{"id":"https://openalex.org/W2154182375","doi":"https://doi.org/10.1109/isbi.2006.1624862","title":"A Fast, Robust and Scale-Independent Approach to Estimate Vessel Diameters in Intravital Fluorescence Microscopy Images","display_name":"A Fast, Robust and Scale-Independent Approach to Estimate Vessel Diameters in Intravital Fluorescence Microscopy Images","publication_year":2006,"publication_date":"2006-05-25","ids":{"openalex":"https://openalex.org/W2154182375","doi":"https://doi.org/10.1109/isbi.2006.1624862","mag":"2154182375"},"language":"en","primary_location":{"id":"doi:10.1109/isbi.2006.1624862","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi.2006.1624862","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"3rd IEEE International Symposium on Biomedical Imaging: Macro to Nano, 2006.","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5061489565","display_name":"O. McEnery","orcid":null},"institutions":[{"id":"https://openalex.org/I138801177","display_name":"University of Ulster","ror":"https://ror.org/01yp9g959","country_code":"GB","type":"education","lineage":["https://openalex.org/I138801177"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"O. McEnery","raw_affiliation_strings":["University of Ulster, Coleraine, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Ulster, Coleraine, UK","institution_ids":["https://openalex.org/I138801177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080624516","display_name":"L. Lucas","orcid":"https://orcid.org/0000-0001-7981-5832"},"institutions":[{"id":"https://openalex.org/I138801177","display_name":"University of Ulster","ror":"https://ror.org/01yp9g959","country_code":"GB","type":"education","lineage":["https://openalex.org/I138801177"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"L. Lucas","raw_affiliation_strings":["University of Ulster, Coleraine, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Ulster, Coleraine, UK","institution_ids":["https://openalex.org/I138801177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015728413","display_name":"YingLiang Ma","orcid":"https://orcid.org/0000-0001-5770-5843"},"institutions":[{"id":"https://openalex.org/I138801177","display_name":"University of Ulster","ror":"https://ror.org/01yp9g959","country_code":"GB","type":"education","lineage":["https://openalex.org/I138801177"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"YingLiang Ma","raw_affiliation_strings":["University of Ulster, Coleraine, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Ulster, Coleraine, UK","institution_ids":["https://openalex.org/I138801177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064073991","display_name":"Philip Morrow","orcid":"https://orcid.org/0000-0002-2373-4758"},"institutions":[{"id":"https://openalex.org/I138801177","display_name":"University of Ulster","ror":"https://ror.org/01yp9g959","country_code":"GB","type":"education","lineage":["https://openalex.org/I138801177"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"P. Morrow","raw_affiliation_strings":["University of Ulster, Coleraine, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Ulster, Coleraine, UK","institution_ids":["https://openalex.org/I138801177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050769695","display_name":"Christopher A. Mitchell","orcid":"https://orcid.org/0000-0002-4422-7499"},"institutions":[{"id":"https://openalex.org/I138801177","display_name":"University of Ulster","ror":"https://ror.org/01yp9g959","country_code":"GB","type":"education","lineage":["https://openalex.org/I138801177"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"C. Mitchell","raw_affiliation_strings":["University of Ulster, Coleraine, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Ulster, Coleraine, UK","institution_ids":["https://openalex.org/I138801177"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5021257342","display_name":"Kurt Saetzler","orcid":null},"institutions":[{"id":"https://openalex.org/I138801177","display_name":"University of Ulster","ror":"https://ror.org/01yp9g959","country_code":"GB","type":"education","lineage":["https://openalex.org/I138801177"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"K. Saetzler","raw_affiliation_strings":["University of Ulster, Coleraine, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Ulster, Coleraine, UK","institution_ids":["https://openalex.org/I138801177"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I138801177"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.1362722,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"4","issue":null,"first_page":"101","last_page":"104"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10422","display_name":"Angiogenesis and VEGF in Cancer","score":0.991599977016449,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10422","display_name":"Angiogenesis and VEGF in Cancer","score":0.991599977016449,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10977","display_name":"Optical Imaging and Spectroscopy Techniques","score":0.9858999848365784,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11569","display_name":"Optical Coherence Tomography Applications","score":0.9858999848365784,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/intravital-microscopy","display_name":"Intravital microscopy","score":0.7428334355354309},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.6593976616859436},{"id":"https://openalex.org/keywords/fluorescence-microscope","display_name":"Fluorescence microscope","score":0.6365371346473694},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5653148889541626},{"id":"https://openalex.org/keywords/microscopy","display_name":"Microscopy","score":0.5320027470588684},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.5208404660224915},{"id":"https://openalex.org/keywords/noise","display_name":"Noise (video)","score":0.49713972210884094},{"id":"https://openalex.org/keywords/network-topology","display_name":"Network topology","score":0.48165595531463623},{"id":"https://openalex.org/keywords/fluorescence-lifetime-imaging-microscopy","display_name":"Fluorescence-lifetime imaging microscopy","score":0.45894280076026917},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.45456698536872864},{"id":"https://openalex.org/keywords/image-resolution","display_name":"Image resolution","score":0.44205474853515625},{"id":"https://openalex.org/keywords/signal-to-noise-ratio","display_name":"Signal-to-noise ratio (imaging)","score":0.4246107339859009},{"id":"https://openalex.org/keywords/topology","display_name":"Topology (electrical circuits)","score":0.4140341877937317},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.38652801513671875},{"id":"https://openalex.org/keywords/biomedical-engineering","display_name":"Biomedical engineering","score":0.3640371561050415},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.35812681913375854},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.35028746724128723},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.34616219997406006},{"id":"https://openalex.org/keywords/fluorescence","display_name":"Fluorescence","score":0.34368282556533813},{"id":"https://openalex.org/keywords/optics","display_name":"Optics","score":0.2968367636203766},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.25271111726760864},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.19851598143577576},{"id":"https://openalex.org/keywords/in-vivo","display_name":"In vivo","score":0.16537553071975708},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.1084263026714325},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08467653393745422}],"concepts":[{"id":"https://openalex.org/C2859252","wikidata":"https://www.wikidata.org/wiki/Q1543928","display_name":"Intravital microscopy","level":3,"score":0.7428334355354309},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.6593976616859436},{"id":"https://openalex.org/C169274487","wikidata":"https://www.wikidata.org/wiki/Q840211","display_name":"Fluorescence microscope","level":3,"score":0.6365371346473694},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5653148889541626},{"id":"https://openalex.org/C147080431","wikidata":"https://www.wikidata.org/wiki/Q1074953","display_name":"Microscopy","level":2,"score":0.5320027470588684},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.5208404660224915},{"id":"https://openalex.org/C99498987","wikidata":"https://www.wikidata.org/wiki/Q2210247","display_name":"Noise (video)","level":3,"score":0.49713972210884094},{"id":"https://openalex.org/C199845137","wikidata":"https://www.wikidata.org/wiki/Q145490","display_name":"Network topology","level":2,"score":0.48165595531463623},{"id":"https://openalex.org/C57477423","wikidata":"https://www.wikidata.org/wiki/Q1434196","display_name":"Fluorescence-lifetime imaging microscopy","level":3,"score":0.45894280076026917},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.45456698536872864},{"id":"https://openalex.org/C205372480","wikidata":"https://www.wikidata.org/wiki/Q210521","display_name":"Image resolution","level":2,"score":0.44205474853515625},{"id":"https://openalex.org/C13944312","wikidata":"https://www.wikidata.org/wiki/Q7512748","display_name":"Signal-to-noise ratio (imaging)","level":2,"score":0.4246107339859009},{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.4140341877937317},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.38652801513671875},{"id":"https://openalex.org/C136229726","wikidata":"https://www.wikidata.org/wiki/Q327092","display_name":"Biomedical engineering","level":1,"score":0.3640371561050415},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.35812681913375854},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.35028746724128723},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.34616219997406006},{"id":"https://openalex.org/C91881484","wikidata":"https://www.wikidata.org/wiki/Q191807","display_name":"Fluorescence","level":2,"score":0.34368282556533813},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.2968367636203766},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.25271111726760864},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.19851598143577576},{"id":"https://openalex.org/C207001950","wikidata":"https://www.wikidata.org/wiki/Q141124","display_name":"In vivo","level":2,"score":0.16537553071975708},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.1084263026714325},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08467653393745422},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C150903083","wikidata":"https://www.wikidata.org/wiki/Q7108","display_name":"Biotechnology","level":1,"score":0.0},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/isbi.2006.1624862","is_oa":false,"landing_page_url":"https://doi.org/10.1109/isbi.2006.1624862","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"3rd IEEE International Symposium on Biomedical Imaging: Macro to Nano, 2006.","raw_type":"proceedings-article"},{"id":"pmh:oai:ueaeprints.uea.ac.uk:90398","is_oa":false,"landing_page_url":"https://ueaeprints.uea.ac.uk/id/eprint/90398/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400384","display_name":"UEA Digital Repository (University of East Anglia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1118541","host_organization_name":"University of East Anglia","host_organization_lineage":["https://openalex.org/I1118541"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Book Section"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320334627","display_name":"Engineering and Physical Sciences Research Council","ror":"https://ror.org/0439y7842"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":8,"referenced_works":["https://openalex.org/W1979887297","https://openalex.org/W2066374954","https://openalex.org/W2129830232","https://openalex.org/W2130350966","https://openalex.org/W2152063743","https://openalex.org/W2168932490","https://openalex.org/W2760896545","https://openalex.org/W6744717357"],"related_works":["https://openalex.org/W2419325774","https://openalex.org/W2066374954","https://openalex.org/W4385333704","https://openalex.org/W2031505386","https://openalex.org/W1488679181","https://openalex.org/W2006002803","https://openalex.org/W2059672839","https://openalex.org/W3184844207","https://openalex.org/W1966978880","https://openalex.org/W3134642825"],"abstract_inverted_index":{"Analyzing":[0],"dynamic":[1],"biological":[2],"systems,":[3],"such":[4,60,91],"as":[5],"blood":[6],"vessel":[7,75,109],"growth":[8],"in":[9,39,85],"healing":[10],"wounds":[11],"or":[12,47],"tumour":[13],"development,":[14],"requires":[15,31],"high":[16],"spatial":[17],"and":[18,58,69,100,103],"temporal":[19],"resolution.":[20],"Intravital":[21],"fluorescence":[22],"microscopy":[23],"allows":[24],"for":[25,90,114],"longitudinal":[26],"subcellular":[27],"imaging,":[28],"but":[29],"it":[30],"the":[32,44,48,51,74],"use":[33],"of":[34,50,81],"advanced":[35],"image":[36],"analysis":[37],"tools":[38],"order":[40],"to":[41,55],"quantitatively":[42],"extract":[43],"relevant":[45],"parameters":[46],"topology":[49],"underlying":[52],"network":[53,110],"structure":[54],"subsequently":[56],"model":[57],"simulate":[59],"a":[61,67,78,96],"system":[62],"mathematically.":[63],"We":[64],"will":[65],"present":[66],"fast":[68],"robust":[70],"approach":[71],"that":[72,87],"estimates":[73],"diameter":[76],"with":[77,95],"low":[79,97],"coefficient":[80],"error":[82],"<":[83],"6%":[84],"settings":[86],"are":[88],"typical":[89],"in-vivo":[92],"imaging":[93],"scenarios":[94],"signal-to-noise":[98],"ratio":[99],"often":[101],"sub-optimal":[102],"uneven":[104],"background":[105],"illumination.":[106],"The":[107],"generated":[108],"is":[111],"geometrically":[112],"cleansed":[113],"an":[115],"optimal":[116],"topological":[117],"representation.":[118]},"counts_by_year":[],"updated_date":"2026-07-02T09:51:11.867554","created_date":"2025-10-10T00:00:00"}
