{"id":"https://openalex.org/W2115628238","doi":"https://doi.org/10.1109/isbi.2008.4541211","title":"Application and validation of registration framework for real-time atlas guided biopsy","display_name":"Application and validation of registration framework for real-time atlas guided biopsy","publication_year":2008,"publication_date":"2008-05-01","ids":{"openalex":"https://openalex.org/W2115628238","doi":"https://doi.org/10.1109/isbi.2008.4541211","mag":"2115628238"},"language":"en","primary_location":{"id":"doi:10.1109/isbi.2008.4541211","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi.2008.4541211","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5111864331","display_name":"R. Narayanan","orcid":null},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"R. Narayanan","raw_affiliation_strings":["Grass Valley Ave, Eigen Limited Liability Company, Grass Valley, CA, USA","Eigen LLC, Grass Valley, CA"],"affiliations":[{"raw_affiliation_string":"Grass Valley Ave, Eigen Limited Liability Company, Grass Valley, CA, USA","institution_ids":[]},{"raw_affiliation_string":"Eigen LLC, Grass Valley, CA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000937401","display_name":"Dinggang Shen","orcid":"https://orcid.org/0000-0002-7934-5698"},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]},{"id":"https://openalex.org/I36788626","display_name":"California University of Pennsylvania","ror":"https://ror.org/01spssf70","country_code":"US","type":"education","lineage":["https://openalex.org/I36788626"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"D. Shen","raw_affiliation_strings":["Section of Biomedical Image Analysis, Department of Radiology, University of Pennsylvania, PA, USA","#N#               * University of Pennsylvania"],"affiliations":[{"raw_affiliation_string":"Section of Biomedical Image Analysis, Department of Radiology, University of Pennsylvania, PA, USA","institution_ids":["https://openalex.org/I79576946"]},{"raw_affiliation_string":"#N#               * University of Pennsylvania","institution_ids":["https://openalex.org/I36788626","https://openalex.org/I79576946"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034999945","display_name":"Christos Davatzikos","orcid":"https://orcid.org/0000-0002-1025-8561"},"institutions":[{"id":"https://openalex.org/I36788626","display_name":"California University of Pennsylvania","ror":"https://ror.org/01spssf70","country_code":"US","type":"education","lineage":["https://openalex.org/I36788626"]},{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"C. Davatzikos","raw_affiliation_strings":["Section of Biomedical Image Analysis, Department of Radiology, University of Pennsylvania, PA, USA","#N#               * University of Pennsylvania"],"affiliations":[{"raw_affiliation_string":"Section of Biomedical Image Analysis, Department of Radiology, University of Pennsylvania, PA, USA","institution_ids":["https://openalex.org/I79576946"]},{"raw_affiliation_string":"#N#               * University of Pennsylvania","institution_ids":["https://openalex.org/I36788626","https://openalex.org/I79576946"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109294755","display_name":"D. Crawford","orcid":null},"institutions":[{"id":"https://openalex.org/I4210087413","display_name":"University of Colorado Health","ror":"https://ror.org/0107w4315","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210087413"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"D. E. Crawford","raw_affiliation_strings":["University of Colorado, Health Sciences Center, CO, USA","University of Colorado at Health Sciences Center, U.S.A"],"affiliations":[{"raw_affiliation_string":"University of Colorado, Health Sciences Center, CO, USA","institution_ids":["https://openalex.org/I4210087413"]},{"raw_affiliation_string":"University of Colorado at Health Sciences Center, U.S.A","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086759404","display_name":"Al B. Barqawi","orcid":"https://orcid.org/0000-0002-7811-0328"},"institutions":[{"id":"https://openalex.org/I4210087413","display_name":"University of Colorado Health","ror":"https://ror.org/0107w4315","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210087413"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"A. Barqawi","raw_affiliation_strings":["University of Colorado, Health Sciences Center, CO, USA","University of Colorado at Health Sciences Center, U.S.A"],"affiliations":[{"raw_affiliation_string":"University of Colorado, Health Sciences Center, CO, USA","institution_ids":["https://openalex.org/I4210087413"]},{"raw_affiliation_string":"University of Colorado at Health Sciences Center, U.S.A","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066964391","display_name":"Priya N. Werahera","orcid":null},"institutions":[{"id":"https://openalex.org/I4210087413","display_name":"University of Colorado Health","ror":"https://ror.org/0107w4315","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210087413"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"P. N. Werahera","raw_affiliation_strings":["University of Colorado, Health Sciences Center, CO, USA","University of Colorado at Health Sciences Center, U.S.A"],"affiliations":[{"raw_affiliation_string":"University of Colorado, Health Sciences Center, CO, USA","institution_ids":["https://openalex.org/I4210087413"]},{"raw_affiliation_string":"University of Colorado at Health Sciences Center, U.S.A","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100328491","display_name":"Dinesh Kumar","orcid":"https://orcid.org/0000-0003-3602-4023"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"D. Kumar","raw_affiliation_strings":["Grass Valley Ave, Eigen Limited Liability Company, Grass Valley, CA, USA","Eigen LLC"],"affiliations":[{"raw_affiliation_string":"Grass Valley Ave, Eigen Limited Liability Company, Grass Valley, CA, USA","institution_ids":[]},{"raw_affiliation_string":"Eigen LLC","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5071959897","display_name":"Jasjit S. Suri","orcid":"https://orcid.org/0000-0001-6499-396X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"J. S. Suri","raw_affiliation_strings":["Grass Valley Ave, Eigen Limited Liability Company, Grass Valley, CA, USA","Eigen LLC"],"affiliations":[{"raw_affiliation_string":"Grass Valley Ave, Eigen Limited Liability Company, Grass Valley, CA, USA","institution_ids":[]},{"raw_affiliation_string":"Eigen LLC","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5111864331"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.19224078,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1175","last_page":"1178"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10124","display_name":"Prostate Cancer Diagnosis and Treatment","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10124","display_name":"Prostate Cancer Diagnosis and Treatment","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9908000230789185,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10036","display_name":"Advanced Neural Network Applications","score":0.9883999824523926,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/atlas","display_name":"Atlas (anatomy)","score":0.8494076728820801},{"id":"https://openalex.org/keywords/cancer-detection","display_name":"Cancer detection","score":0.7484758496284485},{"id":"https://openalex.org/keywords/image-registration","display_name":"Image registration","score":0.6535794138908386},{"id":"https://openalex.org/keywords/prostate-cancer","display_name":"Prostate cancer","score":0.5887665152549744},{"id":"https://openalex.org/keywords/biopsy","display_name":"Biopsy","score":0.5633838176727295},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.46073266863822937},{"id":"https://openalex.org/keywords/core-biopsy","display_name":"Core biopsy","score":0.4449065029621124},{"id":"https://openalex.org/keywords/radiology","display_name":"Radiology","score":0.4384843707084656},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.35853224992752075},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.35586562752723694},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.34553754329681396},{"id":"https://openalex.org/keywords/breast-cancer","display_name":"Breast cancer","score":0.15781289339065552},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.07588234543800354},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.0709199607372284}],"concepts":[{"id":"https://openalex.org/C2776673561","wikidata":"https://www.wikidata.org/wiki/Q655357","display_name":"Atlas (anatomy)","level":2,"score":0.8494076728820801},{"id":"https://openalex.org/C2985322473","wikidata":"https://www.wikidata.org/wiki/Q3044843","display_name":"Cancer detection","level":3,"score":0.7484758496284485},{"id":"https://openalex.org/C166704113","wikidata":"https://www.wikidata.org/wiki/Q861092","display_name":"Image registration","level":3,"score":0.6535794138908386},{"id":"https://openalex.org/C2780192828","wikidata":"https://www.wikidata.org/wiki/Q181257","display_name":"Prostate cancer","level":3,"score":0.5887665152549744},{"id":"https://openalex.org/C2775934546","wikidata":"https://www.wikidata.org/wiki/Q179991","display_name":"Biopsy","level":2,"score":0.5633838176727295},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.46073266863822937},{"id":"https://openalex.org/C3019914693","wikidata":"https://www.wikidata.org/wiki/Q179991","display_name":"Core biopsy","level":4,"score":0.4449065029621124},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.4384843707084656},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.35853224992752075},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.35586562752723694},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.34553754329681396},{"id":"https://openalex.org/C530470458","wikidata":"https://www.wikidata.org/wiki/Q128581","display_name":"Breast cancer","level":3,"score":0.15781289339065552},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.07588234543800354},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0709199607372284},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/isbi.2008.4541211","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi.2008.4541211","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.6899999976158142}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":10,"referenced_works":["https://openalex.org/W1965734230","https://openalex.org/W2016302913","https://openalex.org/W2036797747","https://openalex.org/W2038952578","https://openalex.org/W2064485308","https://openalex.org/W2101054201","https://openalex.org/W2117118594","https://openalex.org/W2148946811","https://openalex.org/W2167014760","https://openalex.org/W2323555604"],"related_works":["https://openalex.org/W2314146950","https://openalex.org/W2011187995","https://openalex.org/W2373521488","https://openalex.org/W2324878645","https://openalex.org/W2803101231","https://openalex.org/W4284509","https://openalex.org/W4393084406","https://openalex.org/W606911313","https://openalex.org/W4229506690","https://openalex.org/W1990901612"],"abstract_inverted_index":{"It":[0,124],"is":[1,7],"widely":[2],"established":[3],"that":[4],"prostate":[5,26],"cancer":[6,27,37,74,91],"a":[8,49,54,67],"multifocal":[9],"disease":[10],"and":[11,31,104,113,118],"cancerous":[12],"lesions":[13],"are":[14],"not":[15],"uniformly":[16],"distributed":[17],"within":[18],"the":[19,43,60,83,87,105,131],"gland.":[20],"Current":[21],"imaging":[22],"methods":[23],"cannot":[24],"detect":[25],"with":[28,48,101],"sufficient":[29],"sensitivity":[30],"specificity,":[32],"especially":[33],"localized":[34],"cancers.":[35],"A":[36],"atlas":[38,44,65,84],"was":[39,96,108],"previously":[40],"demonstrated.":[41],"However":[42],"must":[45],"be":[46,111],"registered":[47],"patient's":[50],"ultrasound":[51],"image":[52],"in":[53,66,76],"clinical":[55,68],"procedure.":[56,134],"Here":[57],"we":[58],"present":[59],"fast":[61],"registration":[62,95,133],"of":[63],"this":[64],"setting":[69],"so":[70],"as":[71],"to":[72,78,86,89,110],"map":[73],"likelihoods":[75],"addition":[77],"optimized":[79,116],"biopsy":[80,121],"locations":[81],"from":[82],"space":[85],"subject":[88],"maximize":[90],"detection":[92,106],"accuracy.":[93],"The":[94],"validated":[97],"on":[98],"158":[99],"subjects":[100],"cancers":[102],"annotated":[103],"rate":[107],"found":[109],"84.81%":[112],"89.87%":[114],"for":[115,130],"7":[117],"12":[119],"core":[120],"schemes":[122],"respectively.":[123],"took":[125],"less":[126],"than":[127],"8":[128],"seconds":[129],"entire":[132]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
