords/fiber-tract","display_name":"Fiber tract","score":0.5990655422210693},{"id":"https://openalex.org/keywords/diffusion-mri","display_name":"Diffusion MRI","score":0.5978567004203796},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.5436952710151672},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.4988250732421875},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4695492386817932},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.45951521396636963},{"id":"https://openalex.org/keywords/fiber","display_name":"Fiber","score":0.4257884919643402},{"id":"https://openalex.org/keywords/magnetic-resonance-imaging","display_name":"Magnetic resonance imaging","score":0.15363064408302307},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.1387883722782135},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.0902441143989563},{"id":"https://openalex.org/keywords/radiology","display_name":"Radiology","score":0.08613762259483337}],"concepts":[{"id":"https://openalex.org/C84787856","wikidata":"https://www.wikidata.org/wiki/Q3076659","display_name":"Tractography","level":4,"score":0.6930882334709167},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6846444606781006},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6704599857330322},{"id":"https://openalex.org/C2781192897","wikidata":"https://www.wikidata.org/wiki/Q822050","display_name":"White matter","level":3,"score":0.6275999546051025},{"id":"https://openalex.org/C2993925342","wikidata":"https://www.wikidata.org/wiki/Q28457374","display_name":"Fiber tract","level":4,"score":0.5990655422210693},{"id":"https://openalex.org/C149550507","wikidata":"https://www.wikidata.org/wiki/Q899360","display_name":"Diffusion MRI","level":3,"score":0.5978567004203796},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.5436952710151672},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.4988250732421875},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4695492386817932},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.45951521396636963},{"id":"https://openalex.org/C519885992","wikidata":"https://www.wikidata.org/wiki/Q161","display_name":"Fiber","level":2,"score":0.4257884919643402},{"id":"https://openalex.org/C143409427","wikidata":"https://www.wikidata.org/wiki/Q161238","display_name":"Magnetic resonance imaging","level":2,"score":0.15363064408302307},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.1387883722782135},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0902441143989563},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.08613762259483337},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/isbi.2011.5872536","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi.2011.5872536","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2011 IEEE International Symposium on Biomedical Imaging: From Nano to Macro","raw_type":"proceedings-article"},{"id":"pmh:oai:HAL:inserm-00607800v1","is_oa":true,"landing_page_url":"https://inserm.hal.science/inserm-00607800","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011, Apr 2011, Chicago, IL, United States. pp.845-848, &#x27E8;10.1109/ISBI.2011.5872536&#x27E9;","raw_type":"Conference papers"}],"best_oa_location":{"id":"pmh:oai:HAL:inserm-00607800v1","is_oa":true,"landing_page_url":"https://inserm.hal.science/inserm-00607800","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011, Apr 2011, Chicago, IL, United States. pp.845-848, &#x27E8;10.1109/ISBI.2011.5872536&#x27E9;","raw_type":"Conference papers"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W1963521532","https://openalex.org/W2000262961","https://openalex.org/W2009837079","https://openalex.org/W2014509822","https://openalex.org/W2045498423","https://openalex.org/W2048192550","https://openalex.org/W2063172257","https://openalex.org/W2074888367","https://openalex.org/W2082356686","https://openalex.org/W2106763716","https://openalex.org/W2123326080","https://openalex.org/W2148347694","https://openalex.org/W2165118835","https://openalex.org/W2170596158","https://openalex.org/W2296621543","https://openalex.org/W4232051212"],"related_works":["https://openalex.org/W2142608172","https://openalex.org/W2032211030","https://openalex.org/W2376425756","https://openalex.org/W2202927948","https://openalex.org/W3035690190","https://openalex.org/W2389394220","https://openalex.org/W2391001991","https://openalex.org/W3102888858","https://openalex.org/W2091464493","https://openalex.org/W1768525409"],"abstract_inverted_index":{"White":[0],"matter":[1],"(WM)":[2],"fiber":[3,44,75],"bundles":[4],"of":[5,33,40,66,71,100],"the":[6,38,41,69,101,117],"brain":[7],"can":[8,20],"be":[9],"delineated":[10],"by":[11],"diffusion":[12],"tractography":[13],"utilizing":[14],"anatomical":[15,35],"regions-of-interest":[16],"(ROI).":[17],"These":[18],"ROIs":[19,36,67],"specify":[21],"seed":[22],"regions":[23],"in":[24,77],"which":[25],"tract":[26],"generation":[27],"algorithms":[28],"are":[29],"initiated.":[30],"Interactive":[31],"identification":[32],"such":[34],"enables":[37],"detection":[39,70],"major":[42,73],"WM":[43,74],"tracts,":[45],"but":[46],"suffers":[47],"from":[48,92],"inter-rater":[49],"and":[50,53,59],"intra-rater":[51],"variability,":[52],"is":[54],"time":[55],"consuming.":[56],"We":[57],"developed":[58],"compared":[60,85],"three":[61],"techniques":[62],"for":[63,68],"automated":[64],"delineation":[65],"two":[72],"tracts":[76,90,113],"12":[78],"healthy":[79],"subjects.":[80],"Tracts":[81],"identified":[82],"automatically":[83],"were":[84],"quantitatively":[86],"to":[87,111],"reference":[88,118],"standard":[89],"derived":[91],"carefully":[93],"hand-drawn":[94],"ROIs.":[95],"Based":[96],"on":[97],"comparative":[98],"performance":[99],"experimental":[102],"techniques,":[103],"a":[104],"multi-template":[105],"label":[106],"fusion":[107],"algorithm":[108],"was":[109],"found":[110],"generate":[112],"most":[114],"consistent":[115],"with":[116],"standard.":[119]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
