{"id":"https://openalex.org/W3148705814","doi":"https://doi.org/10.1109/ipdps.2006.1639297","title":"Grid solutions for biological and physical cross-site simulations on the TeraGrid","display_name":"Grid solutions for biological and physical cross-site simulations on the TeraGrid","publication_year":2006,"publication_date":"2006-01-01","ids":{"openalex":"https://openalex.org/W3148705814","doi":"https://doi.org/10.1109/ipdps.2006.1639297","mag":"3148705814"},"language":"en","primary_location":{"id":"doi:10.1109/ipdps.2006.1639297","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ipdps.2006.1639297","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings 20th IEEE International Parallel & Distributed Processing Symposium","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5019812377","display_name":"Suchuan Dong","orcid":"https://orcid.org/0000-0001-6778-0679"},"institutions":[{"id":"https://openalex.org/I27804330","display_name":"Brown University","ror":"https://ror.org/05gq02987","country_code":"US","type":"education","lineage":["https://openalex.org/I27804330"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"S. Dong","raw_affiliation_strings":["Division of Applied Mathematics, Brown University, Providence, RI, USA"],"affiliations":[{"raw_affiliation_string":"Division of Applied Mathematics, Brown University, Providence, RI, USA","institution_ids":["https://openalex.org/I27804330"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061393608","display_name":"Nicholas T. Karonis","orcid":"https://orcid.org/0000-0002-0858-5950"},"institutions":[{"id":"https://openalex.org/I1282105669","display_name":"Argonne National Laboratory","ror":"https://ror.org/05gvnxz63","country_code":"US","type":"facility","lineage":["https://openalex.org/I1282105669","https://openalex.org/I1330989302","https://openalex.org/I39565521","https://openalex.org/I40347166"]},{"id":"https://openalex.org/I102502594","display_name":"Northern Illinois University","ror":"https://ror.org/012wxa772","country_code":"US","type":"education","lineage":["https://openalex.org/I102502594"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"N.T. Karonis","raw_affiliation_strings":["Department of Computer Science, Northern Illinois University, Dekalb, IL, USA","Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, IL, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Northern Illinois University, Dekalb, IL, USA","institution_ids":["https://openalex.org/I102502594"]},{"raw_affiliation_string":"Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, IL, USA","institution_ids":["https://openalex.org/I1282105669"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5009658255","display_name":"George Em Karniadakis","orcid":"https://orcid.org/0000-0002-9713-7120"},"institutions":[{"id":"https://openalex.org/I27804330","display_name":"Brown University","ror":"https://ror.org/05gq02987","country_code":"US","type":"education","lineage":["https://openalex.org/I27804330"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"G.E. Karniadakis","raw_affiliation_strings":["Division of Applied Mathematics, Brown University, Providence, RI, USA"],"affiliations":[{"raw_affiliation_string":"Division of Applied Mathematics, Brown University, Providence, RI, USA","institution_ids":["https://openalex.org/I27804330"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5019812377"],"corresponding_institution_ids":["https://openalex.org/I27804330"],"apc_list":null,"apc_paid":null,"fwci":1.8153,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.87738887,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"43","issue":null,"first_page":"10 pp.","last_page":"10 pp."},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10054","display_name":"Parallel Computing and Optimization Techniques","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1708","display_name":"Hardware and Architecture"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10829","display_name":"Interconnection Networks and Systems","score":0.9872999787330627,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.861609935760498},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8152874708175659},{"id":"https://openalex.org/keywords/grid-computing","display_name":"Grid computing","score":0.7939896583557129},{"id":"https://openalex.org/keywords/grid","display_name":"Grid","score":0.7706804275512695},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.7440217137336731},{"id":"https://openalex.org/keywords/middleware","display_name":"Middleware (distributed applications)","score":0.6136714220046997},{"id":"https://openalex.org/keywords/supercomputer","display_name":"Supercomputer","score":0.4968717396259308},{"id":"https://openalex.org/keywords/computational-science","display_name":"Computational science","score":0.43789979815483093},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.4201869070529938},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.2551237642765045}],"concepts":[{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.861609935760498},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8152874708175659},{"id":"https://openalex.org/C70429105","wikidata":"https://www.wikidata.org/wiki/Q249999","display_name":"Grid computing","level":3,"score":0.7939896583557129},{"id":"https://openalex.org/C187691185","wikidata":"https://www.wikidata.org/wiki/Q2020720","display_name":"Grid","level":2,"score":0.7706804275512695},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.7440217137336731},{"id":"https://openalex.org/C169468491","wikidata":"https://www.wikidata.org/wiki/Q146923","display_name":"Middleware (distributed applications)","level":2,"score":0.6136714220046997},{"id":"https://openalex.org/C83283714","wikidata":"https://www.wikidata.org/wiki/Q121117","display_name":"Supercomputer","level":2,"score":0.4968717396259308},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.43789979815483093},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.4201869070529938},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.2551237642765045},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/ipdps.2006.1639297","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ipdps.2006.1639297","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings 20th IEEE International Parallel & Distributed Processing Symposium","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.5,"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W1509926350","https://openalex.org/W1537879423","https://openalex.org/W1902164615","https://openalex.org/W1953787672","https://openalex.org/W1993717328","https://openalex.org/W2003500264","https://openalex.org/W2008415634","https://openalex.org/W2013141599","https://openalex.org/W2018873422","https://openalex.org/W2019061535","https://openalex.org/W2064612351","https://openalex.org/W2069591318","https://openalex.org/W2070232376","https://openalex.org/W2077783617","https://openalex.org/W2081651178","https://openalex.org/W2097116331","https://openalex.org/W2116659056","https://openalex.org/W2151911540","https://openalex.org/W2995054086","https://openalex.org/W3208691782","https://openalex.org/W4212789472","https://openalex.org/W6631970537","https://openalex.org/W6674655373"],"related_works":["https://openalex.org/W2384867379","https://openalex.org/W3214280620","https://openalex.org/W2329539859","https://openalex.org/W3191490922","https://openalex.org/W2227905990","https://openalex.org/W2149470664","https://openalex.org/W2162974494","https://openalex.org/W1582436825","https://openalex.org/W1996803181","https://openalex.org/W2023656250"],"abstract_inverted_index":{"Computational":[0],"grids":[1],"and":[2,9,12,54,86,94,117],"grid":[3,39,63],"middleware":[4],"offer":[5],"unprecedented":[6],"computational":[7,31,71],"power":[8],"storage":[10],"capacity,":[11],"thus,":[13],"have":[14],"opened":[15],"the":[16,28,36,49,75,90,98],"possibility":[17],"of":[18,38,52,77,100,121],"solving":[19],"problems":[20,69],"that":[21,41],"was":[22],"previously":[23],"not":[24],"possible":[25],"on":[26,89],"even":[27],"largest":[29],"single":[30],"resources.":[32],"These":[33],"opportunities":[34],"notwithstanding,":[35],"development":[37],"applications":[40,85,110],"run":[42,112],"efficiently":[43],"remains":[44],"a":[45,119],"challenge":[46,68],"due":[47],"to":[48,65],"inherent":[50,57],"heterogeneity":[51],"networks":[53],"system":[55],"architectures":[56],"in":[58,70,108],"such":[59],"environments.":[60],"We":[61,96],"present":[62,97],"solutions":[64,79],"two":[66],"grand":[67],"mechanics.":[72],"To":[73],"study":[74,102],"scalability":[76,107],"our":[78,101],"we":[80],"implemented":[81],"both":[82,109],"as":[83],"MPI":[84],"ran":[87],"them":[88],"TeraGrid":[91,115],"using":[92],"NEKTAR":[93],"MPICH-G2.":[95],"results":[99],"which":[103],"demonstrate":[104],"near":[105],"linear":[106],"when":[111],"across":[113],"multiple":[114],"sites":[116],"at":[118],"scale":[120],"hundreds":[122],"or":[123],"processors":[124]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}