{"id":"https://openalex.org/W4403278289","doi":"https://doi.org/10.1109/is61756.2024.10705245","title":"Machine Learning Approach into Bacterial Relationship: Exploring 16S rRNA Metabarcoding with Association Rule Mining","display_name":"Machine Learning Approach into Bacterial Relationship: Exploring 16S rRNA Metabarcoding with Association Rule Mining","publication_year":2024,"publication_date":"2024-08-29","ids":{"openalex":"https://openalex.org/W4403278289","doi":"https://doi.org/10.1109/is61756.2024.10705245"},"language":"en","primary_location":{"id":"doi:10.1109/is61756.2024.10705245","is_oa":false,"landing_page_url":"https://doi.org/10.1109/is61756.2024.10705245","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 IEEE 12th International Conference on Intelligent Systems (IS)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5093057063","display_name":"Omer Faruk Sari","orcid":"https://orcid.org/0009-0007-5777-9763"},"institutions":[{"id":"https://openalex.org/I63072094","display_name":"University of Portsmouth","ror":"https://ror.org/03ykbk197","country_code":"GB","type":"education","lineage":["https://openalex.org/I63072094"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Omer Faruk Sari","raw_affiliation_strings":["School of Computing, University of Portsmouth,Portsmouth,United Kingdom"],"affiliations":[{"raw_affiliation_string":"School of Computing, University of Portsmouth,Portsmouth,United Kingdom","institution_ids":["https://openalex.org/I63072094"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004388109","display_name":"Mohamed Bader\u2013El\u2013Den","orcid":"https://orcid.org/0000-0002-1123-6823"},"institutions":[{"id":"https://openalex.org/I63072094","display_name":"University of Portsmouth","ror":"https://ror.org/03ykbk197","country_code":"GB","type":"education","lineage":["https://openalex.org/I63072094"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Mohamed Bader-El-Den","raw_affiliation_strings":["School of Computing, University of Portsmouth,Portsmouth,United Kingdom"],"affiliations":[{"raw_affiliation_string":"School of Computing, University of Portsmouth,Portsmouth,United Kingdom","institution_ids":["https://openalex.org/I63072094"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108184125","display_name":"Volkan Ince","orcid":null},"institutions":[{"id":"https://openalex.org/I63072094","display_name":"University of Portsmouth","ror":"https://ror.org/03ykbk197","country_code":"GB","type":"education","lineage":["https://openalex.org/I63072094"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Volkan Ince","raw_affiliation_strings":["School of Computing, University of Portsmouth,Portsmouth,United Kingdom"],"affiliations":[{"raw_affiliation_string":"School of Computing, University of Portsmouth,Portsmouth,United Kingdom","institution_ids":["https://openalex.org/I63072094"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060060808","display_name":"Farzad Arabikhan","orcid":"https://orcid.org/0000-0002-4336-2007"},"institutions":[{"id":"https://openalex.org/I63072094","display_name":"University of Portsmouth","ror":"https://ror.org/03ykbk197","country_code":"GB","type":"education","lineage":["https://openalex.org/I63072094"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Farzad Arabikhan","raw_affiliation_strings":["School of Computing, University of Portsmouth,Portsmouth,United Kingdom"],"affiliations":[{"raw_affiliation_string":"School of Computing, University of Portsmouth,Portsmouth,United Kingdom","institution_ids":["https://openalex.org/I63072094"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5093057063"],"corresponding_institution_ids":["https://openalex.org/I63072094"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.16056838,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"6"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.9934999942779541,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.9934999942779541,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.980400025844574,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12640","display_name":"Environmental DNA in Biodiversity Studies","score":0.9498999714851379,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/association-rule-learning","display_name":"Association rule learning","score":0.8194813132286072},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4962318539619446},{"id":"https://openalex.org/keywords/association","display_name":"Association (psychology)","score":0.48170381784439087},{"id":"https://openalex.org/keywords/16s-ribosomal-rna","display_name":"16S ribosomal RNA","score":0.4574304521083832},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4392695128917694},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4117127060890198},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3273589313030243},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2799505591392517},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.18714401125907898},{"id":"https://openalex.org/keywords/bacteria","display_name":"Bacteria","score":0.18134725093841553},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.1415826380252838}],"concepts":[{"id":"https://openalex.org/C193524817","wikidata":"https://www.wikidata.org/wiki/Q386780","display_name":"Association rule learning","level":2,"score":0.8194813132286072},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4962318539619446},{"id":"https://openalex.org/C142853389","wikidata":"https://www.wikidata.org/wiki/Q744778","display_name":"Association (psychology)","level":2,"score":0.48170381784439087},{"id":"https://openalex.org/C42062724","wikidata":"https://www.wikidata.org/wiki/Q1209205","display_name":"16S ribosomal RNA","level":3,"score":0.4574304521083832},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4392695128917694},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4117127060890198},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3273589313030243},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2799505591392517},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.18714401125907898},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.18134725093841553},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.1415826380252838},{"id":"https://openalex.org/C542102704","wikidata":"https://www.wikidata.org/wiki/Q183257","display_name":"Psychotherapist","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/is61756.2024.10705245","is_oa":false,"landing_page_url":"https://doi.org/10.1109/is61756.2024.10705245","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 IEEE 12th International Conference on Intelligent Systems (IS)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":10,"referenced_works":["https://openalex.org/W2013633172","https://openalex.org/W2138222057","https://openalex.org/W2757552662","https://openalex.org/W2896805537","https://openalex.org/W3091644754","https://openalex.org/W3092112152","https://openalex.org/W3118670782","https://openalex.org/W3163642729","https://openalex.org/W4386295563","https://openalex.org/W6601142415"],"related_works":["https://openalex.org/W2392697706","https://openalex.org/W366033468","https://openalex.org/W128746893","https://openalex.org/W2367573304","https://openalex.org/W2537030075","https://openalex.org/W2006971496","https://openalex.org/W2065998343","https://openalex.org/W2369717039","https://openalex.org/W2384676159","https://openalex.org/W2982449560"],"abstract_inverted_index":{"Metabarcoding":[0],"is":[1,77,160],"a":[2,15,45,67,109,120,135,157,186],"technique":[3],"for":[4],"analysing":[5],"DNA":[6],"sequences":[7],"that":[8,141,190],"target":[9],"specific":[10],"gene":[11],"regions":[12],"and":[13,21,37,96,117,164,211],"plays":[14],"crucial":[16],"role":[17],"in":[18,40,89,170,175,209,221],"the":[19,32,58,72,78,99,102,113,127,142,148,154,176,179,191,197,213],"identification":[20],"classification":[22],"of":[23,34,52,61,74,80,115,122,130,138,144,150,173,183,193,199,215],"different":[24],"organisms.":[25],"In":[26],"particular,":[27],"16S":[28,53],"rRNA":[29,54],"metabarcoding":[30,50],"enables":[31],"elucidation":[33],"complex":[35,223],"bacterial":[36],"archaeal":[38],"communities":[39],"food.":[41],"This":[42,124],"research":[43],"presents":[44],"novel":[46],"dataset":[47],"obtained":[48],"by":[49],"analysis":[51,107],"aimed":[55],"at":[56,153],"elucidating":[57],"microbial":[59,132,207],"dynamics":[60,208],"cooked,":[62],"ready-to-eat":[63],"ham":[64],"products":[65],"over":[66],"defined":[68],"storage":[69],"period.":[70],"At":[71,101],"centre":[73],"our":[75,106],"investigation":[76],"application":[79],"association":[81],"rule":[82],"mining,":[83,91],"an":[84],"unsupervised":[85],"machine":[86],"learning":[87],"approach":[88],"data":[90,218],"to":[92],"uncover":[93],"latent":[94],"patterns":[95],"relationships":[97],"within":[98],"dataset.":[100,177],"taxonomic":[103],"\u201cfamily\u201d":[104],"level,":[105,156],"shows":[108],"strong":[110,187],"correlation":[111],"between":[112,162],"presence":[114,143,149,192,198],"Bacillaceae":[116,145],"Staphylococcaceae":[118],"with":[119,134,166],"support":[121],"92%.":[123],"finding":[125],"highlights":[126],"consistent":[128],"co-occurrence":[129],"these":[131],"families":[133],"confidence":[136,181],"level":[137,182],"96%,":[139],"meaning":[140],"strongly":[146],"predicts":[147,196],"Staphylococcaceae.":[151],"Furthermore,":[152],"genus":[155],"significant":[158],"relationship":[159],"observed":[161],"Brochotrix":[163,194],"Arthrobacter,":[165],"both":[167],"genera":[168],"co-occurring":[169],"approximately":[171],"85%":[172],"samples":[174],"Notably,":[178],"high":[180],"98%":[184],"suggests":[185],"association,":[188],"suggesting":[189],"reliably":[195],"Arthrobacter.":[200],"These":[201],"results":[202],"provide":[203],"valuable":[204],"insights":[205],"into":[206],"food":[210,224],"demonstrate":[212],"effectiveness":[214],"using":[216],"advanced":[217],"mining":[219],"techniques":[220],"deciphering":[222],"ecosystems":[225],"interactions.":[226]},"counts_by_year":[],"updated_date":"2025-12-27T23:08:20.325037","created_date":"2025-10-10T00:00:00"}