{"id":"https://openalex.org/W4289827988","doi":"https://doi.org/10.1109/ipdpsw55747.2022.00040","title":"Sequre: a high-performance framework for rapid development of secure bioinformatics pipelines","display_name":"Sequre: a high-performance framework for rapid development of secure bioinformatics pipelines","publication_year":2022,"publication_date":"2022-05-01","ids":{"openalex":"https://openalex.org/W4289827988","doi":"https://doi.org/10.1109/ipdpsw55747.2022.00040"},"language":"en","primary_location":{"id":"doi:10.1109/ipdpsw55747.2022.00040","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ipdpsw55747.2022.00040","pdf_url":null,"source":{"id":"https://openalex.org/S4363605440","display_name":"2022 IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5040613194","display_name":"Haris Smajlovi\u0107","orcid":"https://orcid.org/0000-0002-7722-5369"},"institutions":[{"id":"https://openalex.org/I212119943","display_name":"University of Victoria","ror":"https://ror.org/04s5mat29","country_code":"CA","type":"education","lineage":["https://openalex.org/I212119943"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Haris Smajlovic","raw_affiliation_strings":["University of Victoria,BC,Canada","University of Victoria, BC, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Victoria,BC,Canada","institution_ids":["https://openalex.org/I212119943"]},{"raw_affiliation_string":"University of Victoria, BC, Canada","institution_ids":["https://openalex.org/I212119943"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061029430","display_name":"Ariya Shajii","orcid":"https://orcid.org/0000-0002-6163-1848"},"institutions":[{"id":"https://openalex.org/I4210110987","display_name":"IIT@MIT","ror":"https://ror.org/01wp8zh54","country_code":"US","type":"facility","lineage":["https://openalex.org/I30771326","https://openalex.org/I4210110987"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ariya Shajii","raw_affiliation_strings":["MIT,Massachusetts,USA","MIT, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MIT,Massachusetts,USA","institution_ids":["https://openalex.org/I4210110987"]},{"raw_affiliation_string":"MIT, Massachusetts, USA","institution_ids":["https://openalex.org/I4210110987"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044078921","display_name":"Bonnie Berger","orcid":"https://orcid.org/0000-0002-2724-7228"},"institutions":[{"id":"https://openalex.org/I4210110987","display_name":"IIT@MIT","ror":"https://ror.org/01wp8zh54","country_code":"US","type":"facility","lineage":["https://openalex.org/I30771326","https://openalex.org/I4210110987"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bonnie Berger","raw_affiliation_strings":["MIT,Massachusetts,USA","MIT, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MIT,Massachusetts,USA","institution_ids":["https://openalex.org/I4210110987"]},{"raw_affiliation_string":"MIT, Massachusetts, USA","institution_ids":["https://openalex.org/I4210110987"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026909168","display_name":"Hyunghoon Cho","orcid":"https://orcid.org/0000-0002-2713-0150"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hyunghoon Cho","raw_affiliation_strings":["Broad Institute of MIT and Harvard,Massachusetts,USA","Broad Institute of MIT and Harvard, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Broad Institute of MIT and Harvard,Massachusetts,USA","institution_ids":["https://openalex.org/I107606265"]},{"raw_affiliation_string":"Broad Institute of MIT and Harvard, Massachusetts, USA","institution_ids":["https://openalex.org/I107606265"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060847860","display_name":"Ibrahim Numanagi\u0107","orcid":"https://orcid.org/0000-0002-2970-7937"},"institutions":[{"id":"https://openalex.org/I212119943","display_name":"University of Victoria","ror":"https://ror.org/04s5mat29","country_code":"CA","type":"education","lineage":["https://openalex.org/I212119943"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Ibrahim Numanagic","raw_affiliation_strings":["University of Victoria,BC,Canada","University of Victoria, BC, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Victoria,BC,Canada","institution_ids":["https://openalex.org/I212119943"]},{"raw_affiliation_string":"University of Victoria, BC, Canada","institution_ids":["https://openalex.org/I212119943"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.5061,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.63191049,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"164","last_page":"165"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10764","display_name":"Privacy-Preserving Technologies in Data","score":0.9901999831199646,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10764","display_name":"Privacy-Preserving Technologies in Data","score":0.9901999831199646,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10237","display_name":"Cryptography and Data Security","score":0.963100016117096,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9437999725341797,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/software-portability","display_name":"Software portability","score":0.7926114797592163},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7313648462295532},{"id":"https://openalex.org/keywords/health-insurance-portability-and-accountability-act","display_name":"Health Insurance Portability and Accountability Act","score":0.6965265274047852},{"id":"https://openalex.org/keywords/computer-security","display_name":"Computer security","score":0.5740874409675598},{"id":"https://openalex.org/keywords/secure-multi-party-computation","display_name":"Secure multi-party computation","score":0.4931127727031708},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.4707888960838318},{"id":"https://openalex.org/keywords/raw-data","display_name":"Raw data","score":0.464415967464447},{"id":"https://openalex.org/keywords/information-privacy","display_name":"Information privacy","score":0.4294179081916809},{"id":"https://openalex.org/keywords/cryptography","display_name":"Cryptography","score":0.3672142028808594},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3276202082633972},{"id":"https://openalex.org/keywords/confidentiality","display_name":"Confidentiality","score":0.13787192106246948}],"concepts":[{"id":"https://openalex.org/C63000827","wikidata":"https://www.wikidata.org/wiki/Q3080428","display_name":"Software portability","level":2,"score":0.7926114797592163},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7313648462295532},{"id":"https://openalex.org/C2778306010","wikidata":"https://www.wikidata.org/wiki/Q606563","display_name":"Health Insurance Portability and Accountability Act","level":3,"score":0.6965265274047852},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.5740874409675598},{"id":"https://openalex.org/C18396474","wikidata":"https://www.wikidata.org/wiki/Q2465888","display_name":"Secure multi-party computation","level":3,"score":0.4931127727031708},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.4707888960838318},{"id":"https://openalex.org/C132964779","wikidata":"https://www.wikidata.org/wiki/Q2110223","display_name":"Raw data","level":2,"score":0.464415967464447},{"id":"https://openalex.org/C123201435","wikidata":"https://www.wikidata.org/wiki/Q456632","display_name":"Information privacy","level":2,"score":0.4294179081916809},{"id":"https://openalex.org/C178489894","wikidata":"https://www.wikidata.org/wiki/Q8789","display_name":"Cryptography","level":2,"score":0.3672142028808594},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3276202082633972},{"id":"https://openalex.org/C71745522","wikidata":"https://www.wikidata.org/wiki/Q2476929","display_name":"Confidentiality","level":2,"score":0.13787192106246948},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/ipdpsw55747.2022.00040","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ipdpsw55747.2022.00040","pdf_url":null,"source":{"id":"https://openalex.org/S4363605440","display_name":"2022 IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W107105315","https://openalex.org/W1584537303","https://openalex.org/W4388155270","https://openalex.org/W1872724644","https://openalex.org/W4367156293","https://openalex.org/W2750549761","https://openalex.org/W28826848","https://openalex.org/W2122272819","https://openalex.org/W4301229064","https://openalex.org/W2979068396"],"abstract_inverted_index":{"Genomic":[0],"data":[1,25,57,96,100,105],"leaks":[2],"are":[3,127],"irreversible.":[4],"Leaked":[5],"DNA":[6],"cannot":[7],"be":[8,74],"changed,":[9],"stays":[10],"disclosed":[11],"indefinitely,":[12],"and":[13,40,106,143],"affects":[14],"the":[15,30,36,48,54,78,99,104],"owner's":[16],"family":[17],"members":[18],"as":[19,84,140],"well.":[20],"The":[21],"recent":[22],"large-scale":[23],"genomic":[24],"collections":[26],"[1],":[27],"[2]":[28],"render":[29],"traditional":[31],"privacy":[32],"protection":[33,46],"mechanisms,":[34],"like":[35],"Health":[37],"Insurance":[38],"Portability":[39],"Accountability":[41],"Act":[42],"(HIPAA),":[43],"inadequate":[44],"for":[45],"against":[47],"novel":[49],"security":[50],"attacks":[51],"[3].":[52],"On":[53],"other":[55],"hand,":[56],"access":[58],"restrictions":[59],"hinder":[60],"important":[61],"clinical":[62],"research":[63,145],"that":[64,133],"requires":[65],"large":[66],"datasets":[67,137],"to":[68,116],"operate":[69,134],"[4].":[70],"These":[71],"concerns":[72],"can":[73],"naturally":[75],"addressed":[76],"by":[77,102],"employment":[79],"of":[80],"privacy-enhancing":[81],"technologies,":[82],"such":[83,139],"a":[85,113],"secure":[86],"multiparty":[87],"computation":[88,94,107],"(MPC)":[89],"[5]\u2013[10].":[90],"Secure":[91],"MPC":[92,125],"enables":[93],"on":[95,135],"without":[97],"disclosing":[98],"itself":[101],"dividing":[103],"between":[108],"multiple":[109],"computing":[110,119],"parties":[111,120],"in":[112,131],"distributed":[114],"manner":[115],"prevent":[117],"individual":[118],"from":[121],"accessing":[122],"raw":[123],"data.":[124],"systems":[126],"being":[128],"increasingly":[129],"adopted":[130],"fields":[132],"sensitive":[136],"[11]\u2013[13],":[138],"computational":[141],"genomics":[142],"biomedical":[144],"[14]\u2013[22].":[146]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
