{"id":"https://openalex.org/W2065466403","doi":"https://doi.org/10.1109/ipta.2012.6469525","title":"Search of protein structural blocks through secondary structure triplets","display_name":"Search of protein structural blocks through secondary structure triplets","publication_year":2012,"publication_date":"2012-10-01","ids":{"openalex":"https://openalex.org/W2065466403","doi":"https://doi.org/10.1109/ipta.2012.6469525","mag":"2065466403"},"language":"en","primary_location":{"id":"doi:10.1109/ipta.2012.6469525","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ipta.2012.6469525","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 3rd International Conference on Image Processing Theory, Tools and Applications (IPTA)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043172131","display_name":"Virginio Cantoni","orcid":"https://orcid.org/0000-0002-8636-562X"},"institutions":[{"id":"https://openalex.org/I25217355","display_name":"University of Pavia","ror":"https://ror.org/00s6t1f81","country_code":"IT","type":"education","lineage":["https://openalex.org/I25217355"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"V. Cantoni","raw_affiliation_strings":["Department of Electrical and Computer Engineering, University of Pavia, Pavia, Italy","University of Pavia, Department of Electrical and Computer Engineering, Via A. Ferrata, 1, 27100, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, University of Pavia, Pavia, Italy","institution_ids":["https://openalex.org/I25217355"]},{"raw_affiliation_string":"University of Pavia, Department of Electrical and Computer Engineering, Via A. Ferrata, 1, 27100, Italy","institution_ids":["https://openalex.org/I25217355"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056058478","display_name":"Alessio Ferone","orcid":"https://orcid.org/0000-0002-4883-0164"},"institutions":[{"id":"https://openalex.org/I183638586","display_name":"Parthenope University of Naples","ror":"https://ror.org/05pcv4v03","country_code":"IT","type":"education","lineage":["https://openalex.org/I183638586"]},{"id":"https://openalex.org/I71267560","display_name":"University of Naples Federico II","ror":"https://ror.org/05290cv24","country_code":"IT","type":"education","lineage":["https://openalex.org/I71267560"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"A. Ferone","raw_affiliation_strings":["Department of Applied Science, University of Naples Parthenope, Napoli, Italy","University of Naples Parthenope, Department of Applied Science, Centro Direzionale Isola C4, 80133, Napoli, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Applied Science, University of Naples Parthenope, Napoli, Italy","institution_ids":["https://openalex.org/I183638586"]},{"raw_affiliation_string":"University of Naples Parthenope, Department of Applied Science, Centro Direzionale Isola C4, 80133, Napoli, Italy","institution_ids":["https://openalex.org/I71267560"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111944093","display_name":"\u00d6zlem \u00d6zbudak","orcid":null},"institutions":[{"id":"https://openalex.org/I48912391","display_name":"Istanbul Technical University","ror":"https://ror.org/059636586","country_code":"TR","type":"education","lineage":["https://openalex.org/I48912391"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"O. Ozbudak","raw_affiliation_strings":["Department of Electronics and Communication Engineering, Istanbul Technical University, Istanbul, Turkey","Istanbul Technical University, Department of Electronics and Communication Engineering, 34469, Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electronics and Communication Engineering, Istanbul Technical University, Istanbul, Turkey","institution_ids":["https://openalex.org/I48912391"]},{"raw_affiliation_string":"Istanbul Technical University, Department of Electronics and Communication Engineering, 34469, Turkey","institution_ids":["https://openalex.org/I48912391"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5091756907","display_name":"Alfredo Petrosino","orcid":"https://orcid.org/0000-0002-8736-1997"},"institutions":[{"id":"https://openalex.org/I183638586","display_name":"Parthenope University of Naples","ror":"https://ror.org/05pcv4v03","country_code":"IT","type":"education","lineage":["https://openalex.org/I183638586"]},{"id":"https://openalex.org/I71267560","display_name":"University of Naples Federico II","ror":"https://ror.org/05290cv24","country_code":"IT","type":"education","lineage":["https://openalex.org/I71267560"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"A. Petrosino","raw_affiliation_strings":["Department of Applied Science, University of Naples Parthenope, Napoli, Italy","University of Naples Parthenope, Department of Applied Science, Centro Direzionale Isola C4, 80133, Napoli, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Applied Science, University of Naples Parthenope, Napoli, Italy","institution_ids":["https://openalex.org/I183638586"]},{"raw_affiliation_string":"University of Naples Parthenope, Department of Applied Science, Centro Direzionale Isola C4, 80133, Napoli, Italy","institution_ids":["https://openalex.org/I71267560"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":"23","issue":null,"first_page":"222","last_page":"226"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9919999837875366,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9919999837875366,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10602","display_name":"Glycosylation and Glycoproteins Research","score":0.9746999740600586,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13326","display_name":"Biochemical and Structural Characterization","score":0.9685999751091003,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/motif","display_name":"Motif (music)","score":0.8148592710494995},{"id":"https://openalex.org/keywords/midpoint","display_name":"Midpoint","score":0.6944246888160706},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5941222310066223},{"id":"https://openalex.org/keywords/hough-transform","display_name":"Hough transform","score":0.574566125869751},{"id":"https://openalex.org/keywords/sss*","display_name":"SSS*","score":0.5394287109375},{"id":"https://openalex.org/keywords/voting","display_name":"Voting","score":0.493021696805954},{"id":"https://openalex.org/keywords/structural-motif","display_name":"Structural motif","score":0.4339074492454529},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4022132456302643},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.38648325204849243},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.348585844039917},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.24405479431152344},{"id":"https://openalex.org/keywords/geometry","display_name":"Geometry","score":0.1857425570487976},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08511045575141907}],"concepts":[{"id":"https://openalex.org/C32276052","wikidata":"https://www.wikidata.org/wiki/Q908349","display_name":"Motif (music)","level":2,"score":0.8148592710494995},{"id":"https://openalex.org/C34130140","wikidata":"https://www.wikidata.org/wiki/Q1645406","display_name":"Midpoint","level":2,"score":0.6944246888160706},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5941222310066223},{"id":"https://openalex.org/C200518788","wikidata":"https://www.wikidata.org/wiki/Q195076","display_name":"Hough transform","level":3,"score":0.574566125869751},{"id":"https://openalex.org/C148699463","wikidata":"https://www.wikidata.org/wiki/Q3492668","display_name":"SSS*","level":2,"score":0.5394287109375},{"id":"https://openalex.org/C520049643","wikidata":"https://www.wikidata.org/wiki/Q189760","display_name":"Voting","level":3,"score":0.493021696805954},{"id":"https://openalex.org/C132677234","wikidata":"https://www.wikidata.org/wiki/Q3273544","display_name":"Structural motif","level":2,"score":0.4339074492454529},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4022132456302643},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.38648325204849243},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.348585844039917},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.24405479431152344},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.1857425570487976},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08511045575141907},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/ipta.2012.6469525","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ipta.2012.6469525","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2012 3rd International Conference on Image Processing Theory, Tools and Applications (IPTA)","raw_type":"proceedings-article"},{"id":"pmh:oai:polen.itu.edu.tr:11527/52430","is_oa":false,"landing_page_url":"https://hdl.handle.net/11527/52430","pdf_url":null,"source":{"id":"https://openalex.org/S4306400460","display_name":"Istanbul Technical University Academic Open Archive (Istanbul Technical University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I48912391","host_organization_name":"Istanbul Technical University","host_organization_lineage":["https://openalex.org/I48912391"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:ricerca.uniparthenope.it:11367/30590","is_oa":false,"landing_page_url":"http://hdl.handle.net/11367/30590","pdf_url":null,"source":{"id":"https://openalex.org/S4377196432","display_name":"CINECA IRIS Institutial research information system (Parthenope University of Naples)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I183638586","host_organization_name":"Parthenope University of Naples","host_organization_lineage":["https://openalex.org/I183638586"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/conferenceObject"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W22745672","https://openalex.org/W1992124716","https://openalex.org/W1996945721","https://openalex.org/W2026141190","https://openalex.org/W2052081887","https://openalex.org/W2080231183","https://openalex.org/W2095178494","https://openalex.org/W2095905764","https://openalex.org/W2114317416","https://openalex.org/W2121236758","https://openalex.org/W2132653593","https://openalex.org/W2152024417","https://openalex.org/W2161773631","https://openalex.org/W2167120101","https://openalex.org/W6677411185","https://openalex.org/W7061399586"],"related_works":["https://openalex.org/W2372811972","https://openalex.org/W1953735743","https://openalex.org/W2142313107","https://openalex.org/W2368410102","https://openalex.org/W4400799920","https://openalex.org/W3021477453","https://openalex.org/W2364249514","https://openalex.org/W2610941444","https://openalex.org/W2132757463","https://openalex.org/W4288366168"],"abstract_inverted_index":{"This":[0,17],"paper":[1,135],"presents":[2],"an":[3],"approach":[4,163],"for":[5,140],"protein":[6,11,25],"motif":[7,70,79,115,146,167],"retrieval":[8,141],"founded":[9],"on":[10,32],"secondary":[12],"structures":[13],"(SSs)":[14],"in":[15,59,62,87],"3D.":[16],"is":[18,71,105,111,128,156,168],"a":[19,103,118],"new":[20,162],"way":[21],"to":[22,107,164,170],"analyze":[23],"the":[24,33,38,41,45,63,69,74,88,108,123,148,154,166],"3D":[26],"structure.":[27],"In":[28,133],"this":[29,134,161],"approach,":[30],"based":[31],"Generalized":[34],"Hough":[35],"Transform":[36],"(GHT),":[37],"primitives":[39],"are":[40,57,81,95],"triangles":[42,80,86],"defined":[43],"by":[44],"midpoints":[46],"of":[47,68,92,142],"three":[48,51],"SSs.":[49],"The":[50,66,90],"distances":[52],"between":[53],"each":[54],"SSs":[55],"couple":[56],"used":[58,96],"searching":[60],"and":[61,122,144,160,174],"voting":[64],"process.":[65],"barycenter":[67,116],"assigned":[72],"as":[73,97,114,130],"Reference":[75],"Point":[76],"(RP).":[77],"All":[78],"compared":[82],"with":[83,117,158],"all":[84],"possible":[85],"macromolecule.":[89,149],"lengths":[91],"triangle":[93],"edges":[94],"selective":[98],"parameters.":[99],"For":[100],"every":[101],"correspondence":[102],"vote":[104],"given":[106],"point":[109,124],"which":[110],"figured":[112],"out":[113],"special":[119],"mapping":[120],"rule":[121],"having":[125],"most":[126],"votes":[127],"determined":[129,157],"candidate":[131],"RP.":[132],"we":[136],"made":[137],"some":[138],"experiments":[139],"four-":[143],"five-SSs":[145],"from":[147],"Experimental":[150],"results":[151],"showed":[152],"that":[153],"RP":[155],"precision":[159],"retrieve":[165],"simple":[169],"implement,":[171],"computationally":[172],"efficient":[173],"fast.":[175]},"counts_by_year":[{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":2}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
