{"id":"https://openalex.org/W4283209307","doi":"https://doi.org/10.1109/infocomwkshps54753.2022.9798223","title":"Enabling Large-Scale Human Genome Sequence Analysis on CloudLab","display_name":"Enabling Large-Scale Human Genome Sequence Analysis on CloudLab","publication_year":2022,"publication_date":"2022-05-02","ids":{"openalex":"https://openalex.org/W4283209307","doi":"https://doi.org/10.1109/infocomwkshps54753.2022.9798223"},"language":"en","primary_location":{"id":"doi:10.1109/infocomwkshps54753.2022.9798223","is_oa":false,"landing_page_url":"https://doi.org/10.1109/infocomwkshps54753.2022.9798223","pdf_url":null,"source":{"id":"https://openalex.org/S4363607985","display_name":"IEEE INFOCOM 2022 - IEEE Conference on Computer Communications Workshops (INFOCOM WKSHPS)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE INFOCOM 2022 - IEEE Conference on Computer Communications Workshops (INFOCOM WKSHPS)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5087950601","display_name":"Praveen Rao","orcid":"https://orcid.org/0000-0002-1859-0438"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Praveen Rao","raw_affiliation_strings":["University of Missouri-Columbia,Columbia,MO,USA","University of Missouri-Columbia, Columbia, MO, USA"],"affiliations":[{"raw_affiliation_string":"University of Missouri-Columbia,Columbia,MO,USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"University of Missouri-Columbia, Columbia, MO, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5059478823","display_name":"Arun Zachariah","orcid":"https://orcid.org/0000-0002-5608-9089"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Arun Zachariah","raw_affiliation_strings":["University of Missouri-Columbia,Columbia,MO,USA","University of Missouri-Columbia, Columbia, MO, USA"],"affiliations":[{"raw_affiliation_string":"University of Missouri-Columbia,Columbia,MO,USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"University of Missouri-Columbia, Columbia, MO, USA","institution_ids":["https://openalex.org/I76835614"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5087950601"],"corresponding_institution_ids":["https://openalex.org/I76835614"],"apc_list":null,"apc_paid":null,"fwci":0.6479,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.56298665,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"8","issue":null,"first_page":"1","last_page":"2"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11181","display_name":"Advanced Data Storage Technologies","score":0.992900013923645,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11181","display_name":"Advanced Data Storage Technologies","score":0.992900013923645,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.986299991607666,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9825999736785889,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7054318189620972},{"id":"https://openalex.org/keywords/human-genome","display_name":"Human genome","score":0.6790810227394104},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.6380792856216431},{"id":"https://openalex.org/keywords/speedup","display_name":"Speedup","score":0.6091693043708801},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5956436991691589},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5146239995956421},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.45656049251556396},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.4525472819805145},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.35061222314834595},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1829437017440796},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.12530097365379333},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.12061408162117004},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.09768033027648926},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.0811510980129242}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7054318189620972},{"id":"https://openalex.org/C197077220","wikidata":"https://www.wikidata.org/wiki/Q720988","display_name":"Human genome","level":4,"score":0.6790810227394104},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.6380792856216431},{"id":"https://openalex.org/C68339613","wikidata":"https://www.wikidata.org/wiki/Q1549489","display_name":"Speedup","level":2,"score":0.6091693043708801},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5956436991691589},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5146239995956421},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.45656049251556396},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.4525472819805145},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.35061222314834595},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1829437017440796},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.12530097365379333},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.12061408162117004},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.09768033027648926},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0811510980129242},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/infocomwkshps54753.2022.9798223","is_oa":false,"landing_page_url":"https://doi.org/10.1109/infocomwkshps54753.2022.9798223","pdf_url":null,"source":{"id":"https://openalex.org/S4363607985","display_name":"IEEE INFOCOM 2022 - IEEE Conference on Computer Communications Workshops (INFOCOM WKSHPS)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE INFOCOM 2022 - IEEE Conference on Computer Communications Workshops (INFOCOM WKSHPS)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":13,"referenced_works":["https://openalex.org/W1598064945","https://openalex.org/W1983587324","https://openalex.org/W1989017925","https://openalex.org/W2104846587","https://openalex.org/W2189465200","https://openalex.org/W2302703011","https://openalex.org/W2396849069","https://openalex.org/W2872276844","https://openalex.org/W2951501862","https://openalex.org/W2953498285","https://openalex.org/W3211269552","https://openalex.org/W6687322159","https://openalex.org/W6764791836"],"related_works":["https://openalex.org/W2058965144","https://openalex.org/W2164382479","https://openalex.org/W2146343568","https://openalex.org/W98480971","https://openalex.org/W2150291671","https://openalex.org/W2013643406","https://openalex.org/W2027972911","https://openalex.org/W2157978810","https://openalex.org/W1969895229","https://openalex.org/W2108497208"],"abstract_inverted_index":{"Human":[0],"genome":[1,25,33],"sequences":[2],"are":[3],"very":[4],"large":[5],"in":[6,75],"size":[7],"and":[8,12,45,57,73,77],"require":[9],"significant":[10],"compute":[11],"storage":[13],"resources":[14],"for":[15,30,70],"largescale":[16],"analysis.":[17],"Motivated":[18],"by":[19],"the":[20,40,46,54],"need":[21],"to":[22],"speedup":[23],"human":[24,32],"processing,":[26],"we":[27],"developed":[28],"software":[29,44,64],"large-scale":[31],"sequence":[34],"analysis":[35],"on":[36,49],"CloudLab.":[37,50],"We":[38,51],"present":[39],"design":[41],"of":[42],"our":[43,61],"experimental":[47],"setup":[48],"also":[52],"discuss":[53],"insights":[55],"gained":[56],"lessons":[58],"learned":[59],"through":[60],"effort.":[62],"Our":[63],"can":[65],"be":[66],"a":[67],"valuable":[68],"resource":[69],"researchers,":[71],"educators,":[72],"students":[74],"computing":[76],"bioinformatics.":[78]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
